RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 KCNE4Q8WWG9 221 aa10.9□□□□□ -0.66
COL4A6-204ENST00000461897 OCSTAMPQ9BR26 566 aa10.9□□□□□ -0.66
COL4A6-204ENST00000461897 RNF126Q9BV68 326 aa10.9□□□□□ -0.66
COL4A6-204ENST00000461897 ZNF416Q9BWM5 594 aa10.9□□□□□ -0.66
COL4A6-204ENST00000461897 RAB18Q9NP72 206 aa10.9□□□□□ -0.66
COL4A6-204ENST00000461897 LHFPL6Q9Y693 200 aa10.9□□□□□ -0.66
COL4A6-204ENST00000461897 TMEM218A2RU14 115 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 OR5H15A6NDH6 313 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 GJE1A6NN92 205 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 IGHG1P01857 330 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 TPT1P13693 172 aaKnown RBP10.89□□□□□ -0.67
COL4A6-204ENST00000461897 HIST1H1DP16402 221 aaKnown RBP10.89□□□□□ -0.67
COL4A6-204ENST00000461897 CBX5P45973 191 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 SLC6A9P48067 706 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 RRADP55042 308 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 FLI1Q01543 452 aaPredicted RBP10.89□□□□□ -0.67
COL4A6-204ENST00000461897 RTP5Q14D33 572 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 DRAM2Q6UX65 266 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 OR1S2Q8NGQ3 325 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 OR13C9Q8NGT0 318 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 ADGRG7Q96K78 797 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 TTTY12Q9BZ98 90 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 PCDHB16Q9NRJ7 776 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 CYTL1Q9NRR1 136 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 KLF2Q9Y5W3 355 aaPredicted RBP10.89□□□□□ -0.67
COL4A6-204ENST00000461897 SPENQ96T58 3664 aaKnown RBP10.89□□□□□ -0.67
COL4A6-204ENST00000461897 FAM74A7A6NL05 159 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 SMAD9O15198 467 aaKnown RBP10.89□□□□□ -0.67
COL4A6-204ENST00000461897 NME2P1O60361 137 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 CDC14BO60729 498 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 SFT2D2O95562 160 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 CELA3AP09093 270 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 NME2P22392 152 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 FPR2P25090 351 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 SERPINF1P36955 418 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 SUCLG1P53597 346 aaKnown RBP10.89□□□□□ -0.67
COL4A6-204ENST00000461897 CLDN15P56746 228 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 CLRN1P58418 232 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 MICBQ29980 383 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 FAM74A3Q4VXF1 159 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 BEX5Q5H9J7 111 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 PLAC9Q5JTB6 97 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 CARD17Q5XLA6 110 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 SLC25A47Q6Q0C1 308 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 GALNTL5Q7Z4T8 443 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 LHFPL1Q86WI0 220 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 FAM89BQ8N5H3 189 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 MARCH1Q8TCQ1 289 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 TMEM230Q96A57 120 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 SCGB3A2Q96PL1 93 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 C5orf66Q9H5L9 145 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 ZNF552Q9H707 407 aaPredicted RBP10.89□□□□□ -0.67
COL4A6-204ENST00000461897 CARHSP1Q9Y2V2 147 aaKnown RBP10.89□□□□□ -0.67
COL4A6-204ENST00000461897 CSAG2Q9Y5P2 127 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 LAMA5O15230 3695 aa10.89□□□□□ -0.67
COL4A6-204ENST00000461897 FAM25EA8MYX2 175 aa10.88□□□□□ -0.67
COL4A6-204ENST00000461897 EEF1E1-BLOC1S5C9J1V9 151 aa10.88□□□□□ -0.67
COL4A6-204ENST00000461897 MFNGO00587 321 aa10.88□□□□□ -0.67
COL4A6-204ENST00000461897 NUPL2O15504 423 aaKnown RBP10.88□□□□□ -0.67
COL4A6-204ENST00000461897 DNPH1O43598 174 aa10.88□□□□□ -0.67
COL4A6-204ENST00000461897 PMP2P02689 132 aa10.88□□□□□ -0.67
COL4A6-204ENST00000461897 HPNP05981 417 aa10.88□□□□□ -0.67
COL4A6-204ENST00000461897 SP1P08047 785 aa10.88□□□□□ -0.67
COL4A6-204ENST00000461897 PGAM2P15259 253 aa10.88□□□□□ -0.67
COL4A6-204ENST00000461897 ZNF20P17024 532 aa10.88□□□□□ -0.67
COL4A6-204ENST00000461897 AKR1C4P17516 323 aa10.88□□□□□ -0.67
COL4A6-204ENST00000461897 VAMP1P23763 118 aa10.88□□□□□ -0.67
COL4A6-204ENST00000461897 ALDH3B1P43353 468 aa10.88□□□□□ -0.67
COL4A6-204ENST00000461897 CLDN17P56750 224 aa10.88□□□□□ -0.67
COL4A6-204ENST00000461897 RAC3P60763 192 aa10.88□□□□□ -0.67
COL4A6-204ENST00000461897 DEFA5Q01523 94 aa10.88□□□□□ -0.67
COL4A6-204ENST00000461897 CLN3Q13286 438 aa10.88□□□□□ -0.67
COL4A6-204ENST00000461897 MFAP5Q13361 173 aa10.88□□□□□ -0.67
COL4A6-204ENST00000461897 ATXN7L3Q14CW9 347 aaPredicted RBP10.88□□□□□ -0.67
COL4A6-204ENST00000461897 HIST3H3Q16695 136 aa10.88□□□□□ -0.67
COL4A6-204ENST00000461897 GLIPR1L1Q6UWM5 242 aa10.88□□□□□ -0.67
COL4A6-204ENST00000461897 BAP18Q8IXM2 172 aa10.88□□□□□ -0.67
COL4A6-204ENST00000461897 OR51E1Q8TCB6 317 aa10.88□□□□□ -0.67
COL4A6-204ENST00000461897 CASTOR1Q8WTX7 329 aa10.88□□□□□ -0.67
COL4A6-204ENST00000461897 RAB3CQ96E17 227 aa10.88□□□□□ -0.67
COL4A6-204ENST00000461897 ZNF385AQ96PM9 386 aaKnown RBP10.88□□□□□ -0.67
COL4A6-204ENST00000461897 NICN1Q9BSH3 213 aa10.88□□□□□ -0.67
COL4A6-204ENST00000461897 NAA11Q9BSU3 229 aaPredicted RBP10.88□□□□□ -0.67
COL4A6-204ENST00000461897 PNRC2Q9NPJ4 139 aaKnown RBP10.88□□□□□ -0.67
COL4A6-204ENST00000461897 B4GALT7Q9UBV7 327 aa10.88□□□□□ -0.67
COL4A6-204ENST00000461897 MRPS28Q9Y2Q9 187 aaKnown RBP10.88□□□□□ -0.67
COL4A6-204ENST00000461897 PHF3Q92576 2039 aaKnown RBP10.88□□□□□ -0.67
COL4A6-204ENST00000461897 C5orf51A6NDU8 294 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 FAM166BA8MTA8 275 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 FOXI3A8MTJ6 420 aaPredicted RBP10.87□□□□□ -0.67
COL4A6-204ENST00000461897 H0YIZ8 118 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 VAMP5O95183 116 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 PRF1P14222 555 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 CTSSP25774 331 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 MAGEA5P43359 124 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 TMEM50BP56557 158 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 IL15RAQ13261 267 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 PRSS54Q6PEW0 395 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 KCTD9Q7L273 389 aa10.87□□□□□ -0.67
COL4A6-204ENST00000461897 SVBPQ8N300 66 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms