RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 RHBDL1O75783 438 aa13.45□□□□□ -0.26
COL1A1-202ENST00000463440 PLATP00750 562 aa13.45□□□□□ -0.26
COL1A1-202ENST00000463440 IGHV4-38-2P0DP08 117 aa13.45□□□□□ -0.26
COL1A1-202ENST00000463440 TGM4P49221 684 aa13.45□□□□□ -0.26
COL1A1-202ENST00000463440 ISL1P61371 349 aa13.45□□□□□ -0.26
COL1A1-202ENST00000463440 ELF3P78545 371 aaPredicted RBP13.45□□□□□ -0.26
COL1A1-202ENST00000463440 ZSCAN26Q16670 478 aa13.45□□□□□ -0.26
COL1A1-202ENST00000463440 LRRC10Q5BKY1 277 aa13.45□□□□□ -0.26
COL1A1-202ENST00000463440 GPR157Q5UAW9 335 aa13.45□□□□□ -0.26
COL1A1-202ENST00000463440 METTL11BQ5VVY1 283 aa13.45□□□□□ -0.26
COL1A1-202ENST00000463440 ACBD7Q8N6N7 88 aa13.45□□□□□ -0.26
COL1A1-202ENST00000463440 FAM216BQ8N7L0 139 aa13.45□□□□□ -0.26
COL1A1-202ENST00000463440 SIGLECL1Q8N7X8 197 aa13.45□□□□□ -0.26
COL1A1-202ENST00000463440 FAM216AQ8WUB2 273 aa13.45□□□□□ -0.26
COL1A1-202ENST00000463440 TMIGD2Q96BF3 282 aa13.45□□□□□ -0.26
COL1A1-202ENST00000463440 MRPL48Q96GC5 212 aaKnown RBP13.45□□□□□ -0.26
COL1A1-202ENST00000463440 Q96MT0 163 aa13.45□□□□□ -0.26
COL1A1-202ENST00000463440 MYCBPQ99417 103 aaPredicted RBP13.45□□□□□ -0.26
COL1A1-202ENST00000463440 PCGF1Q9BSM1 259 aa13.45□□□□□ -0.26
COL1A1-202ENST00000463440 GPR173Q9NS66 373 aa13.45□□□□□ -0.26
COL1A1-202ENST00000463440 ACOXLQ9NUZ1 547 aa13.45□□□□□ -0.26
COL1A1-202ENST00000463440 NLKQ9UBE8 527 aa13.45□□□□□ -0.26
COL1A1-202ENST00000463440 RPUSD1Q9UJJ7 312 aaKnown RBP13.45□□□□□ -0.26
COL1A1-202ENST00000463440 LOC100130705A0A1B0GUX0 176 aa13.44□□□□□ -0.26
COL1A1-202ENST00000463440 A0A1B0GW55 424 aa13.44□□□□□ -0.26
COL1A1-202ENST00000463440 OR2AT4A6NND4 320 aa13.44□□□□□ -0.26
COL1A1-202ENST00000463440 J3QT63 122 aa13.44□□□□□ -0.26
COL1A1-202ENST00000463440 FCN3O75636 299 aa13.44□□□□□ -0.26
COL1A1-202ENST00000463440 TOX4O94842 621 aa13.44□□□□□ -0.26
COL1A1-202ENST00000463440 UBCP0CG48 685 aaKnown RBP13.44□□□□□ -0.26
COL1A1-202ENST00000463440 DUX4L2P0CJ85 424 aa13.44□□□□□ -0.26
COL1A1-202ENST00000463440 DUX4L3P0CJ86 424 aa13.44□□□□□ -0.26
COL1A1-202ENST00000463440 DUX4L4P0CJ87 422 aa13.44□□□□□ -0.26
COL1A1-202ENST00000463440 DUX4L5P0CJ88 424 aa13.44□□□□□ -0.26
COL1A1-202ENST00000463440 DUX4L6P0CJ89 424 aa13.44□□□□□ -0.26
COL1A1-202ENST00000463440 DUX4L7P0CJ90 424 aa13.44□□□□□ -0.26
COL1A1-202ENST00000463440 HAAOP46952 286 aa13.44□□□□□ -0.26
COL1A1-202ENST00000463440 BPIFB3P59826 476 aa13.44□□□□□ -0.26
COL1A1-202ENST00000463440 ACTG1P63261 375 aa13.44□□□□□ -0.26
COL1A1-202ENST00000463440 IL13RA1P78552 427 aa13.44□□□□□ -0.26
COL1A1-202ENST00000463440 IKZF1Q13422 519 aa13.44□□□□□ -0.26
COL1A1-202ENST00000463440 TUSC1Q2TAM9 212 aa13.44□□□□□ -0.26
COL1A1-202ENST00000463440 CDONQ4KMG0 1287 aa13.44□□□□□ -0.26
COL1A1-202ENST00000463440 DUX4L9Q6RFH8 374 aaPredicted RBP13.44□□□□□ -0.26
COL1A1-202ENST00000463440 ZNF788Q6ZQV5 615 aa13.44□□□□□ -0.26
COL1A1-202ENST00000463440 C9orf139Q6ZV77 190 aa13.44□□□□□ -0.26
COL1A1-202ENST00000463440 ENTHD1Q8IYW4 607 aa13.44□□□□□ -0.26
COL1A1-202ENST00000463440 BCL6BQ8N143 479 aaPredicted RBP13.44□□□□□ -0.26
COL1A1-202ENST00000463440 RHOXF1Q8NHV9 184 aa13.44□□□□□ -0.26
COL1A1-202ENST00000463440 ANGPTL6Q8NI99 470 aa13.44□□□□□ -0.26
COL1A1-202ENST00000463440 WDFY2Q96P53 400 aa13.44□□□□□ -0.26
COL1A1-202ENST00000463440 FAM118AQ9NWS6 357 aa13.44□□□□□ -0.26
COL1A1-202ENST00000463440 RASL12Q9NYN1 266 aa13.44□□□□□ -0.26
COL1A1-202ENST00000463440 DUX4Q9UBX2 424 aa13.44□□□□□ -0.26
COL1A1-202ENST00000463440 EXOGQ9Y2C4 368 aaKnown RBP13.44□□□□□ -0.26
COL1A1-202ENST00000463440 POLDIP2Q9Y2S7 368 aa13.44□□□□□ -0.26
COL1A1-202ENST00000463440 LOC107986453A0A1B0GWG9 222 aa13.43□□□□□ -0.26
COL1A1-202ENST00000463440 PQLC2LA1A4F0 135 aa13.43□□□□□ -0.26
COL1A1-202ENST00000463440 ANKRD61A6NGH8 418 aa13.43□□□□□ -0.26
COL1A1-202ENST00000463440 A6NIN4 97 aa13.43□□□□□ -0.26
COL1A1-202ENST00000463440 J3QRE1 110 aa13.43□□□□□ -0.26
COL1A1-202ENST00000463440 SLC16A6O15403 523 aa13.43□□□□□ -0.26
COL1A1-202ENST00000463440 GABRB1P18505 474 aa13.43□□□□□ -0.26
COL1A1-202ENST00000463440 AMY2BP19961 511 aa13.43□□□□□ -0.26
COL1A1-202ENST00000463440 GABRA2P47869 451 aa13.43□□□□□ -0.26
COL1A1-202ENST00000463440 ACTA2P62736 377 aa13.43□□□□□ -0.26
COL1A1-202ENST00000463440 ACTG2P63267 376 aa13.43□□□□□ -0.26
COL1A1-202ENST00000463440 ZNF91Q05481 1191 aa13.43□□□□□ -0.26
COL1A1-202ENST00000463440 PRSS35Q8N3Z0 413 aa13.43□□□□□ -0.26
COL1A1-202ENST00000463440 ZDHHC22Q8N966 263 aa13.43□□□□□ -0.26
COL1A1-202ENST00000463440 POC1AQ8NBT0 407 aa13.43□□□□□ -0.26
COL1A1-202ENST00000463440 ZNF555Q8NEP9 628 aa13.43□□□□□ -0.26
COL1A1-202ENST00000463440 LGALS12Q96DT0 336 aa13.43□□□□□ -0.26
COL1A1-202ENST00000463440 DMRTB1Q96MA1 342 aa13.43□□□□□ -0.26
COL1A1-202ENST00000463440 RDH12Q96NR8 316 aa13.43□□□□□ -0.26
COL1A1-202ENST00000463440 GAFA1Q96PS6 74 aa13.43□□□□□ -0.26
COL1A1-202ENST00000463440 CNTD2Q9H8S5 307 aa13.43□□□□□ -0.26
COL1A1-202ENST00000463440 ESM1Q9NQ30 184 aa13.43□□□□□ -0.26
COL1A1-202ENST00000463440 SMPD3Q9NY59 655 aaPredicted RBP13.43□□□□□ -0.26
COL1A1-202ENST00000463440 AASSQ9UDR5 926 aa13.43□□□□□ -0.26
COL1A1-202ENST00000463440 SLC7A11Q9UPY5 501 aa13.43□□□□□ -0.26
COL1A1-202ENST00000463440 H3BSH0 61 aa13.42□□□□□ -0.26
COL1A1-202ENST00000463440 SIGLEC5O15389 551 aa13.42□□□□□ -0.26
COL1A1-202ENST00000463440 GATBO75879 557 aaKnown RBP13.42□□□□□ -0.26
COL1A1-202ENST00000463440 SERPINA3P01011 423 aa13.42□□□□□ -0.26
COL1A1-202ENST00000463440 SFTPBP07988 381 aa13.42□□□□□ -0.26
COL1A1-202ENST00000463440 ACAA1P09110 424 aaPredicted RBP13.42□□□□□ -0.26
COL1A1-202ENST00000463440 DBTP11182 482 aaKnown RBP13.42□□□□□ -0.26
COL1A1-202ENST00000463440 MMP9P14780 707 aa13.42□□□□□ -0.26
COL1A1-202ENST00000463440 KIR3DL2P43630 455 aa13.42□□□□□ -0.26
COL1A1-202ENST00000463440 OR12D2P58182 307 aa13.42□□□□□ -0.26
COL1A1-202ENST00000463440 ARF6P62330 175 aa13.42□□□□□ -0.26
COL1A1-202ENST00000463440 UBA52P62987 128 aaKnown RBP13.42□□□□□ -0.26
COL1A1-202ENST00000463440 BAMBIQ13145 260 aa13.42□□□□□ -0.26
COL1A1-202ENST00000463440 PDCD1Q15116 288 aa13.42□□□□□ -0.26
COL1A1-202ENST00000463440 SMIM21Q3B7S5 101 aa13.42□□□□□ -0.26
COL1A1-202ENST00000463440 TMEM244Q5VVB8 128 aa13.42□□□□□ -0.26
COL1A1-202ENST00000463440 FGFRL1Q8N441 504 aa13.42□□□□□ -0.26
COL1A1-202ENST00000463440 OR2G2Q8NGZ5 317 aa13.42□□□□□ -0.26
COL1A1-202ENST00000463440 H1FXQ92522 213 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms