RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 PYY3Q5JQD4 70 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 SOHLH1Q5JUK2 328 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 C9orf50Q5SZB4 431 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 ZNF574Q6ZN55 896 aaPredicted RBP6.41□□□□□ -1.38
USP48-206ENST00000464577 COMMD2Q86X83 199 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 PPP1R3BQ86XI6 285 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 TMEM156Q8N614 296 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 SUMF2Q8NBJ7 301 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 ADPRHL1Q8NDY3 354 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 OR2AJ1Q8NGZ0 328 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 OR14K1Q8NGZ2 314 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 DDIT4LQ96D03 193 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 MVB12AQ96EY5 273 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 GALNT14Q96FL9 552 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 BSCL2Q96G97 398 aaPredicted RBP6.41□□□□□ -1.38
USP48-206ENST00000464577 PFDN5Q99471 154 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 ZNF2Q9BSG1 426 aaPredicted RBP6.41□□□□□ -1.38
USP48-206ENST00000464577 GPR27Q9NS67 375 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 PARPBPQ9NWS1 579 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 COPS7AQ9UBW8 275 aa6.41□□□□□ -1.38
USP48-206ENST00000464577 CACNA1CQ13936 2221 aa6.4□□□□□ -1.38
USP48-206ENST00000464577 SPTY2D1-AS1A0A0U1RR47 76 aa6.4□□□□□ -1.38
USP48-206ENST00000464577 BTBD17A6NE02 478 aa6.4□□□□□ -1.38
USP48-206ENST00000464577 TLCD2A6NGC4 264 aa6.4□□□□□ -1.38
USP48-206ENST00000464577 LILRA5A6NI73 299 aa6.4□□□□□ -1.38
USP48-206ENST00000464577 LIPT2A6NK58 231 aa6.4□□□□□ -1.38
USP48-206ENST00000464577 IFITM10A6NMD0 228 aa6.4□□□□□ -1.38
USP48-206ENST00000464577 B4DGG1 531 aa6.4□□□□□ -1.38
USP48-206ENST00000464577 SEC14L6B5MCN3 397 aa6.4□□□□□ -1.38
USP48-206ENST00000464577 RPL36A-HNRNPH2H7BZ11 118 aa6.4□□□□□ -1.38
USP48-206ENST00000464577 BCAT2O15382 392 aaPredicted RBP6.4□□□□□ -1.38
USP48-206ENST00000464577 NDUFS6O75380 124 aaKnown RBP6.4□□□□□ -1.38
USP48-206ENST00000464577 F10P00742 488 aa6.4□□□□□ -1.38
USP48-206ENST00000464577 IGLV3-1P01715 115 aa6.4□□□□□ -1.38
USP48-206ENST00000464577 PRH1P02810 166 aa6.4□□□□□ -1.38
USP48-206ENST00000464577 NME1P15531 152 aaKnown RBP6.4□□□□□ -1.38
USP48-206ENST00000464577 ZNF43P17038 809 aa6.4□□□□□ -1.38
USP48-206ENST00000464577 ITGA3P26006 1051 aa6.4□□□□□ -1.38
USP48-206ENST00000464577 ZNF133P52736 654 aaPredicted RBP6.4□□□□□ -1.38
USP48-206ENST00000464577 GRB2P62993 217 aaKnown RBP6.4□□□□□ -1.38
USP48-206ENST00000464577 DEFA6Q01524 100 aa6.4□□□□□ -1.38
USP48-206ENST00000464577 FZD2Q14332 565 aa6.4□□□□□ -1.38
USP48-206ENST00000464577 TMEM187Q14656 261 aa6.4□□□□□ -1.38
USP48-206ENST00000464577 COL19A1Q14993 1142 aa6.4□□□□□ -1.38
USP48-206ENST00000464577 TMEM240Q5SV17 173 aa6.4□□□□□ -1.38
USP48-206ENST00000464577 CRIP3Q6Q6R5 217 aa6.4□□□□□ -1.38
USP48-206ENST00000464577 PARM1Q6UWI2 310 aa6.4□□□□□ -1.38
USP48-206ENST00000464577 NOXO1Q8NFA2 376 aa6.4□□□□□ -1.38
USP48-206ENST00000464577 OR1N1Q8NGS0 311 aa6.4□□□□□ -1.38
USP48-206ENST00000464577 NTNG2Q96CW9 530 aa6.4□□□□□ -1.38
USP48-206ENST00000464577 CYYR1Q96J86 154 aa6.4□□□□□ -1.38
USP48-206ENST00000464577 FAM71F1Q96KD3 344 aaPredicted RBP6.4□□□□□ -1.38
USP48-206ENST00000464577 SOX7Q9BT81 388 aa6.4□□□□□ -1.38
USP48-206ENST00000464577 SUCNR1Q9BXA5 334 aa6.4□□□□□ -1.38
USP48-206ENST00000464577 PARP12Q9H0J9 701 aaKnown RBP6.4□□□□□ -1.38
USP48-206ENST00000464577 NAA60Q9H7X0 242 aa6.4□□□□□ -1.38
USP48-206ENST00000464577 PNRC2Q9NPJ4 139 aaKnown RBP6.4□□□□□ -1.38
USP48-206ENST00000464577 SERINC1Q9NRX5 453 aa6.4□□□□□ -1.38
USP48-206ENST00000464577 PADI1Q9ULC6 663 aa6.4□□□□□ -1.38
USP48-206ENST00000464577 POLR1DQ9Y2S0 133 aa6.4□□□□□ -1.38
USP48-206ENST00000464577 KCNIP3Q9Y2W7 256 aa6.4□□□□□ -1.38
USP48-206ENST00000464577 FBXO7Q9Y3I1 522 aa6.4□□□□□ -1.38
USP48-206ENST00000464577 ELOA3CA0A087WX78 387 aaPredicted RBP6.4□□□□□ -1.39
USP48-206ENST00000464577 CXorf65A6NEN9 183 aa6.4□□□□□ -1.39
USP48-206ENST00000464577 ETV2O00321 342 aaPredicted RBP6.4□□□□□ -1.39
USP48-206ENST00000464577 SEMA4FO95754 770 aa6.4□□□□□ -1.39
USP48-206ENST00000464577 SCGB1D2O95969 90 aa6.4□□□□□ -1.39
USP48-206ENST00000464577 IGHG1P01857 330 aa6.4□□□□□ -1.39
USP48-206ENST00000464577 OR13C7P0DN81 318 aa6.4□□□□□ -1.39
USP48-206ENST00000464577 CTSSP25774 331 aa6.4□□□□□ -1.39
USP48-206ENST00000464577 GPX4P36969 197 aaPredicted RBP6.4□□□□□ -1.39
USP48-206ENST00000464577 RPS10P46783 165 aaKnown RBP6.4□□□□□ -1.39
USP48-206ENST00000464577 OR1D4P47884 311 aa6.4□□□□□ -1.39
USP48-206ENST00000464577 FASLGP48023 281 aa6.4□□□□□ -1.39
USP48-206ENST00000464577 GABREP78334 506 aa6.4□□□□□ -1.39
USP48-206ENST00000464577 KISS1Q15726 138 aa6.4□□□□□ -1.39
USP48-206ENST00000464577 ZNF542PQ5EBM4 170 aa6.4□□□□□ -1.39
USP48-206ENST00000464577 C9orf152Q5JTZ5 239 aa6.4□□□□□ -1.39
USP48-206ENST00000464577 SLC25A47Q6Q0C1 308 aa6.4□□□□□ -1.39
USP48-206ENST00000464577 ZNF610Q8N9Z0 462 aa6.4□□□□□ -1.39
USP48-206ENST00000464577 SLC38A9Q8NBW4 561 aa6.4□□□□□ -1.39
USP48-206ENST00000464577 CCDC54Q8NEL0 328 aa6.4□□□□□ -1.39
USP48-206ENST00000464577 OR13D1Q8NGV5 346 aa6.4□□□□□ -1.39
USP48-206ENST00000464577 AKR7LQ8NHP1 331 aa6.4□□□□□ -1.39
USP48-206ENST00000464577 MAFIPQ8WZ33 124 aa6.4□□□□□ -1.39
USP48-206ENST00000464577 MR1Q95460 341 aa6.4□□□□□ -1.39
USP48-206ENST00000464577 C18orf12Q96KH6 178 aa6.4□□□□□ -1.39
USP48-206ENST00000464577 SIRT7Q9NRC8 400 aa6.4□□□□□ -1.39
USP48-206ENST00000464577 SOHLH2Q9NX45 425 aa6.4□□□□□ -1.39
USP48-206ENST00000464577 GAR1Q9NY12 217 aaKnown RBP6.4□□□□□ -1.39
USP48-206ENST00000464577 ZNF319Q9P2F9 582 aa6.4□□□□□ -1.39
USP48-206ENST00000464577 B3GAT1Q9P2W7 334 aa6.4□□□□□ -1.39
USP48-206ENST00000464577 ZDHHC8Q9ULC8 765 aa6.4□□□□□ -1.39
USP48-206ENST00000464577 MYO7AQ13402 2215 aa6.39□□□□□ -1.39
USP48-206ENST00000464577 IGKV1D-8A0A087WSZ0 117 aa6.39□□□□□ -1.39
USP48-206ENST00000464577 NSG1A0A0A6YYJ2 146 aa6.39□□□□□ -1.39
USP48-206ENST00000464577 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.39□□□□□ -1.39
USP48-206ENST00000464577 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.39□□□□□ -1.39
USP48-206ENST00000464577 DHRS7CA6NNS2 312 aa6.39□□□□□ -1.39
USP48-206ENST00000464577 H3BMH7 237 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms