RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	OR6N2	Q8NGY6	317 aa		9.04	□□□□□ -0.96
PTPN7-204	ENST00000462815	OR5K1	Q8NHB7	308 aa		9.04	□□□□□ -0.96
PTPN7-204	ENST00000462815	INTS14	Q96SY0	518 aa		9.04	□□□□□ -0.96
PTPN7-204	ENST00000462815	OR51I2	Q9H344	312 aa		9.04	□□□□□ -0.96
PTPN7-204	ENST00000462815	SP140L	Q9H930	580 aa		9.04	□□□□□ -0.96
PTPN7-204	ENST00000462815	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	9.04	□□□□□ -0.96
PTPN7-204	ENST00000462815	BAIAP2	Q9UQB8	552 aa		9.04	□□□□□ -0.96
PTPN7-204	ENST00000462815	KLHDC2	Q9Y2U9	406 aa		9.04	□□□□□ -0.96
PTPN7-204	ENST00000462815		A0A1W2PQ09	198 aa		9.03	□□□□□ -0.96
PTPN7-204	ENST00000462815	TCRBV3S1	A0A5B6	114 aa		9.03	□□□□□ -0.96
PTPN7-204	ENST00000462815	AQP12B	A6NM10	295 aa		9.03	□□□□□ -0.96
PTPN7-204	ENST00000462815	ANXA2P2	A6NMY6	339 aa		9.03	□□□□□ -0.96
PTPN7-204	ENST00000462815	VGLL3	A8MV65	326 aa		9.03	□□□□□ -0.96
PTPN7-204	ENST00000462815	MTRF1	O75570	445 aa	Known RBP	9.03	□□□□□ -0.96
PTPN7-204	ENST00000462815	CIB2	O75838	187 aa		9.03	□□□□□ -0.96
PTPN7-204	ENST00000462815	GLCE	O94923	617 aa		9.03	□□□□□ -0.96
PTPN7-204	ENST00000462815	CCNB2	O95067	398 aa		9.03	□□□□□ -0.96
PTPN7-204	ENST00000462815	IGLV3-1	P01715	115 aa		9.03	□□□□□ -0.96
PTPN7-204	ENST00000462815	APOC1	P02654	83 aa		9.03	□□□□□ -0.96
PTPN7-204	ENST00000462815	CD28	P10747	220 aa		9.03	□□□□□ -0.96
PTPN7-204	ENST00000462815	NDUFB7	P17568	137 aa		9.03	□□□□□ -0.96
PTPN7-204	ENST00000462815	GSTT1	P30711	240 aa		9.03	□□□□□ -0.96
PTPN7-204	ENST00000462815	BMX	P51813	675 aa		9.03	□□□□□ -0.96
PTPN7-204	ENST00000462815	ERVFRD-1	P60508	538 aa		9.03	□□□□□ -0.96
PTPN7-204	ENST00000462815	PSMA6	P60900	246 aa	Known RBP	9.03	□□□□□ -0.96
PTPN7-204	ENST00000462815	FLOT2	Q14254	428 aa		9.03	□□□□□ -0.96
PTPN7-204	ENST00000462815	HABP2	Q14520	560 aa	Predicted RBP	9.03	□□□□□ -0.96
PTPN7-204	ENST00000462815	KPNB1	Q14974	876 aa	Known RBP	9.03	□□□□□ -0.96
PTPN7-204	ENST00000462815	C1orf146	Q5VVC0	180 aa		9.03	□□□□□ -0.96
PTPN7-204	ENST00000462815	CD300LD	Q6UXZ3	194 aa		9.03	□□□□□ -0.96
PTPN7-204	ENST00000462815	AQP12A	Q8IXF9	295 aa		9.03	□□□□□ -0.96
PTPN7-204	ENST00000462815	ZDHHC23	Q8IYP9	409 aa		9.03	□□□□□ -0.96
PTPN7-204	ENST00000462815	LYG1	Q8N1E2	194 aa		9.03	□□□□□ -0.96
PTPN7-204	ENST00000462815	CD177	Q8N6Q3	437 aa		9.03	□□□□□ -0.96
PTPN7-204	ENST00000462815	OR8B12	Q8NGG6	310 aa		9.03	□□□□□ -0.96
PTPN7-204	ENST00000462815	OR51G2	Q8NGK0	314 aa		9.03	□□□□□ -0.96
PTPN7-204	ENST00000462815	OR5D13	Q8NGL4	314 aa		9.03	□□□□□ -0.96
PTPN7-204	ENST00000462815	OTOS	Q8NHW6	89 aa		9.03	□□□□□ -0.96
PTPN7-204	ENST00000462815	AQP3	Q92482	292 aa		9.03	□□□□□ -0.96
PTPN7-204	ENST00000462815	PPP1R14A	Q96A00	147 aa		9.03	□□□□□ -0.96
PTPN7-204	ENST00000462815	PGAM5	Q96HS1	289 aa		9.03	□□□□□ -0.96
PTPN7-204	ENST00000462815	NIPSNAP1	Q9BPW8	284 aa		9.03	□□□□□ -0.96
PTPN7-204	ENST00000462815	WNT10A	Q9GZT5	417 aa		9.03	□□□□□ -0.96
PTPN7-204	ENST00000462815	MMP28	Q9H239	520 aa		9.03	□□□□□ -0.96
PTPN7-204	ENST00000462815	ABCB9	Q9NP78	766 aa		9.03	□□□□□ -0.96
PTPN7-204	ENST00000462815	BRD7	Q9NPI1	651 aa		9.03	□□□□□ -0.96
PTPN7-204	ENST00000462815	SF3B6	Q9Y3B4	125 aa	Known RBP	9.03	□□□□□ -0.96
PTPN7-204	ENST00000462815	ANGPTL7	O43827	346 aa		9.02	□□□□□ -0.97
PTPN7-204	ENST00000462815	SELENOF	O60613	162 aa		9.02	□□□□□ -0.97
PTPN7-204	ENST00000462815	GMNN	O75496	209 aa		9.02	□□□□□ -0.97
PTPN7-204	ENST00000462815	GLRA1	P23415	457 aa		9.02	□□□□□ -0.97
PTPN7-204	ENST00000462815	GPM6A	P51674	278 aa		9.02	□□□□□ -0.97
PTPN7-204	ENST00000462815	DLX6	P56179	175 aa		9.02	□□□□□ -0.97
PTPN7-204	ENST00000462815	SNCB	Q16143	134 aa		9.02	□□□□□ -0.97
PTPN7-204	ENST00000462815	MICA	Q29983	383 aa		9.02	□□□□□ -0.97
PTPN7-204	ENST00000462815	TMEM200B	Q69YZ2	307 aa		9.02	□□□□□ -0.97
PTPN7-204	ENST00000462815	LIAT1	Q6ZQX7	453 aa		9.02	□□□□□ -0.97
PTPN7-204	ENST00000462815	LHFPL4	Q7Z7J7	247 aa		9.02	□□□□□ -0.97
PTPN7-204	ENST00000462815	FTMT	Q8N4E7	242 aa		9.02	□□□□□ -0.97
PTPN7-204	ENST00000462815	IQCF1	Q8N6M8	205 aa		9.02	□□□□□ -0.97
PTPN7-204	ENST00000462815	OR2T6	Q8NHC8	308 aa		9.02	□□□□□ -0.97
PTPN7-204	ENST00000462815	MRAP	Q8TCY5	172 aa		9.02	□□□□□ -0.97
PTPN7-204	ENST00000462815	PIGC	Q92535	297 aa		9.02	□□□□□ -0.97
PTPN7-204	ENST00000462815	PHF21A	Q96BD5	680 aa		9.02	□□□□□ -0.97
PTPN7-204	ENST00000462815	RNF170	Q96K19	258 aa		9.02	□□□□□ -0.97
PTPN7-204	ENST00000462815	FAM234A	Q9H0X4	552 aa		9.02	□□□□□ -0.97
PTPN7-204	ENST00000462815	RRP15	Q9Y3B9	282 aa	Known RBP	9.02	□□□□□ -0.97
PTPN7-204	ENST00000462815	LRP12	Q9Y561	859 aa		9.02	□□□□□ -0.97
PTPN7-204	ENST00000462815		A6NDX4	124 aa		9.01	□□□□□ -0.97
PTPN7-204	ENST00000462815	RIIAD1	A6NNX1	92 aa		9.01	□□□□□ -0.97
PTPN7-204	ENST00000462815	ODF3B	A8MYP8	253 aa		9.01	□□□□□ -0.97
PTPN7-204	ENST00000462815	PRR32	B1ATL7	298 aa		9.01	□□□□□ -0.97
PTPN7-204	ENST00000462815		H0YAE9	185 aa		9.01	□□□□□ -0.97
PTPN7-204	ENST00000462815	IFNG	P01579	166 aa		9.01	□□□□□ -0.97
PTPN7-204	ENST00000462815	LYN	P07948	512 aa		9.01	□□□□□ -0.97
PTPN7-204	ENST00000462815	H2BFM	P0C1H6	154 aa		9.01	□□□□□ -0.97
PTPN7-204	ENST00000462815	VSIG10L2	P0DP72	767 aa		9.01	□□□□□ -0.97
PTPN7-204	ENST00000462815	CCL3L1	P16619	93 aa		9.01	□□□□□ -0.97
PTPN7-204	ENST00000462815	ZNF3	P17036	446 aa		9.01	□□□□□ -0.97
PTPN7-204	ENST00000462815	GABRA2	P47869	451 aa		9.01	□□□□□ -0.97
PTPN7-204	ENST00000462815	LOXL3	P58215	753 aa		9.01	□□□□□ -0.97
PTPN7-204	ENST00000462815	ZNF273	Q14593	569 aa		9.01	□□□□□ -0.97
PTPN7-204	ENST00000462815	CEACAM21	Q3KPI0	293 aa		9.01	□□□□□ -0.97
PTPN7-204	ENST00000462815	DMRTC1	Q5HYR2	192 aa		9.01	□□□□□ -0.97
PTPN7-204	ENST00000462815	ACP7	Q6ZNF0	438 aa		9.01	□□□□□ -0.97
PTPN7-204	ENST00000462815		Q6ZS46	218 aa		9.01	□□□□□ -0.97
PTPN7-204	ENST00000462815	SHF	Q7M4L6	423 aa		9.01	□□□□□ -0.97
PTPN7-204	ENST00000462815	ADGRG5	Q8IZF4	528 aa		9.01	□□□□□ -0.97
PTPN7-204	ENST00000462815	FAM185A	Q8N0U4	392 aa		9.01	□□□□□ -0.97
PTPN7-204	ENST00000462815	TMEM185A	Q8NFB2	350 aa		9.01	□□□□□ -0.97
PTPN7-204	ENST00000462815	LRGUK	Q96M69	825 aa		9.01	□□□□□ -0.97
PTPN7-204	ENST00000462815	NPFFR1	Q9GZQ6	430 aa		9.01	□□□□□ -0.97
PTPN7-204	ENST00000462815	YY1AP1	Q9H869	796 aa		9.01	□□□□□ -0.97
PTPN7-204	ENST00000462815	RAB18	Q9NP72	206 aa		9.01	□□□□□ -0.97
PTPN7-204	ENST00000462815	NECAP2	Q9NVZ3	263 aa		9.01	□□□□□ -0.97
PTPN7-204	ENST00000462815	FAM206A	Q9NX38	181 aa		9.01	□□□□□ -0.97
PTPN7-204	ENST00000462815	TCF19	Q9Y242	345 aa		9.01	□□□□□ -0.97
PTPN7-204	ENST00000462815		A0A0U1RQV5	110 aa		9	□□□□□ -0.97
PTPN7-204	ENST00000462815	ZNF732	B4DXR9	585 aa		9	□□□□□ -0.97
PTPN7-204	ENST00000462815	FBXO24	O75426	580 aa		9	□□□□□ -0.97

Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms