RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 A0A1W2PP11 408 aa12.6□□□□□ -0.39
COL5A1-205ENST00000464187 A0A1W2PPZ6 126 aa12.6□□□□□ -0.39
COL5A1-205ENST00000464187 ALX3O95076 343 aa12.6□□□□□ -0.39
COL5A1-205ENST00000464187 SIX6O95475 246 aa12.6□□□□□ -0.39
COL5A1-205ENST00000464187 CSN2P05814 226 aa12.6□□□□□ -0.39
COL5A1-205ENST00000464187 PATE4P0C8F1 98 aa12.6□□□□□ -0.39
COL5A1-205ENST00000464187 FAHP16930 419 aa12.6□□□□□ -0.39
COL5A1-205ENST00000464187 CRYGSP22914 178 aa12.6□□□□□ -0.39
COL5A1-205ENST00000464187 MPGP29372 298 aa12.6□□□□□ -0.39
COL5A1-205ENST00000464187 H2BFSP57053 126 aa12.6□□□□□ -0.39
COL5A1-205ENST00000464187 ECH1Q13011 328 aa12.6□□□□□ -0.39
COL5A1-205ENST00000464187 MEF2DQ14814 521 aa12.6□□□□□ -0.39
COL5A1-205ENST00000464187 RAB35Q15286 201 aa12.6□□□□□ -0.39
COL5A1-205ENST00000464187 NKPD1Q17RQ9 610 aa12.6□□□□□ -0.39
COL5A1-205ENST00000464187 SNAI3Q3KNW1 292 aa12.6□□□□□ -0.39
COL5A1-205ENST00000464187 C4orf46Q504U0 113 aa12.6□□□□□ -0.39
COL5A1-205ENST00000464187 DMRTC1Q5HYR2 192 aa12.6□□□□□ -0.39
COL5A1-205ENST00000464187 ATPAF1Q5TC12 328 aaPredicted RBP12.6□□□□□ -0.39
COL5A1-205ENST00000464187 TEX261Q6UWH6 196 aa12.6□□□□□ -0.39
COL5A1-205ENST00000464187 OR6K3Q8NGY3 331 aa12.6□□□□□ -0.39
COL5A1-205ENST00000464187 KCNG3Q8TAE7 436 aa12.6□□□□□ -0.39
COL5A1-205ENST00000464187 CCDC107Q8WV48 283 aa12.6□□□□□ -0.39
COL5A1-205ENST00000464187 SPTSSAQ969W0 71 aa12.6□□□□□ -0.39
COL5A1-205ENST00000464187 RADILQ96JH8 1075 aa12.6□□□□□ -0.39
COL5A1-205ENST00000464187 GPER1Q99527 375 aa12.6□□□□□ -0.39
COL5A1-205ENST00000464187 BANF2Q9H503 90 aa12.6□□□□□ -0.39
COL5A1-205ENST00000464187 SLC2A8Q9NY64 477 aa12.6□□□□□ -0.39
COL5A1-205ENST00000464187 ZNF224Q9NZL3 707 aa12.6□□□□□ -0.39
COL5A1-205ENST00000464187 U3KQ87 197 aa12.6□□□□□ -0.39
COL5A1-205ENST00000464187 SPTA1P02549 2419 aa12.6□□□□□ -0.39
COL5A1-205ENST00000464187 DISC1C4P0D8 188 aa12.59□□□□□ -0.39
COL5A1-205ENST00000464187 GOSR2O14653 212 aa12.59□□□□□ -0.39
COL5A1-205ENST00000464187 PRRG2O14669 202 aa12.59□□□□□ -0.39
COL5A1-205ENST00000464187 SOCS1O15524 211 aa12.59□□□□□ -0.39
COL5A1-205ENST00000464187 TNFSF13O75888 250 aa12.59□□□□□ -0.39
COL5A1-205ENST00000464187 MPC2O95563 127 aa12.59□□□□□ -0.39
COL5A1-205ENST00000464187 IL18BPO95998 194 aa12.59□□□□□ -0.39
COL5A1-205ENST00000464187 APOC1P02654 83 aa12.59□□□□□ -0.39
COL5A1-205ENST00000464187 CHRM2P08172 466 aa12.59□□□□□ -0.39
COL5A1-205ENST00000464187 ZNF32P17041 273 aa12.59□□□□□ -0.39
COL5A1-205ENST00000464187 UBE2V2Q15819 145 aa12.59□□□□□ -0.39
COL5A1-205ENST00000464187 SCGB2B2Q4G0G5 96 aa12.59□□□□□ -0.39
COL5A1-205ENST00000464187 RNASE10Q5GAN6 216 aaKnown RBP12.59□□□□□ -0.39
COL5A1-205ENST00000464187 PLAC9Q5JTB6 97 aa12.59□□□□□ -0.39
COL5A1-205ENST00000464187 OR52W1Q6IF63 320 aa12.59□□□□□ -0.39
COL5A1-205ENST00000464187 FGFBP3Q8TAT2 258 aa12.59□□□□□ -0.39
COL5A1-205ENST00000464187 NPRL2Q8WTW4 380 aa12.59□□□□□ -0.39
COL5A1-205ENST00000464187 TMEM59Q9BXS4 323 aa12.59□□□□□ -0.39
COL5A1-205ENST00000464187 MYOZ1Q9NP98 299 aaPredicted RBP12.59□□□□□ -0.39
COL5A1-205ENST00000464187 IFT46Q9NQC8 304 aa12.59□□□□□ -0.39
COL5A1-205ENST00000464187 OPN4Q9UHM6 478 aa12.59□□□□□ -0.39
COL5A1-205ENST00000464187 KCNK7Q9Y2U2 307 aa12.59□□□□□ -0.39
COL5A1-205ENST00000464187 PLSCR5A0PG75 271 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 SGCEO43556 437 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 SYNGR3O43761 229 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 IL2RAP01589 272 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 HOXD4P09016 255 aaPredicted RBP12.58□□□□□ -0.4
COL5A1-205ENST00000464187 OR4E1P0C645 316 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 UBBP0CG47 229 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 ZNF35P13682 527 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 MPZP25189 248 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 PCBD1P61457 104 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 SCRN3Q0VDG4 424 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 LY6DQ14210 128 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 KISS1Q15726 138 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 SFRP5Q5T4F7 317 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 DCAF12L2Q5VW00 463 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 TMED4Q7Z7H5 227 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 DOLPP1Q86YN1 238 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 UXS1Q8NBZ7 420 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 ZNF680Q8NEM1 530 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 TNFAIP8L1Q8WVP5 186 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 MRGPRFQ96AM1 343 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 CYYR1Q96J86 154 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 CHST5Q9GZS9 411 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 VSIG4Q9Y279 399 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 PIGLQ9Y2B2 252 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 TIMM10BQ9Y5J6 103 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 TPRP12270 2363 aaKnown RBP12.58□□□□□ -0.4
COL5A1-205ENST00000464187 H3BUI4 141 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 CRTAPO75718 401 aaPredicted RBP12.58□□□□□ -0.4
COL5A1-205ENST00000464187 GSTP1P09211 210 aaKnown RBP12.58□□□□□ -0.4
COL5A1-205ENST00000464187 SFTPCP11686 197 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 HIST1H1DP16402 221 aaKnown RBP12.58□□□□□ -0.4
COL5A1-205ENST00000464187 TIMP3P35625 211 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 PSG4Q00888 419 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 HGFACQ04756 655 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 ZNF774Q6NX45 483 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 C17orf107Q6ZR85 190 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 Q6ZT83 130 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 C1QL2Q7Z5L3 287 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 NAXEQ8NCW5 288 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 OR5D18Q8NGL1 313 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 PP6455Q8WZ26 134 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 RAB3CQ96E17 227 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 PRRT1Q99946 306 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 DPCDQ9BVM2 203 aaPredicted RBP12.58□□□□□ -0.4
COL5A1-205ENST00000464187 TMPRSS13Q9BYE2 586 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 OR10A2Q9H208 303 aa12.58□□□□□ -0.4
COL5A1-205ENST00000464187 ANAPC10Q9UM13 185 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms