RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 HIST1H2AAQ96QV6 131 aa11.81□□□□□ -0.52
MCF2L-220ENST00000464800 INTS14Q96SY0 518 aa11.81□□□□□ -0.52
MCF2L-220ENST00000464800 TSSK6Q9BXA6 273 aa11.81□□□□□ -0.52
MCF2L-220ENST00000464800 PRSS22Q9GZN4 317 aa11.81□□□□□ -0.52
MCF2L-220ENST00000464800 MED4Q9NPJ6 270 aa11.81□□□□□ -0.52
MCF2L-220ENST00000464800 ABCB10Q9NRK6 738 aa11.81□□□□□ -0.52
MCF2L-220ENST00000464800 USE1Q9NZ43 259 aa11.81□□□□□ -0.52
MCF2L-220ENST00000464800 H2BFMP0C1H6 154 aa11.8□□□□□ -0.52
MCF2L-220ENST00000464800 OPRL1P41146 370 aa11.8□□□□□ -0.52
MCF2L-220ENST00000464800 ERVFRD-1P60508 538 aa11.8□□□□□ -0.52
MCF2L-220ENST00000464800 THAP5Q7Z6K1 395 aa11.8□□□□□ -0.52
MCF2L-220ENST00000464800 LHFPL4Q7Z7J7 247 aa11.8□□□□□ -0.52
MCF2L-220ENST00000464800 TMEM219Q86XT9 240 aa11.8□□□□□ -0.52
MCF2L-220ENST00000464800 RPS4Y2Q8TD47 263 aa11.8□□□□□ -0.52
MCF2L-220ENST00000464800 FOXRED1Q96CU9 486 aaPredicted RBP11.8□□□□□ -0.52
MCF2L-220ENST00000464800 OR5M11Q96RB7 305 aa11.8□□□□□ -0.52
MCF2L-220ENST00000464800 WNT10AQ9GZT5 417 aa11.8□□□□□ -0.52
MCF2L-220ENST00000464800 FAM107BQ9H098 131 aa11.8□□□□□ -0.52
MCF2L-220ENST00000464800 YY1AP1Q9H869 796 aa11.8□□□□□ -0.52
MCF2L-220ENST00000464800 PITPNC1Q9UKF7 332 aa11.8□□□□□ -0.52
MCF2L-220ENST00000464800 BAIAP2Q9UQB8 552 aa11.8□□□□□ -0.52
MCF2L-220ENST00000464800 KMT2CQ8NEZ4 4911 aaKnown RBP11.8□□□□□ -0.52
MCF2L-220ENST00000464800 A0A1W2PRX2 142 aa11.79□□□□□ -0.52
MCF2L-220ENST00000464800 RIIAD1A6NNX1 92 aa11.79□□□□□ -0.52
MCF2L-220ENST00000464800 CCNB2O95067 398 aa11.79□□□□□ -0.52
MCF2L-220ENST00000464800 IFNGP01579 166 aa11.79□□□□□ -0.52
MCF2L-220ENST00000464800 ALDOBP05062 364 aa11.79□□□□□ -0.52
MCF2L-220ENST00000464800 PF4V1P10720 104 aa11.79□□□□□ -0.52
MCF2L-220ENST00000464800 ZNF3P17036 446 aa11.79□□□□□ -0.52
MCF2L-220ENST00000464800 VDAC2P45880 294 aaPredicted RBP11.79□□□□□ -0.52
MCF2L-220ENST00000464800 GNG3P63215 75 aa11.79□□□□□ -0.52
MCF2L-220ENST00000464800 SLC35A2P78381 396 aa11.79□□□□□ -0.52
MCF2L-220ENST00000464800 LINC01590Q5TEZ4 76 aa11.79□□□□□ -0.52
MCF2L-220ENST00000464800 CCBE1Q6UXH8 406 aaPredicted RBP11.79□□□□□ -0.52
MCF2L-220ENST00000464800 SHFQ7M4L6 423 aa11.79□□□□□ -0.52
MCF2L-220ENST00000464800 DYNAPQ8N1N2 210 aa11.79□□□□□ -0.52
MCF2L-220ENST00000464800 AQP11Q8NBQ7 271 aa11.79□□□□□ -0.52
MCF2L-220ENST00000464800 WFDC9Q8NEX5 89 aa11.79□□□□□ -0.52
MCF2L-220ENST00000464800 OR4Q3Q8NH05 313 aa11.79□□□□□ -0.52
MCF2L-220ENST00000464800 ZNF671Q8TAW3 534 aa11.79□□□□□ -0.52
MCF2L-220ENST00000464800 LYZL4Q96KX0 146 aa11.79□□□□□ -0.52
MCF2L-220ENST00000464800 AMELYQ99218 206 aa11.79□□□□□ -0.52
MCF2L-220ENST00000464800 OR51I2Q9H344 312 aa11.79□□□□□ -0.52
MCF2L-220ENST00000464800 A6NDX4 124 aa11.78□□□□□ -0.52
MCF2L-220ENST00000464800 FAM90A8PA6NJQ4 464 aa11.78□□□□□ -0.52
MCF2L-220ENST00000464800 ZNF732B4DXR9 585 aa11.78□□□□□ -0.52
MCF2L-220ENST00000464800 SLC1A7O00341 560 aa11.78□□□□□ -0.52
MCF2L-220ENST00000464800 SNX3O60493 162 aa11.78□□□□□ -0.52
MCF2L-220ENST00000464800 MTRF1O75570 445 aaKnown RBP11.78□□□□□ -0.52
MCF2L-220ENST00000464800 SOX14O95416 240 aa11.78□□□□□ -0.52
MCF2L-220ENST00000464800 CCL3L1P16619 93 aa11.78□□□□□ -0.52
MCF2L-220ENST00000464800 GSTT1P30711 240 aa11.78□□□□□ -0.52
MCF2L-220ENST00000464800 RAB13P51153 203 aa11.78□□□□□ -0.52
MCF2L-220ENST00000464800 PPP1R8Q12972 351 aaKnown RBP11.78□□□□□ -0.52
MCF2L-220ENST00000464800 SMIM21Q3B7S5 101 aa11.78□□□□□ -0.52
MCF2L-220ENST00000464800 DEFB121Q5J5C9 76 aa11.78□□□□□ -0.52
MCF2L-220ENST00000464800 TMEM200BQ69YZ2 307 aa11.78□□□□□ -0.52
MCF2L-220ENST00000464800 CYP2R1Q6VVX0 501 aa11.78□□□□□ -0.52
MCF2L-220ENST00000464800 ZNF782Q6ZMW2 699 aaPredicted RBP11.78□□□□□ -0.52
MCF2L-220ENST00000464800 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.78□□□□□ -0.52
MCF2L-220ENST00000464800 ZNF561Q8N587 486 aa11.78□□□□□ -0.52
MCF2L-220ENST00000464800 C11orf42Q8N5U0 333 aa11.78□□□□□ -0.52
MCF2L-220ENST00000464800 OR2T33Q8NG76 320 aa11.78□□□□□ -0.52
MCF2L-220ENST00000464800 FAM81AQ8TBF8 368 aa11.78□□□□□ -0.52
MCF2L-220ENST00000464800 ARL8BQ9NVJ2 186 aa11.78□□□□□ -0.52
MCF2L-220ENST00000464800 ARMC1Q9NVT9 282 aa11.78□□□□□ -0.52
MCF2L-220ENST00000464800 RASL12Q9NYN1 266 aa11.78□□□□□ -0.52
MCF2L-220ENST00000464800 TAGLN3Q9UI15 199 aa11.78□□□□□ -0.52
MCF2L-220ENST00000464800 TBL2Q9Y4P3 447 aaKnown RBP11.78□□□□□ -0.52
MCF2L-220ENST00000464800 TENM3Q9P273 2699 aa11.78□□□□□ -0.52
MCF2L-220ENST00000464800 RFPL4AA6NLU0 287 aa11.77□□□□□ -0.53
MCF2L-220ENST00000464800 RFPL4AL1F8VTS6 287 aa11.77□□□□□ -0.53
MCF2L-220ENST00000464800 PF4P02776 101 aa11.77□□□□□ -0.53
MCF2L-220ENST00000464800 ARG1P05089 322 aa11.77□□□□□ -0.53
MCF2L-220ENST00000464800 MAGEA2P43356 314 aa11.77□□□□□ -0.53
MCF2L-220ENST00000464800 PSMA6P60900 246 aaKnown RBP11.77□□□□□ -0.53
MCF2L-220ENST00000464800 TMEM95Q3KNT9 176 aa11.77□□□□□ -0.53
MCF2L-220ENST00000464800 CEACAM21Q3KPI0 293 aa11.77□□□□□ -0.53
MCF2L-220ENST00000464800 SPATS1Q496A3 300 aa11.77□□□□□ -0.53
MCF2L-220ENST00000464800 CEP78Q5JTW2 689 aa11.77□□□□□ -0.53
MCF2L-220ENST00000464800 C16orf89Q6UX73 402 aa11.77□□□□□ -0.53
MCF2L-220ENST00000464800 ACP7Q6ZNF0 438 aa11.77□□□□□ -0.53
MCF2L-220ENST00000464800 DEFB107AQ8IZN7 70 aa11.77□□□□□ -0.53
MCF2L-220ENST00000464800 OR4M1Q8NGD0 313 aa11.77□□□□□ -0.53
MCF2L-220ENST00000464800 OR8B12Q8NGG6 310 aa11.77□□□□□ -0.53
MCF2L-220ENST00000464800 OR2T27Q8NH04 317 aa11.77□□□□□ -0.53
MCF2L-220ENST00000464800 AQP3Q92482 292 aa11.77□□□□□ -0.53
MCF2L-220ENST00000464800 WWC2-AS2Q96NR7 200 aa11.77□□□□□ -0.53
MCF2L-220ENST00000464800 C1orf21Q9H246 121 aa11.77□□□□□ -0.53
MCF2L-220ENST00000464800 OR5B21A6NL26 309 aa11.76□□□□□ -0.53
MCF2L-220ENST00000464800 F2RL2O00254 374 aa11.76□□□□□ -0.53
MCF2L-220ENST00000464800 LYNP07948 512 aa11.76□□□□□ -0.53
MCF2L-220ENST00000464800 ATP6V1B2P21281 511 aa11.76□□□□□ -0.53
MCF2L-220ENST00000464800 CD83Q01151 205 aa11.76□□□□□ -0.53
MCF2L-220ENST00000464800 CD69Q07108 199 aa11.76□□□□□ -0.53
MCF2L-220ENST00000464800 ZNF273Q14593 569 aa11.76□□□□□ -0.53
MCF2L-220ENST00000464800 SSX2Q16385 188 aa11.76□□□□□ -0.53
MCF2L-220ENST00000464800 MICAQ29983 383 aa11.76□□□□□ -0.53
MCF2L-220ENST00000464800 HAGHLQ6PII5 290 aaPredicted RBP11.76□□□□□ -0.53
MCF2L-220ENST00000464800 CD177Q8N6Q3 437 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms