RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 NPY4RP50391 375 aa7.9□□□□□ -1.14
SDCCAG3-208ENST00000466579 GBX2P52951 348 aaPredicted RBP7.9□□□□□ -1.14
SDCCAG3-208ENST00000466579 SEC61A1P61619 476 aaKnown RBP7.9□□□□□ -1.14
SDCCAG3-208ENST00000466579 UBE2V2Q15819 145 aa7.9□□□□□ -1.14
SDCCAG3-208ENST00000466579 CHRFAM7AQ494W8 412 aa7.9□□□□□ -1.14
SDCCAG3-208ENST00000466579 CEP78Q5JTW2 689 aa7.9□□□□□ -1.14
SDCCAG3-208ENST00000466579 RNLSQ5VYX0 342 aa7.9□□□□□ -1.14
SDCCAG3-208ENST00000466579 PLCXD3Q63HM9 321 aa7.9□□□□□ -1.14
SDCCAG3-208ENST00000466579 LYPD2Q6UXB3 125 aa7.9□□□□□ -1.14
SDCCAG3-208ENST00000466579 MOB3CQ70IA8 216 aa7.9□□□□□ -1.14
SDCCAG3-208ENST00000466579 UTS2BQ765I0 119 aa7.9□□□□□ -1.14
SDCCAG3-208ENST00000466579 FAM90A1Q86YD7 464 aa7.9□□□□□ -1.14
SDCCAG3-208ENST00000466579 RDH10Q8IZV5 341 aa7.9□□□□□ -1.14
SDCCAG3-208ENST00000466579 DNAAF1Q8NEP3 725 aa7.9□□□□□ -1.14
SDCCAG3-208ENST00000466579 OR52N1Q8NH53 320 aa7.9□□□□□ -1.14
SDCCAG3-208ENST00000466579 AQP3Q92482 292 aa7.9□□□□□ -1.14
SDCCAG3-208ENST00000466579 RPL3LQ92901 407 aaKnown RBP7.9□□□□□ -1.14
SDCCAG3-208ENST00000466579 ANKRD60Q9BZ19 345 aa7.9□□□□□ -1.14
SDCCAG3-208ENST00000466579 DNTTIP1Q9H147 329 aa7.9□□□□□ -1.14
SDCCAG3-208ENST00000466579 METTL17Q9H7H0 456 aaPredicted RBP7.9□□□□□ -1.14
SDCCAG3-208ENST00000466579 GPR173Q9NS66 373 aa7.9□□□□□ -1.14
SDCCAG3-208ENST00000466579 ERVK-18Q9QC07 812 aa7.9□□□□□ -1.14
SDCCAG3-208ENST00000466579 CTSZQ9UBR2 303 aa7.9□□□□□ -1.14
SDCCAG3-208ENST00000466579 HHLA2Q9UM44 414 aa7.9□□□□□ -1.14
SDCCAG3-208ENST00000466579 A0A0G2JMP0 313 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 A0A0X1KG70 313 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 hCG_1807616A0A1W2PRN6 198 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 C3orf80F5H4A9 247 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 H0YHG0 523 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 J3QT63 122 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 OGG1O15527 345 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 XPNPEP2O43895 674 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 FCN3O75636 299 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 GATBO75879 557 aaKnown RBP7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 ALX3O95076 343 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 FSHBP01225 129 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 MT-ND2P03891 347 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 RPS2P15880 293 aaKnown RBP7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 MYL12AP19105 171 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 HNF1AP20823 631 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 HSPA13P48723 471 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 PITPNBP48739 271 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 ST3GAL4Q11206 333 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 MICBQ29980 383 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 ODF4Q2M2E3 257 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 ESCO2Q56NI9 601 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 C6orf141Q5SZD1 244 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 WDR25Q64LD2 544 aaPredicted RBP7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 STUMQ69YW2 141 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 SFRP4Q6FHJ7 346 aaPredicted RBP7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 RPL22L1Q6P5R6 122 aaKnown RBP7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 TMPRSS11AQ6ZMR5 421 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 C1orf229Q6ZS94 237 aaPredicted RBP7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 NLRC3Q7RTR2 1065 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 PRIMA1Q86XR5 153 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 ZNF573Q86YE8 665 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 POC1AQ8NBT0 407 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 C19orf18Q8NEA5 215 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 OR4M2Q8NGB6 313 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 OR8B3Q8NGG8 313 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 OR10AC1Q8NH08 325 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 ZNF671Q8TAW3 534 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 ADAT3Q96EY9 351 aaPredicted RBP7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 OR8B2Q96RD0 313 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 SSBP3Q9BWW4 388 aaPredicted RBP7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 BEX2Q9BXY8 128 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 TMPRSS13Q9BYE2 586 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 PKIBQ9C010 78 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 SHARPINQ9H0F6 387 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 LPAR2Q9HBW0 351 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 HES4Q9HCC6 221 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 BABAM2Q9NXR7 383 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 RASL12Q9NYN1 266 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 OPN4Q9UHM6 478 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 CLEC2DQ9UHP7 191 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 INSIG2Q9Y5U4 225 aa7.89□□□□□ -1.15
SDCCAG3-208ENST00000466579 JMJD1CQ15652 2540 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 IGKV1-27A0A075B6S5 117 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 IGKV1-9A0A0C4DH69 117 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 A6NIN4 97 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 PHF1O43189 567 aaPredicted RBP7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 RHBDL1O75783 438 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 SERPINA3P01011 423 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 AVPP01185 164 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 CD1AP06126 327 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 PGA5P0DJD9 388 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 PPIAL4GP0DN37 164 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 AMY2BP19961 511 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 FUT6P51993 359 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 GTF2A1P52655 376 aaPredicted RBP7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 ERVK11-1P61568 191 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 GNB2P62879 340 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 LCN2P80188 198 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 PAX8Q06710 450 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 IL24Q13007 206 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 MED21Q13503 144 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 CDK5R1Q15078 307 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 TUSC1Q2TAM9 212 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 OR2G6Q5TZ20 316 aa7.88□□□□□ -1.15
SDCCAG3-208ENST00000466579 DCAF12L2Q5VW00 463 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms