RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-208	ENST00000465627	C1orf174	Q8IYL3	243 aa		7.53	□□□□□ -1.2
UBA3-208	ENST00000465627	CMTM4	Q8IZR5	234 aa		7.53	□□□□□ -1.2
UBA3-208	ENST00000465627	SAMD12	Q8N8I0	201 aa		7.53	□□□□□ -1.2
UBA3-208	ENST00000465627	CSNK2A3	Q8NEV1	391 aa		7.53	□□□□□ -1.2
UBA3-208	ENST00000465627	OR4M1	Q8NGD0	313 aa		7.53	□□□□□ -1.2
UBA3-208	ENST00000465627	OR51D1	Q8NGF3	324 aa		7.53	□□□□□ -1.2
UBA3-208	ENST00000465627	SLC25A40	Q8TBP6	338 aa		7.53	□□□□□ -1.2
UBA3-208	ENST00000465627	KLF14	Q8TD94	323 aa	Predicted RBP	7.53	□□□□□ -1.2
UBA3-208	ENST00000465627	PTX4	Q96A99	478 aa		7.53	□□□□□ -1.2
UBA3-208	ENST00000465627	FAM3D	Q96BQ1	224 aa		7.53	□□□□□ -1.2
UBA3-208	ENST00000465627	MUCL1	Q96DR8	90 aa		7.53	□□□□□ -1.2
UBA3-208	ENST00000465627	WFIKKN1	Q96NZ8	548 aa		7.53	□□□□□ -1.2
UBA3-208	ENST00000465627	SORCS2	Q96PQ0	1159 aa		7.53	□□□□□ -1.2
UBA3-208	ENST00000465627	WDR12	Q9GZL7	423 aa	Known RBP	7.53	□□□□□ -1.2
UBA3-208	ENST00000465627	SRR	Q9GZT4	340 aa		7.53	□□□□□ -1.2
UBA3-208	ENST00000465627	KCNK15	Q9H427	330 aa		7.53	□□□□□ -1.2
UBA3-208	ENST00000465627	PLEKHA1	Q9HB21	404 aa		7.53	□□□□□ -1.2
UBA3-208	ENST00000465627	HMG20A	Q9NP66	347 aa		7.53	□□□□□ -1.2
UBA3-208	ENST00000465627	GPR173	Q9NS66	373 aa		7.53	□□□□□ -1.2
UBA3-208	ENST00000465627	VPS13C	Q709C8	3753 aa		7.53	□□□□□ -1.2
UBA3-208	ENST00000465627	LOC100289279	A0A1B0GTE1	492 aa		7.52	□□□□□ -1.21
UBA3-208	ENST00000465627	TMEM272	A0A1B0GTI8	110 aa		7.52	□□□□□ -1.21
UBA3-208	ENST00000465627	PQLC2L	A1A4F0	135 aa		7.52	□□□□□ -1.21
UBA3-208	ENST00000465627	RGS5	O15539	181 aa		7.52	□□□□□ -1.21
UBA3-208	ENST00000465627	ZNF250	P15622	560 aa		7.52	□□□□□ -1.21
UBA3-208	ENST00000465627	AGA	P20933	346 aa		7.52	□□□□□ -1.21
UBA3-208	ENST00000465627	LOX	P28300	417 aa	Predicted RBP	7.52	□□□□□ -1.21
UBA3-208	ENST00000465627	ZNF93	P35789	620 aa	Predicted RBP	7.52	□□□□□ -1.21
UBA3-208	ENST00000465627	MNDA	P41218	407 aa		7.52	□□□□□ -1.21
UBA3-208	ENST00000465627	RAD52	P43351	418 aa		7.52	□□□□□ -1.21
UBA3-208	ENST00000465627	POU3F4	P49335	361 aa		7.52	□□□□□ -1.21
UBA3-208	ENST00000465627	MMP15	P51511	669 aa		7.52	□□□□□ -1.21
UBA3-208	ENST00000465627	ART1	P52961	327 aa		7.52	□□□□□ -1.21
UBA3-208	ENST00000465627	UNC119	Q13432	240 aa		7.52	□□□□□ -1.21
UBA3-208	ENST00000465627	DAZAP2	Q15038	168 aa	Predicted RBP	7.52	□□□□□ -1.21
UBA3-208	ENST00000465627	P2RY14	Q15391	338 aa		7.52	□□□□□ -1.21
UBA3-208	ENST00000465627	FAM76B	Q5HYJ3	339 aa		7.52	□□□□□ -1.21
UBA3-208	ENST00000465627	UBE2NL	Q5JXB2	153 aa		7.52	□□□□□ -1.21
UBA3-208	ENST00000465627	SPATA46	Q5T0L3	261 aa		7.52	□□□□□ -1.21
UBA3-208	ENST00000465627	OR2T2	Q6IF00	324 aa		7.52	□□□□□ -1.21
UBA3-208	ENST00000465627	DNM1P46	Q6ZS02	220 aa		7.52	□□□□□ -1.21
UBA3-208	ENST00000465627	MRPL21	Q7Z2W9	205 aa	Known RBP	7.52	□□□□□ -1.21
UBA3-208	ENST00000465627	C1QL2	Q7Z5L3	287 aa		7.52	□□□□□ -1.21
UBA3-208	ENST00000465627	ZNF295-AS1	Q8N0V1	137 aa		7.52	□□□□□ -1.21
UBA3-208	ENST00000465627		Q8NFD4	153 aa		7.52	□□□□□ -1.21
UBA3-208	ENST00000465627	OR1J1	Q8NGS3	322 aa		7.52	□□□□□ -1.21
UBA3-208	ENST00000465627	TMEM171	Q8WVE6	324 aa		7.52	□□□□□ -1.21
UBA3-208	ENST00000465627	ITLN2	Q8WWU7	325 aa	Predicted RBP	7.52	□□□□□ -1.21
UBA3-208	ENST00000465627	CMBL	Q96DG6	245 aa		7.52	□□□□□ -1.21
UBA3-208	ENST00000465627	TECTB	Q96PL2	329 aa		7.52	□□□□□ -1.21
UBA3-208	ENST00000465627	SPACA5	Q96QH8	159 aa		7.52	□□□□□ -1.21
UBA3-208	ENST00000465627	BCL2L14	Q9BZR8	327 aa		7.52	□□□□□ -1.21
UBA3-208	ENST00000465627	PLGRKT	Q9HBL7	147 aa		7.52	□□□□□ -1.21
UBA3-208	ENST00000465627	PALMD	Q9NP74	551 aa		7.52	□□□□□ -1.21
UBA3-208	ENST00000465627	MRPL15	Q9P015	296 aa	Known RBP	7.52	□□□□□ -1.21
UBA3-208	ENST00000465627	EIF3K	Q9UBQ5	218 aa	Known RBP	7.52	□□□□□ -1.21
UBA3-208	ENST00000465627	KCNN3	Q9UGI6	736 aa		7.52	□□□□□ -1.21
UBA3-208	ENST00000465627	GPR160	Q9UJ42	338 aa		7.52	□□□□□ -1.21
UBA3-208	ENST00000465627	IGLV3-9	A0A075B6K5	115 aa		7.51	□□□□□ -1.21
UBA3-208	ENST00000465627	IGKV1-12	A0A0C4DH73	117 aa		7.51	□□□□□ -1.21
UBA3-208	ENST00000465627	NKX2-6	A6NCS4	301 aa		7.51	□□□□□ -1.21
UBA3-208	ENST00000465627	ZNF850	A8MQ14	1090 aa		7.51	□□□□□ -1.21
UBA3-208	ENST00000465627	FOXI3	A8MTJ6	420 aa	Predicted RBP	7.51	□□□□□ -1.21
UBA3-208	ENST00000465627		M0R1B8	84 aa		7.51	□□□□□ -1.21
UBA3-208	ENST00000465627	TPPP	O94811	219 aa		7.51	□□□□□ -1.21
UBA3-208	ENST00000465627	BPNT1	O95861	308 aa		7.51	□□□□□ -1.21
UBA3-208	ENST00000465627	IGKV1D-12	P01611	117 aa		7.51	□□□□□ -1.21
UBA3-208	ENST00000465627	RAB6A	P20340	208 aa		7.51	□□□□□ -1.21
UBA3-208	ENST00000465627	PRKACB	P22694	351 aa		7.51	□□□□□ -1.21
UBA3-208	ENST00000465627	PTAFR	P25105	342 aa		7.51	□□□□□ -1.21
UBA3-208	ENST00000465627	GLRX	P35754	106 aa		7.51	□□□□□ -1.21
UBA3-208	ENST00000465627	PEX19	P40855	299 aa		7.51	□□□□□ -1.21
UBA3-208	ENST00000465627	PTGFR	P43088	359 aa		7.51	□□□□□ -1.21
UBA3-208	ENST00000465627	OR3A4P	P47883	348 aa		7.51	□□□□□ -1.21
UBA3-208	ENST00000465627	PTH2R	P49190	550 aa		7.51	□□□□□ -1.21
UBA3-208	ENST00000465627	FUT6	P51993	359 aa		7.51	□□□□□ -1.21
UBA3-208	ENST00000465627	PRDX4	Q13162	271 aa		7.51	□□□□□ -1.21
UBA3-208	ENST00000465627	CEACAM21	Q3KPI0	293 aa		7.51	□□□□□ -1.21
UBA3-208	ENST00000465627	XKRX	Q6PP77	449 aa		7.51	□□□□□ -1.21
UBA3-208	ENST00000465627	DMRTC2	Q8IXT2	367 aa	Predicted RBP	7.51	□□□□□ -1.21
UBA3-208	ENST00000465627	JAGN1	Q8N5M9	183 aa		7.51	□□□□□ -1.21
UBA3-208	ENST00000465627	NUP37	Q8NFH4	326 aa		7.51	□□□□□ -1.21
UBA3-208	ENST00000465627	RAB40A	Q8WXH6	277 aa		7.51	□□□□□ -1.21
UBA3-208	ENST00000465627	OR5P3	Q8WZ94	311 aa		7.51	□□□□□ -1.21
UBA3-208	ENST00000465627	BORCS5	Q969J3	196 aa		7.51	□□□□□ -1.21
UBA3-208	ENST00000465627	DIRAS2	Q96HU8	199 aa		7.51	□□□□□ -1.21
UBA3-208	ENST00000465627	ABHD1	Q96SE0	405 aa		7.51	□□□□□ -1.21
UBA3-208	ENST00000465627	SMR3A	Q99954	134 aa		7.51	□□□□□ -1.21
UBA3-208	ENST00000465627	OR51B6	Q9H340	312 aa		7.51	□□□□□ -1.21
UBA3-208	ENST00000465627	RHBDL2	Q9NX52	303 aa		7.51	□□□□□ -1.21
UBA3-208	ENST00000465627	COQ3	Q9NZJ6	369 aa		7.51	□□□□□ -1.21
UBA3-208	ENST00000465627	PURG	Q9UJV8	347 aa	Known RBP	7.51	□□□□□ -1.21
UBA3-208	ENST00000465627	MPC1	Q9Y5U8	109 aa		7.51	□□□□□ -1.21
UBA3-208	ENST00000465627	PLCE1	Q9P212	2302 aa		7.51	□□□□□ -1.21
UBA3-208	ENST00000465627		A0A0A6YYD4	124 aa		7.5	□□□□□ -1.21
UBA3-208	ENST00000465627		A0A0G2JMP0	313 aa		7.5	□□□□□ -1.21
UBA3-208	ENST00000465627		A0A0X1KG70	313 aa		7.5	□□□□□ -1.21
UBA3-208	ENST00000465627	FABP12	A6NFH5	140 aa		7.5	□□□□□ -1.21
UBA3-208	ENST00000465627	GGT3P	A6NGU5	568 aa		7.5	□□□□□ -1.21
UBA3-208	ENST00000465627	FAM90A27P	A6NNH2	459 aa		7.5	□□□□□ -1.21

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