RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 SIRPB1O00241 398 aa8.07□□□□□ -1.12
HPS4-208ENST00000464362 OR2C1O95371 312 aa8.07□□□□□ -1.12
HPS4-208ENST00000464362 NMBP08949 121 aa8.07□□□□□ -1.12
HPS4-208ENST00000464362 BCKDHBP21953 392 aa8.07□□□□□ -1.12
HPS4-208ENST00000464362 PTAFRP25105 342 aa8.07□□□□□ -1.12
HPS4-208ENST00000464362 GCH1P30793 250 aa8.07□□□□□ -1.12
HPS4-208ENST00000464362 ZXDAP98168 799 aa8.07□□□□□ -1.12
HPS4-208ENST00000464362 FZD5Q13467 585 aa8.07□□□□□ -1.12
HPS4-208ENST00000464362 THNSL2Q86YJ6 484 aa8.07□□□□□ -1.12
HPS4-208ENST00000464362 SLC22A18ASQ8N1D0 253 aa8.07□□□□□ -1.12
HPS4-208ENST00000464362 SLC26A10Q8NG04 563 aa8.07□□□□□ -1.12
HPS4-208ENST00000464362 OR8B12Q8NGG6 310 aa8.07□□□□□ -1.12
HPS4-208ENST00000464362 IFI44Q8TCB0 444 aa8.07□□□□□ -1.12
HPS4-208ENST00000464362 APOBEC4Q8WW27 367 aaKnown RBP8.07□□□□□ -1.12
HPS4-208ENST00000464362 UBL7Q96S82 380 aaPredicted RBP8.07□□□□□ -1.12
HPS4-208ENST00000464362 DEFB127Q9H1M4 99 aa8.07□□□□□ -1.12
HPS4-208ENST00000464362 SMOC1Q9H4F8 434 aa8.07□□□□□ -1.12
HPS4-208ENST00000464362 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.06□□□□□ -1.12
HPS4-208ENST00000464362 ZNF816-ZNF321PA0A0X1KG74 233 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 RNASEK-C17orf49H0YIS7 233 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 TNFSF14O43557 240 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 GSTZ1O43708 216 aaPredicted RBP8.06□□□□□ -1.12
HPS4-208ENST00000464362 RSPO4Q2I0M5 234 aaPredicted RBP8.06□□□□□ -1.12
HPS4-208ENST00000464362 C9orf40Q8IXQ3 194 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 ARRDC1Q8N5I2 433 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 BVESQ8NE79 360 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 MITD1Q8WV92 249 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 KISS1RQ969F8 398 aaPredicted RBP8.06□□□□□ -1.12
HPS4-208ENST00000464362 UBE2ZQ9H832 354 aaPredicted RBP8.06□□□□□ -1.12
HPS4-208ENST00000464362 MYOTQ9UBF9 498 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 CADP27708 2225 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 IGHV1OR15-9A0A0B4J2B8 117 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 A0A1W2PR80 420 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 IFNA10P01566 189 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 SFTA3P0C7M3 94 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 VSIG8P0DPA2 414 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 IL9P15248 144 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 LIMK1P53667 647 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 EDDM3BP56851 147 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 SNRPEP62304 92 aaKnown RBP8.06□□□□□ -1.12
HPS4-208ENST00000464362 BAXQ07812 192 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 PDLIM3Q53GG5 364 aaPredicted RBP8.06□□□□□ -1.12
HPS4-208ENST00000464362 C17orf78Q8N4C9 275 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 DMBX1Q8NFW5 382 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 HPSE2Q8WWQ2 592 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 DYRK2Q92630 601 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 KIRREL1Q96J84 757 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 CMTM3Q96MX0 182 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 CRISPLD2Q9H0B8 497 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 TUBG2Q9NRH3 451 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 CYB5R1Q9UHQ9 305 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 AMDHD2Q9Y303 409 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 KPTNQ9Y664 436 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 VAMP5O95183 116 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 CPN1P15169 458 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 H2BFSP57053 126 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 TFAP2EQ6VUC0 442 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 FAM24BQ8N5W8 94 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 LINC00469Q8N7U9 141 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 RPUSD4Q96CM3 377 aaKnown RBP8.06□□□□□ -1.12
HPS4-208ENST00000464362 GPR137Q96N19 417 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 PRRX2Q99811 253 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 HDHD3Q9BSH5 251 aaPredicted RBP8.06□□□□□ -1.12
HPS4-208ENST00000464362 MOB1AQ9H8S9 216 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 FBXL17Q9UF56 701 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 COL6A6A6NMZ7 2263 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 RALGAPA1Q6GYQ0 2036 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 LINC00862A6NCI5 91 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 AQP8O94778 261 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 ARG1P05089 322 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 CTRB1P17538 263 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 G0S2P27469 103 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 F2RL1P55085 397 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 ARTNQ5T4W7 220 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 CTRB2Q6GPI1 263 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 C19orf48Q6RUI8 117 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 CLEC18BQ6UXF7 455 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 DTWD2Q8NBA8 298 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 UCN2Q96RP3 112 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 IER2Q9BTL4 223 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 MFRPQ9BY79 579 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 PRELID3BQ9Y3B1 194 aa8.06□□□□□ -1.12
HPS4-208ENST00000464362 A0A087WZY1 265 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 HSPB2A8KAH6 182 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 HMSDA8MTL9 139 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 CTDSPLO15194 276 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 DUS4LO95620 317 aaKnown RBP8.05□□□□□ -1.12
HPS4-208ENST00000464362 GLAP06280 429 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 IGHV4-34P06331 123 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 ZNF32P17041 273 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 ERVK-16P61578 105 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 PMP22Q01453 160 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 TLE4Q04727 773 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 HSPB2Q16082 182 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 MICBQ29980 383 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 KIAA2026Q5HYC2 2103 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 MRPL41Q8IXM3 137 aaKnown RBP8.05□□□□□ -1.12
HPS4-208ENST00000464362 OR10J5Q8NHC4 309 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 APH1AQ96BI3 265 aa8.05□□□□□ -1.12
HPS4-208ENST00000464362 MALSU1Q96EH3 234 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms