RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 CCL19Q99731 98 aa9.43□□□□□ -0.9
VCP-204ENST00000466100 OR51I2Q9H344 312 aa9.43□□□□□ -0.9
VCP-204ENST00000466100 TCF7L1Q9HCS4 588 aa9.43□□□□□ -0.9
VCP-204ENST00000466100 ZNF701Q9NV72 531 aaPredicted RBP9.43□□□□□ -0.9
VCP-204ENST00000466100 SLC7A11Q9UPY5 501 aa9.43□□□□□ -0.9
VCP-204ENST00000466100 PMF1-BGLAPU3KQ54 211 aa9.43□□□□□ -0.9
VCP-204ENST00000466100 SMIM31A0A1B0GVY4 71 aa9.42□□□□□ -0.9
VCP-204ENST00000466100 LRP5LA4QPB2 252 aa9.42□□□□□ -0.9
VCP-204ENST00000466100 MEGF11A6BM72 1044 aa9.42□□□□□ -0.9
VCP-204ENST00000466100 A6NHS1 94 aa9.42□□□□□ -0.9
VCP-204ENST00000466100 TRIM64BA6NI03 449 aa9.42□□□□□ -0.9
VCP-204ENST00000466100 H3BMQ9 156 aa9.42□□□□□ -0.9
VCP-204ENST00000466100 J3QT63 122 aa9.42□□□□□ -0.9
VCP-204ENST00000466100 ZNF701M0R085 212 aaPredicted RBP9.42□□□□□ -0.9
VCP-204ENST00000466100 HPXP02790 462 aa9.42□□□□□ -0.9
VCP-204ENST00000466100 ERCC1P07992 297 aaPredicted RBP9.42□□□□□ -0.9
VCP-204ENST00000466100 HCKP08631 526 aa9.42□□□□□ -0.9
VCP-204ENST00000466100 CLEC2LP0C7M8 214 aa9.42□□□□□ -0.9
VCP-204ENST00000466100 BMP4P12644 408 aa9.42□□□□□ -0.9
VCP-204ENST00000466100 TNFSF4P23510 183 aa9.42□□□□□ -0.9
VCP-204ENST00000466100 MYL9P24844 172 aa9.42□□□□□ -0.9
VCP-204ENST00000466100 PMELP40967 661 aa9.42□□□□□ -0.9
VCP-204ENST00000466100 SRP9P49458 86 aaKnown RBP9.42□□□□□ -0.9
VCP-204ENST00000466100 RBP2P50120 134 aa9.42□□□□□ -0.9
VCP-204ENST00000466100 OR10A3P58181 314 aa9.42□□□□□ -0.9
VCP-204ENST00000466100 MZT1Q08AG7 82 aa9.42□□□□□ -0.9
VCP-204ENST00000466100 HNRNPA0Q13151 305 aaKnown RBP9.42□□□□□ -0.9
VCP-204ENST00000466100 KISS1Q15726 138 aa9.42□□□□□ -0.9
VCP-204ENST00000466100 MPPED2Q15777 294 aa9.42□□□□□ -0.9
VCP-204ENST00000466100 FAM166AQ6J272 317 aa9.42□□□□□ -0.9
VCP-204ENST00000466100 TPRA1Q86W33 373 aa9.42□□□□□ -0.9
VCP-204ENST00000466100 CDH26Q8IXH8 852 aa9.42□□□□□ -0.9
VCP-204ENST00000466100 NDNFQ8TB73 568 aa9.42□□□□□ -0.9
VCP-204ENST00000466100 BORCS8Q96FH0 119 aa9.42□□□□□ -0.9
VCP-204ENST00000466100 HIST1H2AAQ96QV6 131 aa9.42□□□□□ -0.9
VCP-204ENST00000466100 NKX3-1Q99801 234 aaPredicted RBP9.42□□□□□ -0.9
VCP-204ENST00000466100 SLITRK2Q9H156 845 aa9.42□□□□□ -0.9
VCP-204ENST00000466100 METTL17Q9H7H0 456 aaPredicted RBP9.42□□□□□ -0.9
VCP-204ENST00000466100 GCM1Q9NP62 436 aa9.42□□□□□ -0.9
VCP-204ENST00000466100 C14orf119Q9NWQ9 140 aa9.42□□□□□ -0.9
VCP-204ENST00000466100 AK6Q9Y3D8 172 aaKnown RBP9.42□□□□□ -0.9
VCP-204ENST00000466100 MYO9AB2RTY4 2548 aa9.41□□□□□ -0.9
VCP-204ENST00000466100 ZNF469Q96JG9 3925 aaPredicted RBP9.41□□□□□ -0.9
VCP-204ENST00000466100 IGHV3-64DA0A0J9YX35 117 aa9.41□□□□□ -0.9
VCP-204ENST00000466100 FAM230AA0A1W2PPH8 454 aa9.41□□□□□ -0.9
VCP-204ENST00000466100 SLC22A1O15245 554 aa9.41□□□□□ -0.9
VCP-204ENST00000466100 NDUFS7O75251 213 aa9.41□□□□□ -0.9
VCP-204ENST00000466100 RAB3BP20337 219 aa9.41□□□□□ -0.9
VCP-204ENST00000466100 ZNF93P35789 620 aaPredicted RBP9.41□□□□□ -0.9
VCP-204ENST00000466100 ATP1B3P54709 279 aa9.41□□□□□ -0.9
VCP-204ENST00000466100 MTCP1P56278 107 aa9.41□□□□□ -0.9
VCP-204ENST00000466100 SPCS2Q15005 226 aa9.41□□□□□ -0.9
VCP-204ENST00000466100 C1orf100Q5SVJ3 147 aa9.41□□□□□ -0.9
VCP-204ENST00000466100 ANGPTL5Q86XS5 388 aa9.41□□□□□ -0.9
VCP-204ENST00000466100 ZNF573Q86YE8 665 aa9.41□□□□□ -0.9
VCP-204ENST00000466100 TGIF2LYQ8IUE0 185 aa9.41□□□□□ -0.9
VCP-204ENST00000466100 SCCPDHQ8NBX0 429 aa9.41□□□□□ -0.9
VCP-204ENST00000466100 Q8TCH9 128 aa9.41□□□□□ -0.9
VCP-204ENST00000466100 NEU4Q8WWR8 484 aaPredicted RBP9.41□□□□□ -0.9
VCP-204ENST00000466100 AQP3Q92482 292 aa9.41□□□□□ -0.9
VCP-204ENST00000466100 RFT1Q96AA3 541 aa9.41□□□□□ -0.9
VCP-204ENST00000466100 C12orf43Q96C57 262 aaKnown RBP9.41□□□□□ -0.9
VCP-204ENST00000466100 C1orf147Q96MC9 270 aaPredicted RBP9.41□□□□□ -0.9
VCP-204ENST00000466100 VRK1Q99986 396 aaPredicted RBP9.41□□□□□ -0.9
VCP-204ENST00000466100 UQCC2Q9BRT2 126 aa9.41□□□□□ -0.9
VCP-204ENST00000466100 PKIBQ9C010 78 aa9.41□□□□□ -0.9
VCP-204ENST00000466100 RAB1BQ9H0U4 201 aa9.41□□□□□ -0.9
VCP-204ENST00000466100 SAP30LQ9HAJ7 183 aa9.41□□□□□ -0.9
VCP-204ENST00000466100 NEK6Q9HC98 313 aa9.41□□□□□ -0.9
VCP-204ENST00000466100 PLEKHA6Q9Y2H5 1048 aa9.41□□□□□ -0.9
VCP-204ENST00000466100 PRRC2AP48634 2157 aaKnown RBP9.41□□□□□ -0.9
VCP-204ENST00000466100 CREBBPQ92793 2442 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 IGKV1-12A0A0C4DH73 117 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 SMIM30A4D0T7 59 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 SLC17A2O00624 439 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 SYNGR1O43759 233 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 RP2O75695 350 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 RHBDL1O75783 438 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 LY6HO94772 140 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 CDRT1O95170 752 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 IL1AP01583 271 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 IGKV1D-12P01611 117 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 IGHV4-39P01824 125 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 GRPP07492 148 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 TNFRSF1AP19438 455 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 CFHR2P36980 270 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 RBMXP38159 391 aaKnown RBP9.4□□□□□ -0.9
VCP-204ENST00000466100 RPS19P39019 145 aaKnown RBP9.4□□□□□ -0.9
VCP-204ENST00000466100 HAAOP46952 286 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 OR3A4PP47883 348 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 SERPINB10P48595 397 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 MRPS11P82912 194 aaKnown RBP9.4□□□□□ -0.9
VCP-204ENST00000466100 MXD1Q05195 221 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 IL24Q13007 206 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 PDZK1IP1Q13113 114 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 ZNF181Q2M3W8 571 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 HAGHLQ6PII5 290 aaPredicted RBP9.4□□□□□ -0.9
VCP-204ENST00000466100 WDR82Q6UXN9 313 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 ASCL4Q6XD76 172 aa9.4□□□□□ -0.9
VCP-204ENST00000466100 ZNF826PQ6ZT77 177 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms