RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 GABRA5P31644 462 aa16.75■□□□□ 0.27
COL6A1-203ENST00000466285 TGFBR2P37173 567 aa16.75■□□□□ 0.27
COL6A1-203ENST00000466285 BMXP51813 675 aa16.75■□□□□ 0.27
COL6A1-203ENST00000466285 EFNB2P52799 333 aa16.75■□□□□ 0.27
COL6A1-203ENST00000466285 C2orf68Q2NKX9 166 aa16.75■□□□□ 0.27
COL6A1-203ENST00000466285 LYG1Q8N1E2 194 aa16.75■□□□□ 0.27
COL6A1-203ENST00000466285 C11orf42Q8N5U0 333 aa16.75■□□□□ 0.27
COL6A1-203ENST00000466285 CD177Q8N6Q3 437 aa16.75■□□□□ 0.27
COL6A1-203ENST00000466285 NPRL2Q8WTW4 380 aa16.75■□□□□ 0.27
COL6A1-203ENST00000466285 AQP3Q92482 292 aa16.75■□□□□ 0.27
COL6A1-203ENST00000466285 SSX3Q99909 188 aa16.75■□□□□ 0.27
COL6A1-203ENST00000466285 CHID1Q9BWS9 393 aa16.75■□□□□ 0.27
COL6A1-203ENST00000466285 CAB39Q9Y376 341 aaPredicted RBP16.75■□□□□ 0.27
COL6A1-203ENST00000466285 MEX3AA1L020 520 aaKnown RBP16.74■□□□□ 0.27
COL6A1-203ENST00000466285 ANKRD61A6NGH8 418 aa16.74■□□□□ 0.27
COL6A1-203ENST00000466285 CST1P01037 141 aa16.74■□□□□ 0.27
COL6A1-203ENST00000466285 IGLV3-1P01715 115 aa16.74■□□□□ 0.27
COL6A1-203ENST00000466285 RAP2AP10114 183 aa16.74■□□□□ 0.27
COL6A1-203ENST00000466285 CCL3L1P16619 93 aa16.74■□□□□ 0.27
COL6A1-203ENST00000466285 BEAN1Q3B7T3 259 aa16.74■□□□□ 0.27
COL6A1-203ENST00000466285 HAGHLQ6PII5 290 aaPredicted RBP16.74■□□□□ 0.27
COL6A1-203ENST00000466285 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.74■□□□□ 0.27
COL6A1-203ENST00000466285 DYNAPQ8N1N2 210 aa16.74■□□□□ 0.27
COL6A1-203ENST00000466285 ZNF454Q8N9F8 522 aa16.74■□□□□ 0.27
COL6A1-203ENST00000466285 OR5R1Q8NH85 324 aa16.74■□□□□ 0.27
COL6A1-203ENST00000466285 MED30Q96HR3 178 aa16.74■□□□□ 0.27
COL6A1-203ENST00000466285 DMRTB1Q96MA1 342 aa16.74■□□□□ 0.27
COL6A1-203ENST00000466285 GPR84Q9NQS5 396 aa16.74■□□□□ 0.27
COL6A1-203ENST00000466285 ARRDC5A6NEK1 342 aa16.73■□□□□ 0.27
COL6A1-203ENST00000466285 MAGEB4O15481 346 aaPredicted RBP16.73■□□□□ 0.27
COL6A1-203ENST00000466285 PRODHO43272 600 aa16.73■□□□□ 0.27
COL6A1-203ENST00000466285 CSF1P09603 554 aa16.73■□□□□ 0.27
COL6A1-203ENST00000466285 PAICSP22234 425 aaKnown RBP16.73■□□□□ 0.27
COL6A1-203ENST00000466285 CDK5Q00535 292 aa16.73■□□□□ 0.27
COL6A1-203ENST00000466285 APOFQ13790 326 aa16.73■□□□□ 0.27
COL6A1-203ENST00000466285 HABP2Q14520 560 aaPredicted RBP16.73■□□□□ 0.27
COL6A1-203ENST00000466285 ZNF273Q14593 569 aa16.73■□□□□ 0.27
COL6A1-203ENST00000466285 NCR3LG1Q68D85 454 aa16.73■□□□□ 0.27
COL6A1-203ENST00000466285 KRT74Q7RTS7 529 aa16.73■□□□□ 0.27
COL6A1-203ENST00000466285 FTMTQ8N4E7 242 aa16.73■□□□□ 0.27
COL6A1-203ENST00000466285 KLHDC1Q8N7A1 406 aa16.73■□□□□ 0.27
COL6A1-203ENST00000466285 FAM81AQ8TBF8 368 aa16.73■□□□□ 0.27
COL6A1-203ENST00000466285 OR51E1Q8TCB6 317 aa16.73■□□□□ 0.27
COL6A1-203ENST00000466285 PIFOQ8TCI5 191 aa16.73■□□□□ 0.27
COL6A1-203ENST00000466285 CANT1Q8WVQ1 401 aa16.73■□□□□ 0.27
COL6A1-203ENST00000466285 SDSLQ96GA7 329 aa16.73■□□□□ 0.27
COL6A1-203ENST00000466285 TEAD3Q99594 435 aa16.73■□□□□ 0.27
COL6A1-203ENST00000466285 MUC13Q9H3R2 512 aa16.73■□□□□ 0.27
COL6A1-203ENST00000466285 FBLN5Q9UBX5 448 aa16.73■□□□□ 0.27
COL6A1-203ENST00000466285 H0YAE9 185 aa16.72■□□□□ 0.27
COL6A1-203ENST00000466285 MTRF1O75570 445 aaKnown RBP16.72■□□□□ 0.27
COL6A1-203ENST00000466285 COX7A1P24310 79 aa16.72■□□□□ 0.27
COL6A1-203ENST00000466285 RPS7P62081 194 aaKnown RBP16.72■□□□□ 0.27
COL6A1-203ENST00000466285 GNG3P63215 75 aa16.72■□□□□ 0.27
COL6A1-203ENST00000466285 ACSM1Q08AH1 577 aa16.72■□□□□ 0.27
COL6A1-203ENST00000466285 CEACAM21Q3KPI0 293 aa16.72■□□□□ 0.27
COL6A1-203ENST00000466285 PLA1AQ53H76 456 aa16.72■□□□□ 0.27
COL6A1-203ENST00000466285 LDLRAD2Q5SZI1 272 aa16.72■□□□□ 0.27
COL6A1-203ENST00000466285 PLEKHG7Q6ZR37 379 aa16.72■□□□□ 0.27
COL6A1-203ENST00000466285 MOB3CQ70IA8 216 aa16.72■□□□□ 0.27
COL6A1-203ENST00000466285 BCDIN3DQ7Z5W3 292 aaKnown RBP16.72■□□□□ 0.27
COL6A1-203ENST00000466285 THAP5Q7Z6K1 395 aa16.72■□□□□ 0.27
COL6A1-203ENST00000466285 KRT77Q7Z794 578 aa16.72■□□□□ 0.27
COL6A1-203ENST00000466285 LHFPL4Q7Z7J7 247 aa16.72■□□□□ 0.27
COL6A1-203ENST00000466285 OR4M1Q8NGD0 313 aa16.72■□□□□ 0.27
COL6A1-203ENST00000466285 ASB9Q96DX5 294 aa16.72■□□□□ 0.27
COL6A1-203ENST00000466285 NSL1Q96IY1 281 aa16.72■□□□□ 0.27
COL6A1-203ENST00000466285 PBOV1Q9GZY1 135 aa16.72■□□□□ 0.27
COL6A1-203ENST00000466285 SRSF10O75494 262 aaKnown RBP16.71■□□□□ 0.27
COL6A1-203ENST00000466285 OSMP13725 252 aa16.71■□□□□ 0.27
COL6A1-203ENST00000466285 HERPUD1Q15011 391 aa16.71■□□□□ 0.27
COL6A1-203ENST00000466285 LRRC75BQ2VPJ9 315 aa16.71■□□□□ 0.27
COL6A1-203ENST00000466285 PLCXD3Q63HM9 321 aa16.71■□□□□ 0.27
COL6A1-203ENST00000466285 ZNF782Q6ZMW2 699 aaPredicted RBP16.71■□□□□ 0.27
COL6A1-203ENST00000466285 ACP7Q6ZNF0 438 aa16.71■□□□□ 0.27
COL6A1-203ENST00000466285 OR51G2Q8NGK0 314 aa16.71■□□□□ 0.27
COL6A1-203ENST00000466285 ABCB9Q9NP78 766 aa16.71■□□□□ 0.27
COL6A1-203ENST00000466285 LAMP5Q9UJQ1 280 aa16.71■□□□□ 0.27
COL6A1-203ENST00000466285 A0A0U1RQV5 110 aa16.7■□□□□ 0.26
COL6A1-203ENST00000466285 TMEM269A0A1B0GVZ9 245 aa16.7■□□□□ 0.26
COL6A1-203ENST00000466285 A6NIN4 97 aa16.7■□□□□ 0.26
COL6A1-203ENST00000466285 RFPL4AA6NLU0 287 aa16.7■□□□□ 0.26
COL6A1-203ENST00000466285 RFPL4AL1F8VTS6 287 aa16.7■□□□□ 0.26
COL6A1-203ENST00000466285 TTRP02766 147 aa16.7■□□□□ 0.26
COL6A1-203ENST00000466285 JUNBP17275 347 aaPredicted RBP16.7■□□□□ 0.26
COL6A1-203ENST00000466285 CAPZA1P52907 286 aa16.7■□□□□ 0.26
COL6A1-203ENST00000466285 SNCBQ16143 134 aa16.7■□□□□ 0.26
COL6A1-203ENST00000466285 SAMD5Q5TGI4 173 aa16.7■□□□□ 0.26
COL6A1-203ENST00000466285 TMEM200BQ69YZ2 307 aa16.7■□□□□ 0.26
COL6A1-203ENST00000466285 COMMD2Q86X83 199 aa16.7■□□□□ 0.26
COL6A1-203ENST00000466285 POC1AQ8NBT0 407 aa16.7■□□□□ 0.26
COL6A1-203ENST00000466285 CFHR4Q92496 578 aa16.7■□□□□ 0.26
COL6A1-203ENST00000466285 SLC25A19Q9HC21 320 aa16.7■□□□□ 0.26
COL6A1-203ENST00000466285 GPR173Q9NS66 373 aa16.7■□□□□ 0.26
COL6A1-203ENST00000466285 PIGLQ9Y2B2 252 aa16.7■□□□□ 0.26
COL6A1-203ENST00000466285 TRBV23-1A0A0A0MS06 115 aa16.69■□□□□ 0.26
COL6A1-203ENST00000466285 MAP2K3P46734 347 aa16.69■□□□□ 0.26
COL6A1-203ENST00000466285 SLC35D3Q5M8T2 416 aa16.69■□□□□ 0.26
COL6A1-203ENST00000466285 ARHGAP24Q8N264 748 aa16.69■□□□□ 0.26
COL6A1-203ENST00000466285 OR8B4Q96RC9 309 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms