RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 ASCL3Q9NQ33 180 aa3.23□□□□□ -1.89
PTCD3-205ENST00000464541 ZNF629Q9UEG4 869 aaPredicted RBP3.23□□□□□ -1.89
PTCD3-205ENST00000464541 ZNF222Q9UK12 451 aa3.23□□□□□ -1.89
PTCD3-205ENST00000464541 TET2Q6N021 2002 aaPredicted RBP3.22□□□□□ -1.89
PTCD3-205ENST00000464541 ELP1O95163 1332 aa3.22□□□□□ -1.89
PTCD3-205ENST00000464541 ABCB11O95342 1321 aa3.22□□□□□ -1.89
PTCD3-205ENST00000464541 MROH7Q68CQ1 1323 aa3.22□□□□□ -1.89
PTCD3-205ENST00000464541 IGHV3-74A0A0B4J1X5 117 aa3.22□□□□□ -1.89
PTCD3-205ENST00000464541 TMEM114B3SHH9 223 aa3.22□□□□□ -1.89
PTCD3-205ENST00000464541 E5RI56 91 aa3.22□□□□□ -1.89
PTCD3-205ENST00000464541 SMKR1H3BMG3 65 aa3.22□□□□□ -1.89
PTCD3-205ENST00000464541 K7EN84 100 aa3.22□□□□□ -1.89
PTCD3-205ENST00000464541 ZNF593O00488 134 aaPredicted RBP3.22□□□□□ -1.89
PTCD3-205ENST00000464541 KMOO15229 486 aa3.22□□□□□ -1.89
PTCD3-205ENST00000464541 SLC31A1O15431 190 aa3.22□□□□□ -1.89
PTCD3-205ENST00000464541 CRXO43186 299 aaPredicted RBP3.22□□□□□ -1.89
PTCD3-205ENST00000464541 ADAP1O75689 374 aa3.22□□□□□ -1.89
PTCD3-205ENST00000464541 RAB36O95755 333 aa3.22□□□□□ -1.89
PTCD3-205ENST00000464541 HPRT1P00492 218 aa3.22□□□□□ -1.89
PTCD3-205ENST00000464541 IGLV3-19P01714 112 aa3.22□□□□□ -1.89
PTCD3-205ENST00000464541 ORM1P02763 201 aa3.22□□□□□ -1.89
PTCD3-205ENST00000464541 HSPD1P10809 573 aaKnown RBP3.22□□□□□ -1.89
PTCD3-205ENST00000464541 FOLR1P15328 257 aa3.22□□□□□ -1.89
PTCD3-205ENST00000464541 ZNF250P15622 560 aa3.22□□□□□ -1.89
PTCD3-205ENST00000464541 ZNF7P17097 686 aaPredicted RBP3.22□□□□□ -1.89
PTCD3-205ENST00000464541 RAB4AP20338 218 aa3.22□□□□□ -1.89
PTCD3-205ENST00000464541 PVALBP20472 110 aaPredicted RBP3.22□□□□□ -1.89
PTCD3-205ENST00000464541 SERPINB5P36952 375 aa3.22□□□□□ -1.89
PTCD3-205ENST00000464541 MAGEA3P43357 314 aa3.22□□□□□ -1.89
PTCD3-205ENST00000464541 AP1S2P56377 157 aa3.22□□□□□ -1.89
PTCD3-205ENST00000464541 RHOAP61586 193 aa3.22□□□□□ -1.89
PTCD3-205ENST00000464541 PAFAH1B2P68402 229 aa3.22□□□□□ -1.89
PTCD3-205ENST00000464541 STX4Q12846 297 aa3.22□□□□□ -1.89
PTCD3-205ENST00000464541 FBXW9Q5XUX1 488 aa3.22□□□□□ -1.89
PTCD3-205ENST00000464541 FAM45BPQ6NSW5 357 aa3.22□□□□□ -1.89
PTCD3-205ENST00000464541 HMGN2P46Q86SG4 172 aa3.22□□□□□ -1.89
PTCD3-205ENST00000464541 CA13Q8N1Q1 262 aa3.22□□□□□ -1.89
PTCD3-205ENST00000464541 Q8N402 240 aa3.22□□□□□ -1.89
PTCD3-205ENST00000464541 OR2A1Q8NGT9 310 aa3.22□□□□□ -1.89
PTCD3-205ENST00000464541 FAM45AQ8TCE6 357 aa3.22□□□□□ -1.89
PTCD3-205ENST00000464541 TMEM54Q969K7 222 aa3.22□□□□□ -1.89
PTCD3-205ENST00000464541 PIK3IP1Q96FE7 263 aa3.22□□□□□ -1.89
PTCD3-205ENST00000464541 DUS3LQ96G46 650 aaKnown RBP3.22□□□□□ -1.89
PTCD3-205ENST00000464541 RILPQ96NA2 401 aa3.22□□□□□ -1.89
PTCD3-205ENST00000464541 RARRES2Q99969 163 aa3.22□□□□□ -1.89
PTCD3-205ENST00000464541 PARD6GQ9BYG4 376 aaPredicted RBP3.22□□□□□ -1.89
PTCD3-205ENST00000464541 TAS2R9Q9NYW1 312 aa3.22□□□□□ -1.89
PTCD3-205ENST00000464541 V9GYQ6 96 aa3.22□□□□□ -1.89
PTCD3-205ENST00000464541 PLA2R1Q13018 1463 aa3.22□□□□□ -1.89
PTCD3-205ENST00000464541 DOCK9Q9BZ29 2069 aa3.21□□□□□ -1.89
PTCD3-205ENST00000464541 ZNF816-ZNF321PA0A0X1KG74 233 aa3.21□□□□□ -1.9
PTCD3-205ENST00000464541 A6NDN8 102 aa3.21□□□□□ -1.9
PTCD3-205ENST00000464541 SSNA1O43805 119 aa3.21□□□□□ -1.9
PTCD3-205ENST00000464541 HPGDSO60760 199 aa3.21□□□□□ -1.9
PTCD3-205ENST00000464541 SEMA3DO95025 777 aa3.21□□□□□ -1.9
PTCD3-205ENST00000464541 VAMP5O95183 116 aa3.21□□□□□ -1.9
PTCD3-205ENST00000464541 SLC25A14O95258 325 aaPredicted RBP3.21□□□□□ -1.9
PTCD3-205ENST00000464541 ASS1P00966 412 aaKnown RBP3.21□□□□□ -1.9
PTCD3-205ENST00000464541 IFNA5P01569 189 aa3.21□□□□□ -1.9
PTCD3-205ENST00000464541 CTXN2P0C2S0 81 aa3.21□□□□□ -1.9
PTCD3-205ENST00000464541 IGHV1-8P0DP01 117 aa3.21□□□□□ -1.9
PTCD3-205ENST00000464541 HIST1H1CP16403 213 aaKnown RBP3.21□□□□□ -1.9
PTCD3-205ENST00000464541 RPA3P35244 121 aaPredicted RBP3.21□□□□□ -1.9
PTCD3-205ENST00000464541 HSPA13P48723 471 aa3.21□□□□□ -1.9
PTCD3-205ENST00000464541 RAB7AP51149 207 aa3.21□□□□□ -1.9
PTCD3-205ENST00000464541 HCCSP53701 268 aa3.21□□□□□ -1.9
PTCD3-205ENST00000464541 ARF6P62330 175 aa3.21□□□□□ -1.9
PTCD3-205ENST00000464541 PPIDQ08752 370 aaKnown RBP3.21□□□□□ -1.9
PTCD3-205ENST00000464541 BNIP2Q12982 314 aa3.21□□□□□ -1.9
PTCD3-205ENST00000464541 RAB31Q13636 194 aa3.21□□□□□ -1.9
PTCD3-205ENST00000464541 CLINT1Q14677 625 aa3.21□□□□□ -1.9
PTCD3-205ENST00000464541 PON3Q15166 354 aa3.21□□□□□ -1.9
PTCD3-205ENST00000464541 VAX1Q5SQQ9 334 aa3.21□□□□□ -1.9
PTCD3-205ENST00000464541 SPOPLQ6IQ16 392 aa3.21□□□□□ -1.9
PTCD3-205ENST00000464541 TMEM25Q86YD3 366 aa3.21□□□□□ -1.9
PTCD3-205ENST00000464541 ZNF709Q8N972 641 aa3.21□□□□□ -1.9
PTCD3-205ENST00000464541 OR8K1Q8NGG5 319 aa3.21□□□□□ -1.9
PTCD3-205ENST00000464541 OR5D18Q8NGL1 313 aa3.21□□□□□ -1.9
PTCD3-205ENST00000464541 RNASEH2CQ8TDP1 164 aaKnown RBP3.21□□□□□ -1.9
PTCD3-205ENST00000464541 PDXPQ96GD0 296 aa3.21□□□□□ -1.9
PTCD3-205ENST00000464541 CCDC42Q96M95 316 aa3.21□□□□□ -1.9
PTCD3-205ENST00000464541 AGMATQ9BSE5 352 aa3.21□□□□□ -1.9
PTCD3-205ENST00000464541 TOLLIPQ9H0E2 274 aa3.21□□□□□ -1.9
PTCD3-205ENST00000464541 ZNF442Q9H7R0 627 aa3.21□□□□□ -1.9
PTCD3-205ENST00000464541 HRASLSQ9HDD0 168 aa3.21□□□□□ -1.9
PTCD3-205ENST00000464541 IFT46Q9NQC8 304 aa3.21□□□□□ -1.9
PTCD3-205ENST00000464541 BABAM2Q9NXR7 383 aa3.21□□□□□ -1.9
PTCD3-205ENST00000464541 ZNRD1Q9P1U0 126 aa3.21□□□□□ -1.9
PTCD3-205ENST00000464541 CYB5R1Q9UHQ9 305 aa3.21□□□□□ -1.9
PTCD3-205ENST00000464541 FBXL3Q9UKT7 428 aa3.21□□□□□ -1.9
PTCD3-205ENST00000464541 SLC22A13Q9Y226 551 aa3.21□□□□□ -1.9
PTCD3-205ENST00000464541 ACOT9Q9Y305 439 aa3.21□□□□□ -1.9
PTCD3-205ENST00000464541 TBL2Q9Y4P3 447 aaKnown RBP3.21□□□□□ -1.9
PTCD3-205ENST00000464541 TMEM14AQ9Y6G1 99 aa3.21□□□□□ -1.9
PTCD3-205ENST00000464541 TRAV40A0A0B4J280 105 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 IGHV5-10-1A0A0J9YXX1 117 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 C9J4A7 227 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 FTCDNL1E5RQL4 147 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 H3BQV1 296 aa3.2□□□□□ -1.9
PTCD3-205ENST00000464541 ERI3O43414 337 aaKnown RBP3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms