RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 RIPPLY1Q0D2K3 151 aa12.57□□□□□ -0.4
SKA3-204ENST00000462482 LY6EQ16553 131 aa12.57□□□□□ -0.4
SKA3-204ENST00000462482 LRRC75BQ2VPJ9 315 aa12.57□□□□□ -0.4
SKA3-204ENST00000462482 SMIM21Q3B7S5 101 aa12.57□□□□□ -0.4
SKA3-204ENST00000462482 CEP78Q5JTW2 689 aa12.57□□□□□ -0.4
SKA3-204ENST00000462482 PLCXD3Q63HM9 321 aa12.57□□□□□ -0.4
SKA3-204ENST00000462482 MOB3CQ70IA8 216 aa12.57□□□□□ -0.4
SKA3-204ENST00000462482 PIGWQ7Z7B1 504 aa12.57□□□□□ -0.4
SKA3-204ENST00000462482 CPOQ8IVL8 374 aa12.57□□□□□ -0.4
SKA3-204ENST00000462482 ZNRF1Q8ND25 227 aa12.57□□□□□ -0.4
SKA3-204ENST00000462482 OR5A2Q8NGI9 324 aa12.57□□□□□ -0.4
SKA3-204ENST00000462482 NSL1Q96IY1 281 aa12.57□□□□□ -0.4
SKA3-204ENST00000462482 LYZL4Q96KX0 146 aa12.57□□□□□ -0.4
SKA3-204ENST00000462482 CHID1Q9BWS9 393 aa12.57□□□□□ -0.4
SKA3-204ENST00000462482 MROQ9BYG7 248 aa12.57□□□□□ -0.4
SKA3-204ENST00000462482 OR51I2Q9H344 312 aa12.57□□□□□ -0.4
SKA3-204ENST00000462482 LRP12Q9Y561 859 aa12.57□□□□□ -0.4
SKA3-204ENST00000462482 A0A0U1RQV5 110 aa12.56□□□□□ -0.4
SKA3-204ENST00000462482 RHBDL1O75783 438 aa12.56□□□□□ -0.4
SKA3-204ENST00000462482 OSMP13725 252 aa12.56□□□□□ -0.4
SKA3-204ENST00000462482 DCTDP32321 178 aa12.56□□□□□ -0.4
SKA3-204ENST00000462482 KIR2DS4P43632 304 aa12.56□□□□□ -0.4
SKA3-204ENST00000462482 AANATQ16613 207 aa12.56□□□□□ -0.4
SKA3-204ENST00000462482 ZNF829Q3KNS6 432 aaPredicted RBP12.56□□□□□ -0.4
SKA3-204ENST00000462482 HAGHLQ6PII5 290 aaPredicted RBP12.56□□□□□ -0.4
SKA3-204ENST00000462482 DEGS2Q6QHC5 323 aa12.56□□□□□ -0.4
SKA3-204ENST00000462482 CCDC124Q96CT7 223 aaKnown RBP12.56□□□□□ -0.4
SKA3-204ENST00000462482 SDSLQ96GA7 329 aa12.56□□□□□ -0.4
SKA3-204ENST00000462482 YIPF3Q9GZM5 350 aa12.56□□□□□ -0.4
SKA3-204ENST00000462482 NPFFR1Q9GZQ6 430 aa12.56□□□□□ -0.4
SKA3-204ENST00000462482 C1orf21Q9H246 121 aa12.56□□□□□ -0.4
SKA3-204ENST00000462482 RANBP3Q9H6Z4 567 aaPredicted RBP12.56□□□□□ -0.4
SKA3-204ENST00000462482 YY1AP1Q9H869 796 aa12.56□□□□□ -0.4
SKA3-204ENST00000462482 ELL3Q9HB65 397 aaPredicted RBP12.56□□□□□ -0.4
SKA3-204ENST00000462482 ENPP5Q9UJA9 477 aa12.56□□□□□ -0.4
SKA3-204ENST00000462482 TMEM14AQ9Y6G1 99 aa12.56□□□□□ -0.4
SKA3-204ENST00000462482 IGKV1D-17A0A075B6S4 117 aa12.55□□□□□ -0.4
SKA3-204ENST00000462482 MTRF1O75570 445 aaKnown RBP12.55□□□□□ -0.4
SKA3-204ENST00000462482 ALOX5APP20292 161 aa12.55□□□□□ -0.4
SKA3-204ENST00000462482 RPL31P62899 125 aaKnown RBP12.55□□□□□ -0.4
SKA3-204ENST00000462482 MS4A2Q01362 244 aa12.55□□□□□ -0.4
SKA3-204ENST00000462482 ZNF684Q5T5D7 378 aa12.55□□□□□ -0.4
SKA3-204ENST00000462482 ZBTB37Q5TC79 503 aa12.55□□□□□ -0.4
SKA3-204ENST00000462482 LCN1P1Q5VSP4 162 aa12.55□□□□□ -0.4
SKA3-204ENST00000462482 LIAT1Q6ZQX7 453 aa12.55□□□□□ -0.4
SKA3-204ENST00000462482 ASB17Q8WXJ9 295 aa12.55□□□□□ -0.4
SKA3-204ENST00000462482 AQP3Q92482 292 aa12.55□□□□□ -0.4
SKA3-204ENST00000462482 ASB9Q96DX5 294 aa12.55□□□□□ -0.4
SKA3-204ENST00000462482 FGF23Q9GZV9 251 aaPredicted RBP12.55□□□□□ -0.4
SKA3-204ENST00000462482 MEGF9Q9H1U4 602 aa12.55□□□□□ -0.4
SKA3-204ENST00000462482 TAS2R1Q9NYW7 299 aa12.55□□□□□ -0.4
SKA3-204ENST00000462482 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.55□□□□□ -0.4
SKA3-204ENST00000462482 DOCK11Q5JSL3 2073 aa12.55□□□□□ -0.4
SKA3-204ENST00000462482 VWFP04275 2813 aa12.55□□□□□ -0.4
SKA3-204ENST00000462482 RFPL4AA6NLU0 287 aa12.54□□□□□ -0.4
SKA3-204ENST00000462482 RFPL4AL1F8VTS6 287 aa12.54□□□□□ -0.4
SKA3-204ENST00000462482 ZNF254O75437 659 aa12.54□□□□□ -0.4
SKA3-204ENST00000462482 ANXA8P13928 327 aa12.54□□□□□ -0.4
SKA3-204ENST00000462482 CALB2P22676 271 aa12.54□□□□□ -0.4
SKA3-204ENST00000462482 RIDAP52758 137 aaKnown RBP12.54□□□□□ -0.4
SKA3-204ENST00000462482 ACTR3P61158 418 aa12.54□□□□□ -0.4
SKA3-204ENST00000462482 APOFQ13790 326 aa12.54□□□□□ -0.4
SKA3-204ENST00000462482 ZNF573Q86YE8 665 aa12.54□□□□□ -0.4
SKA3-204ENST00000462482 ZNF561Q8N587 486 aa12.54□□□□□ -0.4
SKA3-204ENST00000462482 KLHDC1Q8N7A1 406 aa12.54□□□□□ -0.4
SKA3-204ENST00000462482 OR5K1Q8NHB7 308 aa12.54□□□□□ -0.4
SKA3-204ENST00000462482 OR51E1Q8TCB6 317 aa12.54□□□□□ -0.4
SKA3-204ENST00000462482 RORBQ92753 470 aa12.54□□□□□ -0.4
SKA3-204ENST00000462482 PBOV1Q9GZY1 135 aa12.54□□□□□ -0.4
SKA3-204ENST00000462482 GPR84Q9NQS5 396 aa12.54□□□□□ -0.4
SKA3-204ENST00000462482 C19orf12Q9NSK7 152 aa12.54□□□□□ -0.4
SKA3-204ENST00000462482 FAM206AQ9NX38 181 aa12.54□□□□□ -0.4
SKA3-204ENST00000462482 USE1Q9NZ43 259 aa12.54□□□□□ -0.4
SKA3-204ENST00000462482 ZNF222Q9UK12 451 aa12.54□□□□□ -0.4
SKA3-204ENST00000462482 IKZF2Q9UKS7 526 aa12.54□□□□□ -0.4
SKA3-204ENST00000462482 GTF2A1LQ9UNN4 478 aa12.54□□□□□ -0.4
SKA3-204ENST00000462482 PIGLQ9Y2B2 252 aa12.54□□□□□ -0.4
SKA3-204ENST00000462482 POLDIP2Q9Y2S7 368 aa12.54□□□□□ -0.4
SKA3-204ENST00000462482 KLHDC2Q9Y2U9 406 aa12.54□□□□□ -0.4
SKA3-204ENST00000462482 SIGLEC9Q9Y336 463 aa12.54□□□□□ -0.4
SKA3-204ENST00000462482 TGP01266 2768 aa12.54□□□□□ -0.4
SKA3-204ENST00000462482 NXPH2O95156 264 aa12.53□□□□□ -0.4
SKA3-204ENST00000462482 NRASP01111 189 aa12.53□□□□□ -0.4
SKA3-204ENST00000462482 OPN1MWP04001 364 aa12.53□□□□□ -0.4
SKA3-204ENST00000462482 OPN1MW2P0DN77 364 aa12.53□□□□□ -0.4
SKA3-204ENST00000462482 OPN1MW3P0DN78 364 aa12.53□□□□□ -0.4
SKA3-204ENST00000462482 VSIG10L2P0DP72 767 aa12.53□□□□□ -0.4
SKA3-204ENST00000462482 PRDX2P32119 198 aa12.53□□□□□ -0.4
SKA3-204ENST00000462482 EFNB2P52799 333 aa12.53□□□□□ -0.4
SKA3-204ENST00000462482 ERVFRD-1P60508 538 aa12.53□□□□□ -0.4
SKA3-204ENST00000462482 ESRRGP62508 458 aa12.53□□□□□ -0.4
SKA3-204ENST00000462482 CDK5Q00535 292 aa12.53□□□□□ -0.4
SKA3-204ENST00000462482 SNAPC1Q16533 368 aa12.53□□□□□ -0.4
SKA3-204ENST00000462482 ACP7Q6ZNF0 438 aa12.53□□□□□ -0.4
SKA3-204ENST00000462482 MKXQ8IYA7 352 aa12.53□□□□□ -0.4
SKA3-204ENST00000462482 ZNF679Q8IYX0 411 aa12.53□□□□□ -0.4
SKA3-204ENST00000462482 C11orf44Q8N8P7 122 aa12.53□□□□□ -0.4
SKA3-204ENST00000462482 POC1AQ8NBT0 407 aa12.53□□□□□ -0.4
SKA3-204ENST00000462482 BBS1Q8NFJ9 593 aa12.53□□□□□ -0.4
SKA3-204ENST00000462482 OR2T27Q8NH04 317 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms