RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 SLC2A2P11168 524 aaPredicted RBP12.16□□□□□ -0.46
COL6A1-202ENST00000463060 PPOXP50336 477 aa12.16□□□□□ -0.46
COL6A1-202ENST00000463060 RORCP51449 518 aa12.16□□□□□ -0.46
COL6A1-202ENST00000463060 ZNF154Q13106 437 aa12.16□□□□□ -0.46
COL6A1-202ENST00000463060 AGAP6Q5VW22 663 aa12.16□□□□□ -0.46
COL6A1-202ENST00000463060 SFXN4Q6P4A7 337 aa12.16□□□□□ -0.46
COL6A1-202ENST00000463060 C1QL2Q7Z5L3 287 aa12.16□□□□□ -0.46
COL6A1-202ENST00000463060 CALHM1Q8IU99 346 aa12.16□□□□□ -0.46
COL6A1-202ENST00000463060 CROCCP3Q8IVE0 287 aa12.16□□□□□ -0.46
COL6A1-202ENST00000463060 ZCCHC24Q8N2G6 241 aaKnown RBP12.16□□□□□ -0.46
COL6A1-202ENST00000463060 OR4D6Q8NGJ1 314 aa12.16□□□□□ -0.46
COL6A1-202ENST00000463060 OR8S1Q8NH09 359 aa12.16□□□□□ -0.46
COL6A1-202ENST00000463060 ELMOD3Q96FG2 381 aa12.16□□□□□ -0.46
COL6A1-202ENST00000463060 MEGF10Q96KG7 1140 aa12.16□□□□□ -0.46
COL6A1-202ENST00000463060 NXF2Q9GZY0 626 aaKnown RBP12.16□□□□□ -0.46
COL6A1-202ENST00000463060 CLEC4MQ9H2X3 399 aaPredicted RBP12.16□□□□□ -0.46
COL6A1-202ENST00000463060 FAIMQ9NVQ4 179 aa12.16□□□□□ -0.46
COL6A1-202ENST00000463060 C14orf119Q9NWQ9 140 aa12.16□□□□□ -0.46
COL6A1-202ENST00000463060 CCDC59Q9P031 241 aaKnown RBP12.16□□□□□ -0.46
COL6A1-202ENST00000463060 IL19Q9UHD0 177 aa12.16□□□□□ -0.46
COL6A1-202ENST00000463060 FBXO9Q9UK97 447 aaPredicted RBP12.16□□□□□ -0.46
COL6A1-202ENST00000463060 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.15□□□□□ -0.46
COL6A1-202ENST00000463060 LRP5LA4QPB2 252 aa12.15□□□□□ -0.46
COL6A1-202ENST00000463060 TMEM210A6NLX4 147 aa12.15□□□□□ -0.46
COL6A1-202ENST00000463060 OVOL3O00110 214 aa12.15□□□□□ -0.46
COL6A1-202ENST00000463060 SPRY3O43610 288 aa12.15□□□□□ -0.46
COL6A1-202ENST00000463060 ACAA1P09110 424 aaPredicted RBP12.15□□□□□ -0.46
COL6A1-202ENST00000463060 PTGFRP43088 359 aa12.15□□□□□ -0.46
COL6A1-202ENST00000463060 GATA4P43694 442 aa12.15□□□□□ -0.46
COL6A1-202ENST00000463060 PDZK1IP1Q13113 114 aa12.15□□□□□ -0.46
COL6A1-202ENST00000463060 HNRNPA0Q13151 305 aaKnown RBP12.15□□□□□ -0.46
COL6A1-202ENST00000463060 FAM209AQ5JX71 171 aa12.15□□□□□ -0.46
COL6A1-202ENST00000463060 TMEM200AQ86VY9 491 aa12.15□□□□□ -0.46
COL6A1-202ENST00000463060 ANGPTL5Q86XS5 388 aa12.15□□□□□ -0.46
COL6A1-202ENST00000463060 ZNF573Q86YE8 665 aa12.15□□□□□ -0.46
COL6A1-202ENST00000463060 JAGN1Q8N5M9 183 aa12.15□□□□□ -0.46
COL6A1-202ENST00000463060 Q8NFD4 153 aa12.15□□□□□ -0.46
COL6A1-202ENST00000463060 OR6M1Q8NGM8 313 aa12.15□□□□□ -0.46
COL6A1-202ENST00000463060 AQP3Q92482 292 aa12.15□□□□□ -0.46
COL6A1-202ENST00000463060 SORCS2Q96PQ0 1159 aa12.15□□□□□ -0.46
COL6A1-202ENST00000463060 PKIBQ9C010 78 aa12.15□□□□□ -0.46
COL6A1-202ENST00000463060 UBTD1Q9HAC8 227 aa12.15□□□□□ -0.46
COL6A1-202ENST00000463060 CELSR2Q9HCU4 2923 aa12.15□□□□□ -0.46
COL6A1-202ENST00000463060 FBN2P35556 2912 aa12.14□□□□□ -0.47
COL6A1-202ENST00000463060 IGKV1-12A0A0C4DH73 117 aa12.14□□□□□ -0.47
COL6A1-202ENST00000463060 LDLRAD4O15165 306 aa12.14□□□□□ -0.47
COL6A1-202ENST00000463060 IGKV1D-12P01611 117 aa12.14□□□□□ -0.47
COL6A1-202ENST00000463060 HTR2CP28335 458 aa12.14□□□□□ -0.47
COL6A1-202ENST00000463060 CFHR2P36980 270 aa12.14□□□□□ -0.47
COL6A1-202ENST00000463060 PMELP40967 661 aa12.14□□□□□ -0.47
COL6A1-202ENST00000463060 OR3A4PP47883 348 aa12.14□□□□□ -0.47
COL6A1-202ENST00000463060 SNRPD2P62316 118 aaKnown RBP12.14□□□□□ -0.47
COL6A1-202ENST00000463060 QRFPP83859 136 aa12.14□□□□□ -0.47
COL6A1-202ENST00000463060 TNFAIP6P98066 277 aaPredicted RBP12.14□□□□□ -0.47
COL6A1-202ENST00000463060 MZT1Q08AG7 82 aa12.14□□□□□ -0.47
COL6A1-202ENST00000463060 IL24Q13007 206 aa12.14□□□□□ -0.47
COL6A1-202ENST00000463060 MPPED2Q15777 294 aa12.14□□□□□ -0.47
COL6A1-202ENST00000463060 PCGF3Q3KNV8 242 aa12.14□□□□□ -0.47
COL6A1-202ENST00000463060 SAXO1Q8IYX7 474 aa12.14□□□□□ -0.47
COL6A1-202ENST00000463060 ZSCAN4Q8NAM6 433 aaPredicted RBP12.14□□□□□ -0.47
COL6A1-202ENST00000463060 SCCPDHQ8NBX0 429 aa12.14□□□□□ -0.47
COL6A1-202ENST00000463060 PXT1Q8NFP0 134 aa12.14□□□□□ -0.47
COL6A1-202ENST00000463060 ITLN1Q8WWA0 313 aa12.14□□□□□ -0.47
COL6A1-202ENST00000463060 RFT1Q96AA3 541 aa12.14□□□□□ -0.47
COL6A1-202ENST00000463060 KCTD12Q96CX2 325 aaKnown RBP12.14□□□□□ -0.47
COL6A1-202ENST00000463060 OR2V2Q96R30 315 aa12.14□□□□□ -0.47
COL6A1-202ENST00000463060 DCUN1D5Q9BTE7 237 aa12.14□□□□□ -0.47
COL6A1-202ENST00000463060 STEAP1Q9UHE8 339 aa12.14□□□□□ -0.47
COL6A1-202ENST00000463060 DAPK2Q9UIK4 370 aa12.14□□□□□ -0.47
COL6A1-202ENST00000463060 NAV2Q8IVL1 2488 aa12.14□□□□□ -0.47
COL6A1-202ENST00000463060 DSCAMO60469 2012 aa12.13□□□□□ -0.47
COL6A1-202ENST00000463060 CHD3Q12873 2000 aaKnown RBP12.13□□□□□ -0.47
COL6A1-202ENST00000463060 A0A075B6Q4 140 aa12.13□□□□□ -0.47
COL6A1-202ENST00000463060 H7C417 338 aa12.13□□□□□ -0.47
COL6A1-202ENST00000463060 J3QT63 122 aa12.13□□□□□ -0.47
COL6A1-202ENST00000463060 NOS1APO75052 506 aaPredicted RBP12.13□□□□□ -0.47
COL6A1-202ENST00000463060 OCMP0CE72 109 aaPredicted RBP12.13□□□□□ -0.47
COL6A1-202ENST00000463060 HAAOP46952 286 aa12.13□□□□□ -0.47
COL6A1-202ENST00000463060 SRP9P49458 86 aaKnown RBP12.13□□□□□ -0.47
COL6A1-202ENST00000463060 DYNC1I2Q13409 638 aaKnown RBP12.13□□□□□ -0.47
COL6A1-202ENST00000463060 RAB11BQ15907 218 aa12.13□□□□□ -0.47
COL6A1-202ENST00000463060 HES5Q5TA89 166 aa12.13□□□□□ -0.47
COL6A1-202ENST00000463060 PRAMEF6Q5VXH4 476 aa12.13□□□□□ -0.47
COL6A1-202ENST00000463060 C20orf204Q6ZNR8 217 aa12.13□□□□□ -0.47
COL6A1-202ENST00000463060 TBC1D15Q8TC07 691 aa12.13□□□□□ -0.47
COL6A1-202ENST00000463060 CPNE2Q96FN4 548 aaPredicted RBP12.13□□□□□ -0.47
COL6A1-202ENST00000463060 PLGRKTQ9HBL7 147 aa12.13□□□□□ -0.47
COL6A1-202ENST00000463060 GCM1Q9NP62 436 aa12.13□□□□□ -0.47
COL6A1-202ENST00000463060 DYNLRB1Q9NP97 96 aa12.13□□□□□ -0.47
COL6A1-202ENST00000463060 MTCH1Q9NZJ7 389 aa12.13□□□□□ -0.47
COL6A1-202ENST00000463060 FBLN5Q9UBX5 448 aa12.13□□□□□ -0.47
COL6A1-202ENST00000463060 OR5V1Q9UGF6 321 aa12.13□□□□□ -0.47
COL6A1-202ENST00000463060 LAMP3Q9UQV4 416 aa12.13□□□□□ -0.47
COL6A1-202ENST00000463060 A3GALT2U3KPV4 340 aa12.13□□□□□ -0.47
COL6A1-202ENST00000463060 CACNA1DQ01668 2161 aa12.13□□□□□ -0.47
COL6A1-202ENST00000463060 A0A0B4J203 849 aa12.12□□□□□ -0.47
COL6A1-202ENST00000463060 CDIPTO14735 213 aa12.12□□□□□ -0.47
COL6A1-202ENST00000463060 RHBDL1O75783 438 aa12.12□□□□□ -0.47
COL6A1-202ENST00000463060 PAHP00439 452 aa12.12□□□□□ -0.47
COL6A1-202ENST00000463060 GRPP07492 148 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms