RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 RNF7Q9UBF6 113 aa14.86□□□□□ -0.03
COL7A1-205ENST00000465238 BLOC1S6Q9UL45 172 aa14.86□□□□□ -0.03
COL7A1-205ENST00000465238 PCDHGB5Q9Y5G0 923 aa14.86□□□□□ -0.03
COL7A1-205ENST00000465238 TMEM210A6NLX4 147 aa14.85□□□□□ -0.03
COL7A1-205ENST00000465238 ZNF732B4DXR9 585 aa14.85□□□□□ -0.03
COL7A1-205ENST00000465238 J3QLI3 93 aa14.85□□□□□ -0.03
COL7A1-205ENST00000465238 RGS10O43665 173 aa14.85□□□□□ -0.03
COL7A1-205ENST00000465238 ZFPL1O95159 310 aa14.85□□□□□ -0.03
COL7A1-205ENST00000465238 CYB5R3P00387 301 aaPredicted RBP14.85□□□□□ -0.03
COL7A1-205ENST00000465238 ZNF20P17024 532 aa14.85□□□□□ -0.03
COL7A1-205ENST00000465238 EPHA1P21709 976 aa14.85□□□□□ -0.03
COL7A1-205ENST00000465238 CRHBPP24387 322 aa14.85□□□□□ -0.03
COL7A1-205ENST00000465238 WNT4P56705 351 aa14.85□□□□□ -0.03
COL7A1-205ENST00000465238 HNRNPA0Q13151 305 aaKnown RBP14.85□□□□□ -0.03
COL7A1-205ENST00000465238 CDK5R1Q15078 307 aa14.85□□□□□ -0.03
COL7A1-205ENST00000465238 TMEM42Q69YG0 159 aa14.85□□□□□ -0.03
COL7A1-205ENST00000465238 C1orf229Q6ZS94 237 aaPredicted RBP14.85□□□□□ -0.03
COL7A1-205ENST00000465238 USP43Q70EL4 1123 aa14.85□□□□□ -0.03
COL7A1-205ENST00000465238 OR13C3Q8NGS6 347 aa14.85□□□□□ -0.03
COL7A1-205ENST00000465238 CDCA4Q9BXL8 241 aa14.85□□□□□ -0.03
COL7A1-205ENST00000465238 GPR173Q9NS66 373 aa14.85□□□□□ -0.03
COL7A1-205ENST00000465238 PAK1IP1Q9NWT1 392 aaPredicted RBP14.85□□□□□ -0.03
COL7A1-205ENST00000465238 PCDHB10Q9UN67 800 aa14.85□□□□□ -0.03
COL7A1-205ENST00000465238 LOC105371242A0A075B767 164 aa14.84□□□□□ -0.03
COL7A1-205ENST00000465238 hCG_1807616A0A1W2PRN6 198 aa14.84□□□□□ -0.03
COL7A1-205ENST00000465238 ANKRD61A6NGH8 418 aa14.84□□□□□ -0.03
COL7A1-205ENST00000465238 OR5B21A6NL26 309 aa14.84□□□□□ -0.03
COL7A1-205ENST00000465238 OGG1O15527 345 aa14.84□□□□□ -0.03
COL7A1-205ENST00000465238 GATBO75879 557 aaKnown RBP14.84□□□□□ -0.03
COL7A1-205ENST00000465238 GATA3P23771 443 aa14.84□□□□□ -0.03
COL7A1-205ENST00000465238 EEF1B2P24534 225 aaKnown RBP14.84□□□□□ -0.03
COL7A1-205ENST00000465238 RBMXP38159 391 aaKnown RBP14.84□□□□□ -0.03
COL7A1-205ENST00000465238 GPM6AP51674 278 aa14.84□□□□□ -0.03
COL7A1-205ENST00000465238 TAS2R43P59537 309 aa14.84□□□□□ -0.03
COL7A1-205ENST00000465238 GNG3P63215 75 aa14.84□□□□□ -0.03
COL7A1-205ENST00000465238 ZNF154Q13106 437 aa14.84□□□□□ -0.03
COL7A1-205ENST00000465238 XAF1Q6GPH4 301 aa14.84□□□□□ -0.03
COL7A1-205ENST00000465238 ZNF826PQ6ZT77 177 aa14.84□□□□□ -0.03
COL7A1-205ENST00000465238 WDR86Q86TI4 376 aa14.84□□□□□ -0.03
COL7A1-205ENST00000465238 BOLLQ8N9W6 283 aaKnown RBP14.84□□□□□ -0.03
COL7A1-205ENST00000465238 OR10AC1Q8NH08 325 aa14.84□□□□□ -0.03
COL7A1-205ENST00000465238 HPSE2Q8WWQ2 592 aa14.84□□□□□ -0.03
COL7A1-205ENST00000465238 FGGYQ96C11 551 aa14.84□□□□□ -0.03
COL7A1-205ENST00000465238 GAL3ST1Q99999 423 aa14.84□□□□□ -0.03
COL7A1-205ENST00000465238 PDCD1LG2Q9BQ51 273 aa14.84□□□□□ -0.03
COL7A1-205ENST00000465238 MND1Q9BWT6 205 aa14.84□□□□□ -0.03
COL7A1-205ENST00000465238 TMPRSS13Q9BYE2 586 aa14.84□□□□□ -0.03
COL7A1-205ENST00000465238 CCDC90BQ9GZT6 254 aa14.84□□□□□ -0.03
COL7A1-205ENST00000465238 SLC7A11Q9UPY5 501 aa14.84□□□□□ -0.03
COL7A1-205ENST00000465238 PPIAL4EA0A075B759 164 aa14.83□□□□□ -0.04
COL7A1-205ENST00000465238 PPIAL4DF5H284 164 aa14.83□□□□□ -0.04
COL7A1-205ENST00000465238 LALBAP00709 142 aa14.83□□□□□ -0.04
COL7A1-205ENST00000465238 AVPP01185 164 aa14.83□□□□□ -0.04
COL7A1-205ENST00000465238 PPIAL4FP0DN26 164 aa14.83□□□□□ -0.04
COL7A1-205ENST00000465238 HILS1P60008 231 aa14.83□□□□□ -0.04
COL7A1-205ENST00000465238 BTG1P62324 171 aa14.83□□□□□ -0.04
COL7A1-205ENST00000465238 DMRTC1Q5HYR2 192 aa14.83□□□□□ -0.04
COL7A1-205ENST00000465238 DCAF12L2Q5VW00 463 aa14.83□□□□□ -0.04
COL7A1-205ENST00000465238 C1QL2Q7Z5L3 287 aa14.83□□□□□ -0.04
COL7A1-205ENST00000465238 C11orf53Q8IXP5 236 aa14.83□□□□□ -0.04
COL7A1-205ENST00000465238 ZNF485Q8NCK3 441 aa14.83□□□□□ -0.04
COL7A1-205ENST00000465238 OR51A4Q8NGJ6 313 aa14.83□□□□□ -0.04
COL7A1-205ENST00000465238 TSEN15Q8WW01 171 aaKnown RBP14.83□□□□□ -0.04
COL7A1-205ENST00000465238 PP6455Q8WZ26 134 aa14.83□□□□□ -0.04
COL7A1-205ENST00000465238 SGCDQ92629 289 aa14.83□□□□□ -0.04
COL7A1-205ENST00000465238 TECTBQ96PL2 329 aa14.83□□□□□ -0.04
COL7A1-205ENST00000465238 JMJD8Q96S16 334 aa14.83□□□□□ -0.04
COL7A1-205ENST00000465238 UBAP1Q9NZ09 502 aa14.83□□□□□ -0.04
COL7A1-205ENST00000465238 PPIAL4AQ9Y536 164 aa14.83□□□□□ -0.04
COL7A1-205ENST00000465238 SIRT4Q9Y6E7 314 aaPredicted RBP14.83□□□□□ -0.04
COL7A1-205ENST00000465238 CDIPTO14735 213 aa14.82□□□□□ -0.04
COL7A1-205ENST00000465238 ZNF205O95201 554 aa14.82□□□□□ -0.04
COL7A1-205ENST00000465238 IGHV2-70P01814 119 aa14.82□□□□□ -0.04
COL7A1-205ENST00000465238 MDH2P40926 338 aaKnown RBP14.82□□□□□ -0.04
COL7A1-205ENST00000465238 ZMYND11Q15326 602 aa14.82□□□□□ -0.04
COL7A1-205ENST00000465238 FAM76BQ5HYJ3 339 aa14.82□□□□□ -0.04
COL7A1-205ENST00000465238 LRRC28Q86X40 367 aaPredicted RBP14.82□□□□□ -0.04
COL7A1-205ENST00000465238 MUC20Q8N307 709 aaPredicted RBP14.82□□□□□ -0.04
COL7A1-205ENST00000465238 SPICQ8N5J4 248 aa14.82□□□□□ -0.04
COL7A1-205ENST00000465238 ZFP41Q8N8Y5 198 aa14.82□□□□□ -0.04
COL7A1-205ENST00000465238 SCCPDHQ8NBX0 429 aa14.82□□□□□ -0.04
COL7A1-205ENST00000465238 GPR148Q8TDV2 347 aa14.82□□□□□ -0.04
COL7A1-205ENST00000465238 LRRC29Q8WV35 223 aa14.82□□□□□ -0.04
COL7A1-205ENST00000465238 RPL3LQ92901 407 aaKnown RBP14.82□□□□□ -0.04
COL7A1-205ENST00000465238 SMIM19Q96E16 107 aa14.82□□□□□ -0.04
COL7A1-205ENST00000465238 ADAT3Q96EY9 351 aaPredicted RBP14.82□□□□□ -0.04
COL7A1-205ENST00000465238 CHST5Q9GZS9 411 aa14.82□□□□□ -0.04
COL7A1-205ENST00000465238 FGF23Q9GZV9 251 aaPredicted RBP14.82□□□□□ -0.04
COL7A1-205ENST00000465238 TLNRD1Q9H1K6 362 aa14.82□□□□□ -0.04
COL7A1-205ENST00000465238 DHDHQ9UQ10 334 aa14.82□□□□□ -0.04
COL7A1-205ENST00000465238 ARHGAP32A7KAX9 2087 aa14.81□□□□□ -0.04
COL7A1-205ENST00000465238 TRIM77I1YAP6 450 aa14.81□□□□□ -0.04
COL7A1-205ENST00000465238 RGS9O75916 674 aaPredicted RBP14.81□□□□□ -0.04
COL7A1-205ENST00000465238 MT-ND2P03891 347 aa14.81□□□□□ -0.04
COL7A1-205ENST00000465238 CFPP27918 469 aa14.81□□□□□ -0.04
COL7A1-205ENST00000465238 ACTG1P63261 375 aa14.81□□□□□ -0.04
COL7A1-205ENST00000465238 IRF3Q14653 427 aa14.81□□□□□ -0.04
COL7A1-205ENST00000465238 CNN3Q15417 329 aaKnown RBP14.81□□□□□ -0.04
COL7A1-205ENST00000465238 SPHARQ15513 63 aa14.81□□□□□ -0.04
COL7A1-205ENST00000465238 TMEM155Q4W5P6 130 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms