RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 SEMG1P04279 462 aa11.89□□□□□ -0.51
HDAC6-214ENST00000465269 CHATP28329 748 aa11.89□□□□□ -0.51
HDAC6-214ENST00000465269 SLC25A1P53007 311 aa11.89□□□□□ -0.51
HDAC6-214ENST00000465269 FXYD6P3P58550 94 aa11.89□□□□□ -0.51
HDAC6-214ENST00000465269 ZNF273Q14593 569 aa11.89□□□□□ -0.51
HDAC6-214ENST00000465269 ZDHHC21Q8IVQ6 265 aa11.89□□□□□ -0.51
HDAC6-214ENST00000465269 AQP12AQ8IXF9 295 aa11.89□□□□□ -0.51
HDAC6-214ENST00000465269 OR52H1Q8NGJ2 320 aa11.89□□□□□ -0.51
HDAC6-214ENST00000465269 OR2AJ1Q8NGZ0 328 aa11.89□□□□□ -0.51
HDAC6-214ENST00000465269 OR5K1Q8NHB7 308 aa11.89□□□□□ -0.51
HDAC6-214ENST00000465269 CANT1Q8WVQ1 401 aa11.89□□□□□ -0.51
HDAC6-214ENST00000465269 RBMXL1Q96E39 390 aaKnown RBP11.89□□□□□ -0.51
HDAC6-214ENST00000465269 FAM46AQ96IP4 442 aaKnown RBP11.89□□□□□ -0.51
HDAC6-214ENST00000465269 C7orf34Q96L11 122 aa11.89□□□□□ -0.51
HDAC6-214ENST00000465269 PRRC1Q96M27 445 aa11.89□□□□□ -0.51
HDAC6-214ENST00000465269 DNTTIP1Q9H147 329 aa11.89□□□□□ -0.51
HDAC6-214ENST00000465269 TLNRD1Q9H1K6 362 aa11.89□□□□□ -0.51
HDAC6-214ENST00000465269 YY1AP1Q9H869 796 aa11.89□□□□□ -0.51
HDAC6-214ENST00000465269 SP140LQ9H930 580 aa11.89□□□□□ -0.51
HDAC6-214ENST00000465269 NRIP3Q9NQ35 241 aa11.89□□□□□ -0.51
HDAC6-214ENST00000465269 MRPL22Q9NWU5 206 aaKnown RBP11.89□□□□□ -0.51
HDAC6-214ENST00000465269 NDUFAF4Q9P032 175 aa11.89□□□□□ -0.51
HDAC6-214ENST00000465269 NLKQ9UBE8 527 aa11.89□□□□□ -0.51
HDAC6-214ENST00000465269 RHBDD3Q9Y3P4 386 aa11.89□□□□□ -0.51
HDAC6-214ENST00000465269 FAM32AQ9Y421 112 aaKnown RBP11.89□□□□□ -0.51
HDAC6-214ENST00000465269 ENPP4Q9Y6X5 453 aa11.89□□□□□ -0.51
HDAC6-214ENST00000465269 DHRS12A0PJE2 317 aa11.88□□□□□ -0.51
HDAC6-214ENST00000465269 RBMY1BA6NDE4 496 aaKnown RBP11.88□□□□□ -0.51
HDAC6-214ENST00000465269 RBMY1EA6NEQ0 496 aaKnown RBP11.88□□□□□ -0.51
HDAC6-214ENST00000465269 RAMP3O60896 148 aa11.88□□□□□ -0.51
HDAC6-214ENST00000465269 FABP3P05413 133 aa11.88□□□□□ -0.51
HDAC6-214ENST00000465269 RBMY1DP0C7P1 496 aaKnown RBP11.88□□□□□ -0.51
HDAC6-214ENST00000465269 PSG2P11465 335 aa11.88□□□□□ -0.51
HDAC6-214ENST00000465269 SLC34A1Q06495 639 aa11.88□□□□□ -0.51
HDAC6-214ENST00000465269 FAM98BQ52LJ0 330 aaKnown RBP11.88□□□□□ -0.51
HDAC6-214ENST00000465269 LYPD4Q6UWN0 246 aa11.88□□□□□ -0.51
HDAC6-214ENST00000465269 ZNF730Q6ZMV8 503 aa11.88□□□□□ -0.51
HDAC6-214ENST00000465269 SLC16A9Q7RTY1 509 aa11.88□□□□□ -0.51
HDAC6-214ENST00000465269 OR2W3Q7Z3T1 314 aa11.88□□□□□ -0.51
HDAC6-214ENST00000465269 ADGRG5Q8IZF4 528 aa11.88□□□□□ -0.51
HDAC6-214ENST00000465269 SPTSSAQ969W0 71 aa11.88□□□□□ -0.51
HDAC6-214ENST00000465269 NMNAT3Q96T66 252 aa11.88□□□□□ -0.51
HDAC6-214ENST00000465269 P2RX4Q99571 388 aa11.88□□□□□ -0.51
HDAC6-214ENST00000465269 FNDC11Q9BVV2 318 aa11.88□□□□□ -0.51
HDAC6-214ENST00000465269 ZNF222Q9UK12 451 aa11.88□□□□□ -0.51
HDAC6-214ENST00000465269 TCRBV3S1A0A5B6 114 aa11.87□□□□□ -0.51
HDAC6-214ENST00000465269 NUDT19A8MXV4 375 aa11.87□□□□□ -0.51
HDAC6-214ENST00000465269 ODF3BA8MYP8 253 aa11.87□□□□□ -0.51
HDAC6-214ENST00000465269 PTP4A3O75365 173 aa11.87□□□□□ -0.51
HDAC6-214ENST00000465269 NDUFB2O95178 105 aa11.87□□□□□ -0.51
HDAC6-214ENST00000465269 HLA-DQA2P01906 255 aa11.87□□□□□ -0.51
HDAC6-214ENST00000465269 PIPP12273 146 aaPredicted RBP11.87□□□□□ -0.51
HDAC6-214ENST00000465269 RHCEP18577 417 aa11.87□□□□□ -0.51
HDAC6-214ENST00000465269 CRABP1P29762 137 aa11.87□□□□□ -0.51
HDAC6-214ENST00000465269 RPL23AP62750 156 aaKnown RBP11.87□□□□□ -0.51
HDAC6-214ENST00000465269 RPL31P62899 125 aaKnown RBP11.87□□□□□ -0.51
HDAC6-214ENST00000465269 FAM3AP98173 230 aa11.87□□□□□ -0.51
HDAC6-214ENST00000465269 DYNC1I2Q13409 638 aaKnown RBP11.87□□□□□ -0.51
HDAC6-214ENST00000465269 KPNB1Q14974 876 aaKnown RBP11.87□□□□□ -0.51
HDAC6-214ENST00000465269 ANKDD1AQ495B1 522 aa11.87□□□□□ -0.51
HDAC6-214ENST00000465269 GPR139Q6DWJ6 353 aa11.87□□□□□ -0.51
HDAC6-214ENST00000465269 ADCK1Q86TW2 530 aa11.87□□□□□ -0.51
HDAC6-214ENST00000465269 CYP4Z1Q86W10 505 aa11.87□□□□□ -0.51
HDAC6-214ENST00000465269 OR51D1Q8NGF3 324 aa11.87□□□□□ -0.51
HDAC6-214ENST00000465269 MALSU1Q96EH3 234 aa11.87□□□□□ -0.51
HDAC6-214ENST00000465269 RSRC1Q96IZ7 334 aaKnown RBP11.87□□□□□ -0.51
HDAC6-214ENST00000465269 PAPOLGQ9BWT3 736 aaKnown RBP11.87□□□□□ -0.51
HDAC6-214ENST00000465269 MAGIXQ9H6Y5 334 aa11.87□□□□□ -0.51
HDAC6-214ENST00000465269 IL1RAPQ9NPH3 570 aa11.87□□□□□ -0.51
HDAC6-214ENST00000465269 RPRD1BQ9NQG5 326 aaKnown RBP11.87□□□□□ -0.51
HDAC6-214ENST00000465269 TBX1O43435 398 aa11.86□□□□□ -0.51
HDAC6-214ENST00000465269 RAP2AP10114 183 aa11.86□□□□□ -0.51
HDAC6-214ENST00000465269 IFNA8P32881 189 aa11.86□□□□□ -0.51
HDAC6-214ENST00000465269 GNALP38405 381 aa11.86□□□□□ -0.51
HDAC6-214ENST00000465269 TRAM2Q15035 370 aa11.86□□□□□ -0.51
HDAC6-214ENST00000465269 GFOD2Q3B7J2 385 aa11.86□□□□□ -0.51
HDAC6-214ENST00000465269 KLHL12Q53G59 568 aa11.86□□□□□ -0.51
HDAC6-214ENST00000465269 C9orf152Q5JTZ5 239 aa11.86□□□□□ -0.51
HDAC6-214ENST00000465269 TMPRSS11FQ6ZWK6 438 aa11.86□□□□□ -0.51
HDAC6-214ENST00000465269 MBOAT2Q6ZWT7 520 aa11.86□□□□□ -0.51
HDAC6-214ENST00000465269 OFCC1Q8IZS5 231 aa11.86□□□□□ -0.51
HDAC6-214ENST00000465269 KLHL30-AS1Q8NEE0 82 aa11.86□□□□□ -0.51
HDAC6-214ENST00000465269 OR52J3Q8NH60 311 aa11.86□□□□□ -0.51
HDAC6-214ENST00000465269 FOXRED1Q96CU9 486 aaPredicted RBP11.86□□□□□ -0.51
HDAC6-214ENST00000465269 CITED4Q96RK1 184 aa11.86□□□□□ -0.51
HDAC6-214ENST00000465269 SIGLEC7Q9Y286 467 aa11.86□□□□□ -0.51
HDAC6-214ENST00000465269 HTR3EA5X5Y0 456 aa11.85□□□□□ -0.51
HDAC6-214ENST00000465269 TVP23AA6NH52 213 aa11.85□□□□□ -0.51
HDAC6-214ENST00000465269 AMY1AP04745 511 aa11.85□□□□□ -0.51
HDAC6-214ENST00000465269 AMY2AP04746 511 aa11.85□□□□□ -0.51
HDAC6-214ENST00000465269 GLRA1P23415 457 aa11.85□□□□□ -0.51
HDAC6-214ENST00000465269 OTX1P32242 354 aaPredicted RBP11.85□□□□□ -0.51
HDAC6-214ENST00000465269 ENTPD1P49961 510 aa11.85□□□□□ -0.51
HDAC6-214ENST00000465269 DEFB136Q30KP8 78 aa11.85□□□□□ -0.51
HDAC6-214ENST00000465269 DNM1P34Q6PK57 102 aa11.85□□□□□ -0.51
HDAC6-214ENST00000465269 DRAM2Q6UX65 266 aa11.85□□□□□ -0.51
HDAC6-214ENST00000465269 KCTD8Q6ZWB6 473 aa11.85□□□□□ -0.51
HDAC6-214ENST00000465269 OR10Z1Q8NGY1 313 aa11.85□□□□□ -0.51
HDAC6-214ENST00000465269 OR4K13Q8NH42 304 aa11.85□□□□□ -0.51
HDAC6-214ENST00000465269 SGK3Q96BR1 496 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms