RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 SNX5Q9Y5X3 404 aa4.82□□□□□ -1.64
VPS36-202ENST00000462289 ATRQ13535 2644 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 IGHV1-69-2A0A0G2JMI3 117 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 PLSCR5A0PG75 271 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 EFCAB10A6NFE3 127 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 E9PI62 339 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 F5H0A9 414 aaPredicted RBP4.81□□□□□ -1.64
VPS36-202ENST00000462289 LOC110117498-PIK3R3F6TDL0 507 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 H0YL77 283 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.81□□□□□ -1.64
VPS36-202ENST00000462289 PSMD9O00233 223 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 SLC1A7O00341 560 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 XPNPEP2O43895 674 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 TIMM8AO60220 97 aaPredicted RBP4.81□□□□□ -1.64
VPS36-202ENST00000462289 GPX5O75715 221 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 SC5DO75845 299 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 ZFPL1O95159 310 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 LALBAP00709 142 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 IGHV2-70P01814 119 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 MT-ND2P03891 347 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 MT-ND5P03915 603 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 KRT8P05787 483 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 CDK1P06493 297 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 RPSAP08865 295 aaKnown RBP4.81□□□□□ -1.64
VPS36-202ENST00000462289 UBCP0CG48 685 aaKnown RBP4.81□□□□□ -1.64
VPS36-202ENST00000462289 DAOP14920 347 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 COL8A2P25067 703 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 MPZP25189 248 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 HSD11B1P28845 292 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 C21orf33P30042 268 aaPredicted RBP4.81□□□□□ -1.64
VPS36-202ENST00000462289 SLC6A9P48067 706 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 PDLIM4P50479 330 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 ETV1P50549 477 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 LMO4P61968 165 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 RPS11P62280 158 aaKnown RBP eCLIP4.81□□□□□ -1.64
VPS36-202ENST00000462289 CCL8P80075 99 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 IL5RAQ01344 420 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 ST3GAL4Q11206 333 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 CDK5R1Q15078 307 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 SNCBQ16143 134 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 C6orf52Q5T4I8 152 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 DMKNQ6E0U4 476 aaPredicted RBP4.81□□□□□ -1.64
VPS36-202ENST00000462289 XAF1Q6GPH4 301 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 IZUMO2Q6UXV1 221 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 FAM57BQ71RH2 274 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 UTS2BQ765I0 119 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 MRPL21Q7Z2W9 205 aaKnown RBP4.81□□□□□ -1.64
VPS36-202ENST00000462289 LYPD6Q86Y78 171 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 CIARTQ8N365 385 aaPredicted RBP4.81□□□□□ -1.64
VPS36-202ENST00000462289 PARP16Q8N5Y8 322 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 ZNF540Q8NDQ6 660 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 OR10H4Q8NGA5 316 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 SNX33Q8WV41 574 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 OR5P3Q8WZ94 311 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 RGP1Q92546 391 aaPredicted RBP4.81□□□□□ -1.64
VPS36-202ENST00000462289 ELMOD3Q96FG2 381 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 PGLYRP3Q96LB9 341 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 Q96MF0 132 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 MYCBPQ99417 103 aaPredicted RBP4.81□□□□□ -1.64
VPS36-202ENST00000462289 ZNF184Q99676 751 aaPredicted RBP4.81□□□□□ -1.64
VPS36-202ENST00000462289 ALG8Q9BVK2 526 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 REG4Q9BYZ8 158 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 OR51B6Q9H340 312 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 ZMAT4Q9H898 229 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 ISG20L2Q9H9L3 353 aaKnown RBP4.81□□□□□ -1.64
VPS36-202ENST00000462289 SEBOXQ9HB31 216 aaPredicted RBP4.81□□□□□ -1.64
VPS36-202ENST00000462289 ABCB9Q9NP78 766 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 DYNLRB1Q9NP97 96 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 GPR84Q9NQS5 396 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 ZNF275Q9NSD4 429 aaPredicted RBP4.81□□□□□ -1.64
VPS36-202ENST00000462289 TMEM100Q9NV29 134 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 UBAP1Q9NZ09 502 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 OR52A1Q9UKL2 312 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 EXOSC1Q9Y3B2 195 aaKnown RBP4.81□□□□□ -1.64
VPS36-202ENST00000462289 NOP16Q9Y3C1 178 aaKnown RBP4.81□□□□□ -1.64
VPS36-202ENST00000462289 RHBDD3Q9Y3P4 386 aa4.81□□□□□ -1.64
VPS36-202ENST00000462289 SIRT4Q9Y6E7 314 aaPredicted RBP4.81□□□□□ -1.64
VPS36-202ENST00000462289 PPIAL4EA0A075B759 164 aa4.8□□□□□ -1.64
VPS36-202ENST00000462289 PPIAL4CA0A0B4J2A2 164 aa4.8□□□□□ -1.64
VPS36-202ENST00000462289 IGHV4-61A0A0C4DH41 118 aa4.8□□□□□ -1.64
VPS36-202ENST00000462289 TRBV5-5A0A0J9YX44 114 aa4.8□□□□□ -1.64
VPS36-202ENST00000462289 ZNF816-ZNF321PA0A0X1KG74 233 aa4.8□□□□□ -1.64
VPS36-202ENST00000462289 A0A1W2PPW3 197 aa4.8□□□□□ -1.64
VPS36-202ENST00000462289 DAPL1A0PJW8 107 aa4.8□□□□□ -1.64
VPS36-202ENST00000462289 PQLC2LA1A4F0 135 aa4.8□□□□□ -1.64
VPS36-202ENST00000462289 TRIM64BA6NI03 449 aa4.8□□□□□ -1.64
VPS36-202ENST00000462289 TRIM64CA6NLI5 447 aa4.8□□□□□ -1.64
VPS36-202ENST00000462289 TMEM210A6NLX4 147 aa4.8□□□□□ -1.64
VPS36-202ENST00000462289 TMEM212A6NML5 194 aa4.8□□□□□ -1.64
VPS36-202ENST00000462289 A8MXK9 166 aa4.8□□□□□ -1.64
VPS36-202ENST00000462289 SRRM5B3KS81 715 aa4.8□□□□□ -1.64
VPS36-202ENST00000462289 PPIAL4DF5H284 164 aa4.8□□□□□ -1.64
VPS36-202ENST00000462289 F5H5P2 479 aa4.8□□□□□ -1.64
VPS36-202ENST00000462289 H0YHG0 523 aa4.8□□□□□ -1.64
VPS36-202ENST00000462289 TMEM178BH3BS89 294 aa4.8□□□□□ -1.64
VPS36-202ENST00000462289 HOXA3O43365 443 aaPredicted RBP4.8□□□□□ -1.64
VPS36-202ENST00000462289 PLPP2O43688 288 aa4.8□□□□□ -1.64
VPS36-202ENST00000462289 SSX4O60224 188 aa4.8□□□□□ -1.64
VPS36-202ENST00000462289 MRPS14O60783 128 aaKnown RBP4.8□□□□□ -1.64
VPS36-202ENST00000462289 NOS1APO75052 506 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms