RNA–Protein interactions for RNA: ENST00000464138.1

SSR3-203, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3

Gene SSR3, Length 533 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-203ENST00000464138 KPRPQ5T749 579 aaPredicted RBP4.5□□□□□ -1.69
SSR3-203ENST00000464138 NOXRED1Q6NXP6 359 aa4.5□□□□□ -1.69
SSR3-203ENST00000464138 ZNF343Q6P1L6 599 aa4.5□□□□□ -1.69
SSR3-203ENST00000464138 LEG1Q6P5S2 330 aa4.5□□□□□ -1.69
SSR3-203ENST00000464138 C16orf87Q6PH81 154 aa4.5□□□□□ -1.69
SSR3-203ENST00000464138 GPRIN3Q6ZVF9 776 aa4.5□□□□□ -1.69
SSR3-203ENST00000464138 RPS27LQ71UM5 84 aaKnown RBP4.5□□□□□ -1.69
SSR3-203ENST00000464138 AAED1Q7RTV5 226 aa4.5□□□□□ -1.69
SSR3-203ENST00000464138 ZIC4Q8N9L1 334 aa4.5□□□□□ -1.69
SSR3-203ENST00000464138 CSNK1G2-AS1Q8NCQ2 148 aa4.5□□□□□ -1.69
SSR3-203ENST00000464138 CDC26Q8NHZ8 85 aa4.5□□□□□ -1.69
SSR3-203ENST00000464138 DCAKDQ8WVC6 231 aa4.5□□□□□ -1.69
SSR3-203ENST00000464138 C22orf15Q8WYQ4 148 aa4.5□□□□□ -1.69
SSR3-203ENST00000464138 FCGR1BQ92637 280 aa4.5□□□□□ -1.69
SSR3-203ENST00000464138 YIPF5Q969M3 257 aa4.5□□□□□ -1.69
SSR3-203ENST00000464138 AURKBQ96GD4 344 aaPredicted RBP4.5□□□□□ -1.69
SSR3-203ENST00000464138 CCDC28BQ9BUN5 200 aa4.5□□□□□ -1.69
SSR3-203ENST00000464138 MRPL37Q9BZE1 423 aaKnown RBP4.5□□□□□ -1.69
SSR3-203ENST00000464138 LINC00470Q9BZP3 86 aa4.5□□□□□ -1.69
SSR3-203ENST00000464138 TPK1Q9H3S4 243 aa4.5□□□□□ -1.69
SSR3-203ENST00000464138 CTPS2Q9NRF8 586 aa4.5□□□□□ -1.69
SSR3-203ENST00000464138 ZNF346Q9UL40 294 aaKnown RBP4.5□□□□□ -1.69
SSR3-203ENST00000464138 SNX12Q9UMY4 172 aa4.5□□□□□ -1.69
SSR3-203ENST00000464138 COL7A1Q02388 2944 aa4.5□□□□□ -1.69
SSR3-203ENST00000464138 IGHV3-16A0A0C4DH30 117 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 TEX48A0A1B0GUV7 120 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 A8MT66 165 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 H3BQF6 201 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 LGALS8O00214 317 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 TRAF3IP2O43734 574 aaPredicted RBP4.49□□□□□ -1.69
SSR3-203ENST00000464138 SUPT7LO94864 414 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 NDUFA7O95182 113 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 VAMP5O95183 116 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 ECDO95905 644 aaPredicted RBP4.49□□□□□ -1.69
SSR3-203ENST00000464138 LGI1O95970 557 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 CSTAP01040 98 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 MT-ND1P03886 318 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 GUSBP08236 651 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 HCKP08631 526 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 PPIAL4GP0DN37 164 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 ZNF35P13682 527 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 TCP1P17987 556 aaKnown RBP4.49□□□□□ -1.69
SSR3-203ENST00000464138 IMPDH1P20839 514 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 GLRXP35754 106 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 MAGEA12P43365 314 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 CAMLGP49069 296 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 GSK3BP49841 420 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 OR2B6P58173 313 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 RPS23P62266 143 aaKnown RBP4.49□□□□□ -1.69
SSR3-203ENST00000464138 HTD2P86397 168 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 BNIP1Q12981 228 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 SNTB2Q13425 540 aaKnown RBP4.49□□□□□ -1.69
SSR3-203ENST00000464138 TAF9Q16594 264 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 NDUFAF6Q330K2 333 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 SNAI3Q3KNW1 292 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 ZNF678Q5SXM1 525 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 OLFML2AQ68BL7 652 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 ASPHD2Q6ICH7 369 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 SYT10Q6XYQ8 523 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 EIF3MQ7L2H7 374 aaKnown RBP4.49□□□□□ -1.69
SSR3-203ENST00000464138 GRINAQ7Z429 371 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 MINDY2Q8NBR6 621 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 OR9K2Q8NGE7 335 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 RAB1CQ92928 201 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 CIDECQ96AQ7 238 aaPredicted RBP4.49□□□□□ -1.69
SSR3-203ENST00000464138 PINX1Q96BK5 328 aaKnown RBP4.49□□□□□ -1.69
SSR3-203ENST00000464138 PPCDCQ96CD2 204 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 DDIT4LQ96D03 193 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 TIMD4Q96H15 378 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 SDF2Q99470 211 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 ST6GALNAC5Q9BVH7 336 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 REEP4Q9H6H4 257 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 NOX3Q9HBY0 568 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 CRLF2Q9HC73 371 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 NRN1Q9NPD7 142 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 EXOSC3Q9NQT5 275 aaKnown RBP4.49□□□□□ -1.69
SSR3-203ENST00000464138 TAS2R3Q9NYW6 316 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 RNF14Q9UBS8 474 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 KLHL21Q9UJP4 597 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 SLC35A3Q9Y2D2 325 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 KLHDC2Q9Y2U9 406 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 SNX24Q9Y343 169 aa4.49□□□□□ -1.69
SSR3-203ENST00000464138 IGHV1-69-2A0A0G2JMI3 117 aa4.48□□□□□ -1.69
SSR3-203ENST00000464138 CLPSL1A2RUU4 121 aa4.48□□□□□ -1.69
SSR3-203ENST00000464138 C5orf63A6NC05 138 aa4.48□□□□□ -1.69
SSR3-203ENST00000464138 FOXI3A8MTJ6 420 aaPredicted RBP4.48□□□□□ -1.69
SSR3-203ENST00000464138 STX11O75558 287 aa4.48□□□□□ -1.69
SSR3-203ENST00000464138 FOXH1O75593 365 aa4.48□□□□□ -1.69
SSR3-203ENST00000464138 AK1P00568 194 aa4.48□□□□□ -1.69
SSR3-203ENST00000464138 TAC1P20366 129 aa4.48□□□□□ -1.69
SSR3-203ENST00000464138 PRDX2P32119 198 aa4.48□□□□□ -1.69
SSR3-203ENST00000464138 NAA20P61599 178 aa4.48□□□□□ -1.69
SSR3-203ENST00000464138 CAV1Q03135 178 aa4.48□□□□□ -1.69
SSR3-203ENST00000464138 KIAA0040Q15053 153 aa4.48□□□□□ -1.69
SSR3-203ENST00000464138 PCK2Q16822 640 aa4.48□□□□□ -1.69
SSR3-203ENST00000464138 IMPG1Q17R60 797 aa4.48□□□□□ -1.69
SSR3-203ENST00000464138 KLF17Q5JT82 389 aaPredicted RBP4.48□□□□□ -1.69
SSR3-203ENST00000464138 ZNF506Q5JVG8 444 aa4.48□□□□□ -1.69
SSR3-203ENST00000464138 VAX1Q5SQQ9 334 aa4.48□□□□□ -1.69
SSR3-203ENST00000464138 PDZK1Q5T2W1 519 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms