RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 NDUFB7P17568 137 aa11.49□□□□□ -0.57
USP4-206ENST00000461553 AMY2BP19961 511 aa11.49□□□□□ -0.57
USP4-206ENST00000461553 OMGP23515 440 aa11.49□□□□□ -0.57
USP4-206ENST00000461553 GABRA2P47869 451 aa11.49□□□□□ -0.57
USP4-206ENST00000461553 TGM4P49221 684 aa11.49□□□□□ -0.57
USP4-206ENST00000461553 RAG2P55895 527 aa11.49□□□□□ -0.57
USP4-206ENST00000461553 SMIM21Q3B7S5 101 aa11.49□□□□□ -0.57
USP4-206ENST00000461553 ZNF684Q5T5D7 378 aa11.49□□□□□ -0.57
USP4-206ENST00000461553 KDM4DQ6B0I6 523 aa11.49□□□□□ -0.57
USP4-206ENST00000461553 HAGHLQ6PII5 290 aaPredicted RBP11.49□□□□□ -0.57
USP4-206ENST00000461553 METAP1DQ6UB28 335 aaPredicted RBP11.49□□□□□ -0.57
USP4-206ENST00000461553 ZNF788Q6ZQV5 615 aa11.49□□□□□ -0.57
USP4-206ENST00000461553 MOB3CQ70IA8 216 aa11.49□□□□□ -0.57
USP4-206ENST00000461553 KRT74Q7RTS7 529 aa11.49□□□□□ -0.57
USP4-206ENST00000461553 BCDIN3DQ7Z5W3 292 aaKnown RBP11.49□□□□□ -0.57
USP4-206ENST00000461553 LY6G5BQ8NDX9 201 aa11.49□□□□□ -0.57
USP4-206ENST00000461553 OR4F5Q8NH21 305 aa11.49□□□□□ -0.57
USP4-206ENST00000461553 C8orf46Q8TAG6 207 aa11.49□□□□□ -0.57
USP4-206ENST00000461553 ZNF671Q8TAW3 534 aa11.49□□□□□ -0.57
USP4-206ENST00000461553 TBC1D15Q8TC07 691 aa11.49□□□□□ -0.57
USP4-206ENST00000461553 TAF15Q92804 592 aaKnown RBP eCLIP11.49□□□□□ -0.57
USP4-206ENST00000461553 OR51I2Q9H344 312 aa11.49□□□□□ -0.57
USP4-206ENST00000461553 CLN6Q9NWW5 311 aa11.49□□□□□ -0.57
USP4-206ENST00000461553 CAB39Q9Y376 341 aaPredicted RBP11.49□□□□□ -0.57
USP4-206ENST00000461553 AP4S1Q9Y587 144 aa11.49□□□□□ -0.57
USP4-206ENST00000461553 R4GMQ9 66 aa11.49□□□□□ -0.57
USP4-206ENST00000461553 KNG1P01042 644 aa11.48□□□□□ -0.57
USP4-206ENST00000461553 NRASP01111 189 aa11.48□□□□□ -0.57
USP4-206ENST00000461553 TFF1P04155 84 aa11.48□□□□□ -0.57
USP4-206ENST00000461553 EEF1B2P24534 225 aaKnown RBP11.48□□□□□ -0.57
USP4-206ENST00000461553 EPHA2P29317 976 aa11.48□□□□□ -0.57
USP4-206ENST00000461553 CAV3P56539 151 aa11.48□□□□□ -0.57
USP4-206ENST00000461553 RPL15P61313 204 aaKnown RBP11.48□□□□□ -0.57
USP4-206ENST00000461553 EGR3Q06889 387 aa11.48□□□□□ -0.57
USP4-206ENST00000461553 DGUOKQ16854 277 aa11.48□□□□□ -0.57
USP4-206ENST00000461553 PRR31Q5SQ13 230 aa11.48□□□□□ -0.57
USP4-206ENST00000461553 AADACL4Q5VUY2 407 aa11.48□□□□□ -0.57
USP4-206ENST00000461553 PLEKHG7Q6ZR37 379 aa11.48□□□□□ -0.57
USP4-206ENST00000461553 AMIGO2Q86SJ2 522 aa11.48□□□□□ -0.57
USP4-206ENST00000461553 LDLRAD3Q86YD5 345 aa11.48□□□□□ -0.57
USP4-206ENST00000461553 TMEM185AQ8NFB2 350 aa11.48□□□□□ -0.57
USP4-206ENST00000461553 OR5A2Q8NGI9 324 aa11.48□□□□□ -0.57
USP4-206ENST00000461553 OR51G2Q8NGK0 314 aa11.48□□□□□ -0.57
USP4-206ENST00000461553 LRTOMTQ8WZ04 291 aa11.48□□□□□ -0.57
USP4-206ENST00000461553 IL4I1Q96RQ9 567 aa11.48□□□□□ -0.57
USP4-206ENST00000461553 CIB1Q99828 191 aa11.48□□□□□ -0.57
USP4-206ENST00000461553 SLITRK2Q9H156 845 aa11.48□□□□□ -0.57
USP4-206ENST00000461553 ZNF696Q9H7X3 374 aa11.48□□□□□ -0.57
USP4-206ENST00000461553 PLEKHA1Q9HB21 404 aa11.48□□□□□ -0.57
USP4-206ENST00000461553 BEX1Q9HBH7 125 aa11.48□□□□□ -0.57
USP4-206ENST00000461553 OR52A1Q9UKL2 312 aa11.48□□□□□ -0.57
USP4-206ENST00000461553 FAM96BQ9Y3D0 163 aa11.48□□□□□ -0.57
USP4-206ENST00000461553 MMP24Q9Y5R2 645 aa11.48□□□□□ -0.57
USP4-206ENST00000461553 BTBD17A6NE02 478 aa11.47□□□□□ -0.57
USP4-206ENST00000461553 J3QT63 122 aa11.47□□□□□ -0.57
USP4-206ENST00000461553 M0R1W7 72 aa11.47□□□□□ -0.57
USP4-206ENST00000461553 SRSF10O75494 262 aaKnown RBP11.47□□□□□ -0.57
USP4-206ENST00000461553 NDUFA7O95182 113 aa11.47□□□□□ -0.57
USP4-206ENST00000461553 KRT8P05787 483 aa11.47□□□□□ -0.57
USP4-206ENST00000461553 ACAA1P09110 424 aaPredicted RBP11.47□□□□□ -0.57
USP4-206ENST00000461553 FBP1P09467 338 aa11.47□□□□□ -0.57
USP4-206ENST00000461553 CAPZA1P52907 286 aa11.47□□□□□ -0.57
USP4-206ENST00000461553 BLMHQ13867 455 aa11.47□□□□□ -0.57
USP4-206ENST00000461553 DMRTC1Q5HYR2 192 aa11.47□□□□□ -0.57
USP4-206ENST00000461553 CLVS2Q5SYC1 327 aa11.47□□□□□ -0.57
USP4-206ENST00000461553 NCR3LG1Q68D85 454 aa11.47□□□□□ -0.57
USP4-206ENST00000461553 C17orf107Q6ZR85 190 aa11.47□□□□□ -0.57
USP4-206ENST00000461553 NPRL2Q8WTW4 380 aa11.47□□□□□ -0.57
USP4-206ENST00000461553 AQP3Q92482 292 aa11.47□□□□□ -0.57
USP4-206ENST00000461553 DYRK2Q92630 601 aa11.47□□□□□ -0.57
USP4-206ENST00000461553 DUS3LQ96G46 650 aaKnown RBP11.47□□□□□ -0.57
USP4-206ENST00000461553 TBX5Q99593 518 aa11.47□□□□□ -0.57
USP4-206ENST00000461553 APOL4Q9BPW4 351 aa11.47□□□□□ -0.57
USP4-206ENST00000461553 DPAGT1Q9H3H5 408 aa11.47□□□□□ -0.57
USP4-206ENST00000461553 RIBC2Q9H4K1 309 aa11.47□□□□□ -0.57
USP4-206ENST00000461553 ELL3Q9HB65 397 aaPredicted RBP11.47□□□□□ -0.57
USP4-206ENST00000461553 WARS2Q9UGM6 360 aaKnown RBP11.47□□□□□ -0.57
USP4-206ENST00000461553 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.47□□□□□ -0.57
USP4-206ENST00000461553 POLDIP2Q9Y2S7 368 aa11.47□□□□□ -0.57
USP4-206ENST00000461553 SNX5Q9Y5X3 404 aa11.47□□□□□ -0.57
USP4-206ENST00000461553 WNK1Q9H4A3 2382 aa11.46□□□□□ -0.57
USP4-206ENST00000461553 IGKV1D-17A0A075B6S4 117 aa11.46□□□□□ -0.57
USP4-206ENST00000461553 TRBV23-1A0A0A0MS06 115 aa11.46□□□□□ -0.57
USP4-206ENST00000461553 DHRS7CA6NNS2 312 aa11.46□□□□□ -0.57
USP4-206ENST00000461553 PAHP00439 452 aa11.46□□□□□ -0.57
USP4-206ENST00000461553 IGHV4-59P01825 116 aa11.46□□□□□ -0.57
USP4-206ENST00000461553 PSG2P11465 335 aa11.46□□□□□ -0.57
USP4-206ENST00000461553 HAAOP46952 286 aa11.46□□□□□ -0.57
USP4-206ENST00000461553 KLRD1Q13241 179 aa11.46□□□□□ -0.57
USP4-206ENST00000461553 ZNF573Q86YE8 665 aa11.46□□□□□ -0.57
USP4-206ENST00000461553 ELMOD2Q8IZ81 293 aa11.46□□□□□ -0.57
USP4-206ENST00000461553 FAM185AQ8N0U4 392 aa11.46□□□□□ -0.57
USP4-206ENST00000461553 PIP4P2Q8N4L2 257 aa11.46□□□□□ -0.57
USP4-206ENST00000461553 YIPF7Q8N8F6 280 aa11.46□□□□□ -0.57
USP4-206ENST00000461553 POC1AQ8NBT0 407 aa11.46□□□□□ -0.57
USP4-206ENST00000461553 WFDC12Q8WWY7 111 aa11.46□□□□□ -0.57
USP4-206ENST00000461553 PPP1R14AQ96A00 147 aa11.46□□□□□ -0.57
USP4-206ENST00000461553 GABARAPL3Q9BY60 117 aa11.46□□□□□ -0.57
USP4-206ENST00000461553 SEMA6AQ9H2E6 1030 aa11.46□□□□□ -0.57
USP4-206ENST00000461553 GPR173Q9NS66 373 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms