RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 GNALP38405 381 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 SOX2P48431 317 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 EVX1P49640 407 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 IDH3GP51553 393 aaPredicted RBP4.69□□□□□ -1.66
VPS41-211ENST00000466017 FUT6P51993 359 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 PPP3R1P63098 170 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 NKX6-1P78426 367 aaPredicted RBP4.69□□□□□ -1.66
VPS41-211ENST00000466017 ZNF45Q02386 682 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 ZNF92Q03936 586 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 TLE1Q04724 770 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 TFF3Q07654 80 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 GK2Q14410 553 aaPredicted RBP4.69□□□□□ -1.66
VPS41-211ENST00000466017 ODF1Q14990 250 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 TSC22D1Q15714 1073 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 FAM189A2Q15884 450 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 ZNF718Q3SXZ3 478 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 FAM76BQ5HYJ3 339 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 CLVS2Q5SYC1 327 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 GLYATL3Q5SZD4 288 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 FAM27D1Q5T7N8 215 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 SFXN4Q6P4A7 337 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 ASCL4Q6XD76 172 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 CCDC190Q86UF4 302 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 NR2C2APQ86WQ0 139 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 OR5AS1Q8N127 324 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 FTMTQ8N4E7 242 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 Q8NFD4 153 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 NUP37Q8NFH4 326 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 OR1M1Q8NGA1 313 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 OR5A2Q8NGI9 324 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 OR6M1Q8NGM8 313 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 MCFD2Q8NI22 146 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 ZFAND2BQ8WV99 257 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 TSEN15Q8WW01 171 aaKnown RBP4.69□□□□□ -1.66
VPS41-211ENST00000466017 CPNE2Q96FN4 548 aaPredicted RBP4.69□□□□□ -1.66
VPS41-211ENST00000466017 MARS2Q96GW9 593 aaKnown RBP4.69□□□□□ -1.66
VPS41-211ENST00000466017 GFI1Q99684 422 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 SLC30A2Q9BRI3 323 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 DCUN1D5Q9BTE7 237 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 ACTR6Q9GZN1 396 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 ABCG5Q9H222 651 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 TPK1Q9H3S4 243 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 METTL17Q9H7H0 456 aaPredicted RBP4.69□□□□□ -1.66
VPS41-211ENST00000466017 RHOFQ9HBH0 211 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 KCNJ16Q9NPI9 418 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 KCNN3Q9UGI6 736 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 NDRG3Q9UGV2 375 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 GTF2A1LQ9UNN4 478 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 NOP16Q9Y3C1 178 aaKnown RBP4.69□□□□□ -1.66
VPS41-211ENST00000466017 AK6Q9Y3D8 172 aaKnown RBP4.69□□□□□ -1.66
VPS41-211ENST00000466017 RHBDD3Q9Y3P4 386 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 ETV7Q9Y603 341 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 CACNA1BQ00975 2339 aa4.69□□□□□ -1.66
VPS41-211ENST00000466017 FRYQ5TBA9 3013 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 CELSR3Q9NYQ7 3312 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 IGLV3-9A0A075B6K5 115 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 IGHV2OR16-5A0A0B4J2B6 119 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 IGKV1-9A0A0C4DH69 117 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 A0A1W2PPK0 400 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 C5orf63A6NC05 138 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 CD300LBA8K4G0 201 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 VSTM5A8MXK1 200 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 PRSS44E7EML9 344 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 CTDSP2O14595 271 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 LDLRAD4O15165 306 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 MAGEB3O15480 346 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 GMDSO60547 372 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 AGFG2O95081 481 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 CLDN14O95500 239 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 NRASP01111 189 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 NGFP01138 241 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 CRYAAP02489 173 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 APOA1P02647 267 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 ELANEP08246 267 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 UBBP0CG47 229 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 ZNF250P15622 560 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 ANOS1P23352 680 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 ACKR3P25106 362 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 S100A5P33763 92 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 MNDAP41218 407 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 MAGEB1P43366 347 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 BMXP51813 675 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 PPP1CBP62140 327 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 MXD1Q05195 221 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 HNRNPA0Q13151 305 aaKnown RBP4.68□□□□□ -1.66
VPS41-211ENST00000466017 CNN3Q15417 329 aaKnown RBP4.68□□□□□ -1.66
VPS41-211ENST00000466017 UBE2V2Q15819 145 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 ODF4Q2M2E3 257 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 TMEM108Q6UXF1 575 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 OR2W3Q7Z3T1 314 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 LRRC28Q86X40 367 aaPredicted RBP4.68□□□□□ -1.66
VPS41-211ENST00000466017 SAXO1Q8IYX7 474 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 ZNF101Q8IZC7 436 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 ZNF843Q8N446 348 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 PAQR4Q8N4S7 273 aaPredicted RBP4.68□□□□□ -1.66
VPS41-211ENST00000466017 SPERTQ8NA61 448 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 ZSCAN4Q8NAM6 433 aaPredicted RBP4.68□□□□□ -1.66
VPS41-211ENST00000466017 ACBD4Q8NC06 268 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 PXT1Q8NFP0 134 aa4.68□□□□□ -1.66
VPS41-211ENST00000466017 OR1J1Q8NGS3 322 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms