RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 SCRT1Q9BWW7 348 aa16.19■□□□□ 0.18
HPS3-204ENST00000462030 TUBD1Q9UJT1 453 aa16.19■□□□□ 0.18
HPS3-204ENST00000462030 RAMP1O60894 148 aa16.19■□□□□ 0.18
HPS3-204ENST00000462030 S100A9P06702 114 aaKnown RBP16.19■□□□□ 0.18
HPS3-204ENST00000462030 KLK2P20151 261 aa16.19■□□□□ 0.18
HPS3-204ENST00000462030 FHITP49789 147 aa16.19■□□□□ 0.18
HPS3-204ENST00000462030 CFHR1Q03591 330 aa16.19■□□□□ 0.18
HPS3-204ENST00000462030 ZNF616Q08AN1 781 aa16.19■□□□□ 0.18
HPS3-204ENST00000462030 RNF212Q495C1 297 aa16.19■□□□□ 0.18
HPS3-204ENST00000462030 SLC25A47Q6Q0C1 308 aa16.19■□□□□ 0.18
HPS3-204ENST00000462030 C6orf201Q7Z4U5 140 aa16.19■□□□□ 0.18
HPS3-204ENST00000462030 C17orf82Q86X59 251 aaPredicted RBP16.19■□□□□ 0.18
HPS3-204ENST00000462030 APCDD1LQ8NCL9 501 aa16.19■□□□□ 0.18
HPS3-204ENST00000462030 POC1BQ8TC44 478 aa16.19■□□□□ 0.18
HPS3-204ENST00000462030 SPACA1Q9HBV2 294 aa16.19■□□□□ 0.18
HPS3-204ENST00000462030 NIT2Q9NQR4 276 aa16.19■□□□□ 0.18
HPS3-204ENST00000462030 hCG_1809904A0A1W2PP81 198 aa16.18■□□□□ 0.18
HPS3-204ENST00000462030 A0A1W2PR64 198 aa16.18■□□□□ 0.18
HPS3-204ENST00000462030 A0A1W2PRV1 198 aa16.18■□□□□ 0.18
HPS3-204ENST00000462030 RHPN2P1A8MT19 583 aa16.18■□□□□ 0.18
HPS3-204ENST00000462030 M0R036 132 aa16.18■□□□□ 0.18
HPS3-204ENST00000462030 ACKR3P25106 362 aa16.18■□□□□ 0.18
HPS3-204ENST00000462030 ZNF561Q8N587 486 aa16.18■□□□□ 0.18
HPS3-204ENST00000462030 TPSD1Q9BZJ3 242 aa16.18■□□□□ 0.18
HPS3-204ENST00000462030 RGCCQ9H4X1 137 aa16.18■□□□□ 0.18
HPS3-204ENST00000462030 ELL3Q9HB65 397 aaPredicted RBP16.18■□□□□ 0.18
HPS3-204ENST00000462030 A0A1B0GX78 115 aa16.18■□□□□ 0.18
HPS3-204ENST00000462030 SHISA7A6NL88 538 aa16.18■□□□□ 0.18
HPS3-204ENST00000462030 MSTNO14793 375 aa16.18■□□□□ 0.18
HPS3-204ENST00000462030 PRF1P14222 555 aa16.18■□□□□ 0.18
HPS3-204ENST00000462030 SUMO3P55854 103 aaPredicted RBP16.18■□□□□ 0.18
HPS3-204ENST00000462030 SMAD4Q13485 552 aaKnown RBP16.18■□□□□ 0.18
HPS3-204ENST00000462030 UBE2V2Q15819 145 aa16.18■□□□□ 0.18
HPS3-204ENST00000462030 GUK1Q16774 197 aa16.18■□□□□ 0.18
HPS3-204ENST00000462030 SGPP2Q8IWX5 399 aa16.18■□□□□ 0.18
HPS3-204ENST00000462030 UBAC2Q8NBM4 344 aa16.18■□□□□ 0.18
HPS3-204ENST00000462030 RAB33BQ9H082 229 aa16.18■□□□□ 0.18
HPS3-204ENST00000462030 NKX2-4Q9H2Z4 354 aa16.18■□□□□ 0.18
HPS3-204ENST00000462030 SEBOXQ9HB31 216 aaPredicted RBP16.18■□□□□ 0.18
HPS3-204ENST00000462030 KLRF1Q9NZS2 232 aa16.18■□□□□ 0.18
HPS3-204ENST00000462030 CRYM-AS1A6NIL9 109 aa16.17■□□□□ 0.18
HPS3-204ENST00000462030 MASP2O00187 686 aa16.17■□□□□ 0.18
HPS3-204ENST00000462030 QDPRP09417 244 aa16.17■□□□□ 0.18
HPS3-204ENST00000462030 NAT2P11245 290 aa16.17■□□□□ 0.18
HPS3-204ENST00000462030 ZNF14P17017 642 aaPredicted RBP16.17■□□□□ 0.18
HPS3-204ENST00000462030 HMGN3Q15651 99 aa16.17■□□□□ 0.18
HPS3-204ENST00000462030 FAM209BQ5JX69 171 aa16.17■□□□□ 0.18
HPS3-204ENST00000462030 PPP1R3BQ86XI6 285 aa16.17■□□□□ 0.18
HPS3-204ENST00000462030 TCEAL3Q969E4 200 aa16.17■□□□□ 0.18
HPS3-204ENST00000462030 RSRP1Q9BUV0 290 aa16.17■□□□□ 0.18
HPS3-204ENST00000462030 WFDC1Q9HC57 220 aa16.17■□□□□ 0.18
HPS3-204ENST00000462030 FAM212BQ9NTI7 297 aaPredicted RBP16.17■□□□□ 0.18
HPS3-204ENST00000462030 SERPINE3A8MV23 424 aa16.17■□□□□ 0.18
HPS3-204ENST00000462030 C1QL1O75973 258 aa16.17■□□□□ 0.18
HPS3-204ENST00000462030 ZNF205O95201 554 aa16.17■□□□□ 0.18
HPS3-204ENST00000462030 FAHP16930 419 aa16.17■□□□□ 0.18
HPS3-204ENST00000462030 GABRR1P24046 479 aa16.17■□□□□ 0.18
HPS3-204ENST00000462030 RSPO4Q2I0M5 234 aaPredicted RBP16.17■□□□□ 0.18
HPS3-204ENST00000462030 PIGTQ969N2 578 aa16.17■□□□□ 0.18
HPS3-204ENST00000462030 PGAM5Q96HS1 289 aa16.17■□□□□ 0.18
HPS3-204ENST00000462030 LIME1Q9H400 295 aa16.17■□□□□ 0.18
HPS3-204ENST00000462030 TRAV20A0A0B4J274 112 aa16.16■□□□□ 0.18
HPS3-204ENST00000462030 IFNA21P01568 189 aa16.16■□□□□ 0.18
HPS3-204ENST00000462030 CTSDP07339 412 aaPredicted RBP16.16■□□□□ 0.18
HPS3-204ENST00000462030 FCGR2AP12318 317 aa16.16■□□□□ 0.18
HPS3-204ENST00000462030 ZNF41P51814 821 aaPredicted RBP16.16■□□□□ 0.18
HPS3-204ENST00000462030 PLPPR5Q32ZL2 321 aa16.16■□□□□ 0.18
HPS3-204ENST00000462030 SP6Q3SY56 376 aa16.16■□□□□ 0.18
HPS3-204ENST00000462030 C14orf28Q4W4Y0 310 aa16.16■□□□□ 0.18
HPS3-204ENST00000462030 EIF5A2Q9GZV4 153 aaKnown RBP16.16■□□□□ 0.18
HPS3-204ENST00000462030 PPP4R1LQ9P1A2 415 aa16.16■□□□□ 0.18
HPS3-204ENST00000462030 GHRLQ9UBU3 117 aa16.16■□□□□ 0.18
HPS3-204ENST00000462030 MED19A0JLT2 244 aaPredicted RBP16.16■□□□□ 0.18
HPS3-204ENST00000462030 MBPP02686 304 aaPredicted RBP16.16■□□□□ 0.18
HPS3-204ENST00000462030 ARG1P05089 322 aa16.16■□□□□ 0.18
HPS3-204ENST00000462030 PLPP5Q8NEB5 264 aa16.16■□□□□ 0.18
HPS3-204ENST00000462030 TM2D1Q9BX74 207 aa16.16■□□□□ 0.18
HPS3-204ENST00000462030 ARV1Q9H2C2 271 aa16.16■□□□□ 0.18
HPS3-204ENST00000462030 METTL1Q9UBP6 276 aaKnown RBP16.16■□□□□ 0.18
HPS3-204ENST00000462030 XRCC2O43543 280 aa16.15■□□□□ 0.18
HPS3-204ENST00000462030 DANCRP0C864 163 aa16.15■□□□□ 0.18
HPS3-204ENST00000462030 RAB5AP20339 215 aa16.15■□□□□ 0.18
HPS3-204ENST00000462030 ALDH3B1P43353 468 aa16.15■□□□□ 0.18
HPS3-204ENST00000462030 LURAP1LQ8IV03 231 aa16.15■□□□□ 0.18
HPS3-204ENST00000462030 TMEM156Q8N614 296 aa16.15■□□□□ 0.18
HPS3-204ENST00000462030 SLC25A43Q8WUT9 341 aaPredicted RBP16.15■□□□□ 0.18
HPS3-204ENST00000462030 TAAR9Q96RI9 348 aa16.15■□□□□ 0.18
HPS3-204ENST00000462030 PADI1Q9ULC6 663 aa16.15■□□□□ 0.18
HPS3-204ENST00000462030 DIRAS3O95661 229 aa16.14■□□□□ 0.18
HPS3-204ENST00000462030 OR8U8P0C7N1 319 aa16.14■□□□□ 0.18
HPS3-204ENST00000462030 CD38P28907 300 aa16.14■□□□□ 0.18
HPS3-204ENST00000462030 GLP1RP43220 463 aa16.14■□□□□ 0.18
HPS3-204ENST00000462030 CAMLGP49069 296 aa16.14■□□□□ 0.18
HPS3-204ENST00000462030 POLR2GP62487 172 aaKnown RBP eCLIP16.14■□□□□ 0.18
HPS3-204ENST00000462030 D2HGDHQ8N465 521 aa16.14■□□□□ 0.18
HPS3-204ENST00000462030 FAM24BQ8N5W8 94 aa16.14■□□□□ 0.18
HPS3-204ENST00000462030 MRPL38Q96DV4 380 aaKnown RBP16.14■□□□□ 0.18
HPS3-204ENST00000462030 MRGPRX4Q96LA9 322 aa16.14■□□□□ 0.18
HPS3-204ENST00000462030 SH3BGRL3Q9H299 93 aa16.14■□□□□ 0.18
HPS3-204ENST00000462030 PLEKHA2Q9HB19 425 aa16.14■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms