RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 NABP1Q96AH0 204 aa8.63□□□□□ -1.03
PTPRD-207ENST00000463477 ELMOD3Q96FG2 381 aa8.63□□□□□ -1.03
PTPRD-207ENST00000463477 ZNF416Q9BWM5 594 aa8.63□□□□□ -1.03
PTPRD-207ENST00000463477 GSX2Q9BZM3 304 aa8.63□□□□□ -1.03
PTPRD-207ENST00000463477 TINAGL1Q9GZM7 467 aaPredicted RBP8.63□□□□□ -1.03
PTPRD-207ENST00000463477 LPAR5Q9H1C0 372 aa8.63□□□□□ -1.03
PTPRD-207ENST00000463477 KIF25Q9UIL4 384 aa8.63□□□□□ -1.03
PTPRD-207ENST00000463477 DKKL1Q9UK85 242 aa8.63□□□□□ -1.03
PTPRD-207ENST00000463477 V9GYS6 101 aa8.63□□□□□ -1.03
PTPRD-207ENST00000463477 RFPL4AA6NLU0 287 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 DHRS7CA6NNS2 312 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 RFPL4AL1F8VTS6 287 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 LINC01387J3KSC0 135 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 RER1O15258 196 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 DHHO43323 396 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 B3GALNT1O75752 331 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 TOXO94900 526 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 IL2RAP01589 272 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 RPA2P15927 270 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 SSTR2P30874 369 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 S100A11P31949 105 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 CBX5P45973 191 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 RAC3P60763 192 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 MRPS34P82930 218 aaKnown RBP8.62□□□□□ -1.03
PTPRD-207ENST00000463477 ECH1Q13011 328 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 RAET1LQ5VY80 246 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 CARD17Q5XLA6 110 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 TRAPPC6BQ86SZ2 158 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 NAA40Q86UY6 237 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 C20orf196Q8IYI0 205 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 OR8H3Q8N146 312 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 ZNF283Q8N7M2 679 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 OR5M8Q8NGP6 311 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 PP6455Q8WZ26 134 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 RND1Q92730 232 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 WDYHV1Q96HA8 205 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 NKX3-1Q99801 234 aaPredicted RBP8.62□□□□□ -1.03
PTPRD-207ENST00000463477 SLC6A7Q99884 636 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 CHST6Q9GZX3 395 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 MED9Q9NWA0 146 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 ZNF319Q9P2F9 582 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 MRPS28Q9Y2Q9 187 aaKnown RBP8.62□□□□□ -1.03
PTPRD-207ENST00000463477 FAM215AQ9Y5M1 114 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 KLF2Q9Y5W3 355 aaPredicted RBP8.62□□□□□ -1.03
PTPRD-207ENST00000463477 CEACAM18A8MTB9 384 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 M0QYG6 137 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 GOSR2O14653 212 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 CDC14BO60729 498 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 CA11O75493 328 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 OPN1LWP04000 364 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 ZNF35P13682 527 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 PPP3CBP16298 524 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 ZBTB25P24278 435 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 AGTR1P30556 359 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 ZNF84P51523 738 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 AP2S1P53680 142 aaPredicted RBP8.62□□□□□ -1.03
PTPRD-207ENST00000463477 B3GALT5-AS1P59052 145 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 UBE2MP61081 183 aaKnown RBP8.62□□□□□ -1.03
PTPRD-207ENST00000463477 RAB14P61106 215 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 FGL1Q08830 312 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 ARL6IP1Q15041 203 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 C2orf68Q2NKX9 166 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 NHLRC3Q5JS37 347 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 VAX1Q5SQQ9 334 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 FAM27BQ5VT28 67 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 TMEM65Q6PI78 240 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 FAM57BQ71RH2 274 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 CHMP1BQ7LBR1 199 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 RPRMLQ8N4K4 120 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 FAM89BQ8N5H3 189 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 ZIC4Q8N9L1 334 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 OR56B1Q8NGI3 324 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 SFXN2Q96NB2 322 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 URM1Q9BTM9 101 aaKnown RBP8.62□□□□□ -1.03
PTPRD-207ENST00000463477 COQ3Q9NZJ6 369 aa8.62□□□□□ -1.03
PTPRD-207ENST00000463477 NBPF19A0A087WUL8 3843 aa8.61□□□□□ -1.03
PTPRD-207ENST00000463477 A0A0J9YW62 118 aa8.61□□□□□ -1.03
PTPRD-207ENST00000463477 A1L4Q6 167 aa8.61□□□□□ -1.03
PTPRD-207ENST00000463477 SHOXO15266 292 aa8.61□□□□□ -1.03
PTPRD-207ENST00000463477 SSX5O60225 188 aa8.61□□□□□ -1.03
PTPRD-207ENST00000463477 MTRF1O75570 445 aaKnown RBP8.61□□□□□ -1.03
PTPRD-207ENST00000463477 DHRS3O75911 302 aa8.61□□□□□ -1.03
PTPRD-207ENST00000463477 CLDN14O95500 239 aa8.61□□□□□ -1.03
PTPRD-207ENST00000463477 GLI4P10075 376 aa8.61□□□□□ -1.03
PTPRD-207ENST00000463477 RRASP10301 218 aa8.61□□□□□ -1.03
PTPRD-207ENST00000463477 NAT2P11245 290 aa8.61□□□□□ -1.03
PTPRD-207ENST00000463477 KLK2P20151 261 aa8.61□□□□□ -1.03
PTPRD-207ENST00000463477 LHX2P50458 406 aa8.61□□□□□ -1.03
PTPRD-207ENST00000463477 TAS2R31P59538 309 aa8.61□□□□□ -1.03
PTPRD-207ENST00000463477 DHRS2Q13268 280 aa8.61□□□□□ -1.03
PTPRD-207ENST00000463477 HLXQ14774 488 aaPredicted RBP8.61□□□□□ -1.03
PTPRD-207ENST00000463477 SGCAQ16586 387 aa8.61□□□□□ -1.03
PTPRD-207ENST00000463477 LY6G6FQ5SQ64 297 aa8.61□□□□□ -1.03
PTPRD-207ENST00000463477 C1orf185Q5T7R7 199 aa8.61□□□□□ -1.03
PTPRD-207ENST00000463477 NSUN5P2Q63ZY6 315 aa8.61□□□□□ -1.03
PTPRD-207ENST00000463477 GLIPR1L1Q6UWM5 242 aa8.61□□□□□ -1.03
PTPRD-207ENST00000463477 TMUB2Q71RG4 321 aa8.61□□□□□ -1.03
PTPRD-207ENST00000463477 LYG2Q86SG7 212 aa8.61□□□□□ -1.03
PTPRD-207ENST00000463477 ZNF101Q8IZC7 436 aa8.61□□□□□ -1.03
PTPRD-207ENST00000463477 ARRDC1Q8N5I2 433 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms