RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 TNFRSF11BO00300 401 aa2.31□□□□□ -2.04
CLK1-206ENST00000461326 WISP3O95389 354 aaPredicted RBP2.31□□□□□ -2.04
CLK1-206ENST00000461326 LCA5LO95447 670 aa2.31□□□□□ -2.04
CLK1-206ENST00000461326 PTHP01270 115 aa2.31□□□□□ -2.04
CLK1-206ENST00000461326 IGHV3-11P01762 117 aa2.31□□□□□ -2.04
CLK1-206ENST00000461326 HLA-DQA1P01909 254 aa2.31□□□□□ -2.04
CLK1-206ENST00000461326 MRPL3P09001 348 aaKnown RBP2.31□□□□□ -2.04
CLK1-206ENST00000461326 ZNF688P0C7X2 276 aa2.31□□□□□ -2.04
CLK1-206ENST00000461326 ZNF32P17041 273 aa2.31□□□□□ -2.04
CLK1-206ENST00000461326 CSKP41240 450 aa2.31□□□□□ -2.04
CLK1-206ENST00000461326 RPL23P62829 140 aaKnown RBP2.31□□□□□ -2.04
CLK1-206ENST00000461326 CRADDP78560 199 aa2.31□□□□□ -2.04
CLK1-206ENST00000461326 ZNF266Q14584 549 aa2.31□□□□□ -2.04
CLK1-206ENST00000461326 GCSAMLQ5JQS6 135 aa2.31□□□□□ -2.04
CLK1-206ENST00000461326 TMEM205Q6UW68 189 aa2.31□□□□□ -2.04
CLK1-206ENST00000461326 SLC16A13Q7RTY0 426 aa2.31□□□□□ -2.04
CLK1-206ENST00000461326 OR2W3Q7Z3T1 314 aa2.31□□□□□ -2.04
CLK1-206ENST00000461326 WDFY1Q8IWB7 410 aa2.31□□□□□ -2.04
CLK1-206ENST00000461326 GATSQ8NAP1 163 aa2.31□□□□□ -2.04
CLK1-206ENST00000461326 TMEM104Q8NE00 496 aa2.31□□□□□ -2.04
CLK1-206ENST00000461326 OR5AR1Q8NGP9 310 aa2.31□□□□□ -2.04
CLK1-206ENST00000461326 OR9A2Q8NGT5 310 aa2.31□□□□□ -2.04
CLK1-206ENST00000461326 OR6N1Q8NGY5 312 aa2.31□□□□□ -2.04
CLK1-206ENST00000461326 LILRB4Q8NHJ6 448 aa2.31□□□□□ -2.04
CLK1-206ENST00000461326 SYNPRQ8TBG9 265 aa2.31□□□□□ -2.04
CLK1-206ENST00000461326 MITD1Q8WV92 249 aa2.31□□□□□ -2.04
CLK1-206ENST00000461326 ASZ1Q8WWH4 475 aa2.31□□□□□ -2.04
CLK1-206ENST00000461326 FRZBQ92765 325 aa2.31□□□□□ -2.04
CLK1-206ENST00000461326 ZNF488Q96MN9 340 aa2.31□□□□□ -2.04
CLK1-206ENST00000461326 SCGB3A2Q96PL1 93 aa2.31□□□□□ -2.04
CLK1-206ENST00000461326 SPIN2AQ99865 258 aa2.31□□□□□ -2.04
CLK1-206ENST00000461326 SPIN2BQ9BPZ2 258 aa2.31□□□□□ -2.04
CLK1-206ENST00000461326 EMC6Q9BV81 110 aa2.31□□□□□ -2.04
CLK1-206ENST00000461326 SAMD10Q9BYL1 202 aa2.31□□□□□ -2.04
CLK1-206ENST00000461326 OR52D1Q9H346 318 aa2.31□□□□□ -2.04
CLK1-206ENST00000461326 NECAP2Q9NVZ3 263 aa2.31□□□□□ -2.04
CLK1-206ENST00000461326 ADCY9O60503 1353 aa2.31□□□□□ -2.04
CLK1-206ENST00000461326 ABCC12Q96J65 1359 aa2.31□□□□□ -2.04
CLK1-206ENST00000461326 SBF1O95248 1867 aa2.31□□□□□ -2.04
CLK1-206ENST00000461326 FER1L6Q2WGJ9 1857 aa2.31□□□□□ -2.04
CLK1-206ENST00000461326 NUP214P35658 2090 aaPredicted RBP2.3□□□□□ -2.04
CLK1-206ENST00000461326 HACD1B0YJ81 288 aa2.3□□□□□ -2.04
CLK1-206ENST00000461326 KRBOX1C9JBD0 128 aa2.3□□□□□ -2.04
CLK1-206ENST00000461326 ZNF207O43670 478 aaKnown RBP2.3□□□□□ -2.04
CLK1-206ENST00000461326 NMT2O60551 498 aa2.3□□□□□ -2.04
CLK1-206ENST00000461326 EIF1BO60739 113 aaKnown RBP2.3□□□□□ -2.04
CLK1-206ENST00000461326 PAHP00439 452 aa2.3□□□□□ -2.04
CLK1-206ENST00000461326 MBP02144 154 aa2.3□□□□□ -2.04
CLK1-206ENST00000461326 CATP04040 527 aaKnown RBP2.3□□□□□ -2.04
CLK1-206ENST00000461326 CD74P04233 296 aa2.3□□□□□ -2.04
CLK1-206ENST00000461326 IGKV5-2P06315 115 aa2.3□□□□□ -2.04
CLK1-206ENST00000461326 RHOXF2BP0C7M4 288 aa2.3□□□□□ -2.04
CLK1-206ENST00000461326 HOXB8P17481 243 aaPredicted RBP2.3□□□□□ -2.04
CLK1-206ENST00000461326 TUBG1P23258 451 aa2.3□□□□□ -2.04
CLK1-206ENST00000461326 OPRK1P41145 380 aa2.3□□□□□ -2.04
CLK1-206ENST00000461326 EIF1P41567 113 aaKnown RBP2.3□□□□□ -2.04
CLK1-206ENST00000461326 OR1G1P47890 313 aa2.3□□□□□ -2.04
CLK1-206ENST00000461326 CXCL12P48061 93 aa2.3□□□□□ -2.04
CLK1-206ENST00000461326 SERPINB8P50452 374 aa2.3□□□□□ -2.04
CLK1-206ENST00000461326 CCNG1P51959 295 aa2.3□□□□□ -2.04
CLK1-206ENST00000461326 TAS2R46P59540 309 aa2.3□□□□□ -2.04
CLK1-206ENST00000461326 ATP6V0D1P61421 351 aa2.3□□□□□ -2.04
CLK1-206ENST00000461326 PSMC5P62195 406 aa2.3□□□□□ -2.04
CLK1-206ENST00000461326 CACNG7P62955 275 aa2.3□□□□□ -2.04
CLK1-206ENST00000461326 PNOCQ13519 176 aa2.3□□□□□ -2.04
CLK1-206ENST00000461326 EIF4EBP1Q13541 118 aaPredicted RBP2.3□□□□□ -2.04
CLK1-206ENST00000461326 MPV17L2Q567V2 206 aa2.3□□□□□ -2.04
CLK1-206ENST00000461326 LINC00336Q6ZUF6 198 aa2.3□□□□□ -2.04
CLK1-206ENST00000461326 NDUFAF7Q7L592 441 aa2.3□□□□□ -2.04
CLK1-206ENST00000461326 LGI3Q8N145 548 aa2.3□□□□□ -2.04
CLK1-206ENST00000461326 LINC00469Q8N7U9 141 aa2.3□□□□□ -2.04
CLK1-206ENST00000461326 OR4K5Q8NGD3 323 aa2.3□□□□□ -2.04
CLK1-206ENST00000461326 OR6K6Q8NGW6 343 aa2.3□□□□□ -2.04
CLK1-206ENST00000461326 OR10Z1Q8NGY1 313 aa2.3□□□□□ -2.04
CLK1-206ENST00000461326 ARMC7Q9H6L4 198 aa2.3□□□□□ -2.04
CLK1-206ENST00000461326 REEP1Q9H902 201 aa2.3□□□□□ -2.04
CLK1-206ENST00000461326 EXOSC4Q9NPD3 245 aaKnown RBP2.3□□□□□ -2.04
CLK1-206ENST00000461326 ZDHHC4Q9NPG8 344 aa2.3□□□□□ -2.04
CLK1-206ENST00000461326 TUBG2Q9NRH3 451 aa2.3□□□□□ -2.04
CLK1-206ENST00000461326 ADA2Q9NZK5 511 aa2.3□□□□□ -2.04
CLK1-206ENST00000461326 ENOPH1Q9UHY7 261 aa2.3□□□□□ -2.04
CLK1-206ENST00000461326 RFNGQ9Y644 331 aa2.3□□□□□ -2.04
CLK1-206ENST00000461326 SYNRGQ9UMZ2 1314 aa2.3□□□□□ -2.04
CLK1-206ENST00000461326 IGSF9BQ9UPX0 1349 aa2.3□□□□□ -2.04
CLK1-206ENST00000461326 IBTKQ9P2D0 1353 aaPredicted RBP2.3□□□□□ -2.04
CLK1-206ENST00000461326 COL4A1P02462 1669 aa2.3□□□□□ -2.04
CLK1-206ENST00000461326 DICER1Q9UPY3 1922 aaKnown RBP2.3□□□□□ -2.04
CLK1-206ENST00000461326 A0A1B0GUL6 1792 aa2.29□□□□□ -2.04
CLK1-206ENST00000461326 LRRC37AA6NMS7 1700 aa2.29□□□□□ -2.04
CLK1-206ENST00000461326 RIC1Q4ADV7 1423 aa2.29□□□□□ -2.04
CLK1-206ENST00000461326 ZBED9Q6R2W3 1325 aa2.29□□□□□ -2.04
CLK1-206ENST00000461326 ARPC4-TTLL3A0A0A6YYG9 625 aa2.29□□□□□ -2.04
CLK1-206ENST00000461326 IGKV1-8A0A0C4DH67 115 aa2.29□□□□□ -2.04
CLK1-206ENST00000461326 IGHV7-4-1A0A0J9YVY3 117 aa2.29□□□□□ -2.04
CLK1-206ENST00000461326 CENPVL3A0A0U1RRI6 287 aa2.29□□□□□ -2.04
CLK1-206ENST00000461326 GSTTP1A0A1W2PQM5 241 aa2.29□□□□□ -2.04
CLK1-206ENST00000461326 CTNSO60931 367 aa2.29□□□□□ -2.04
CLK1-206ENST00000461326 UPK1BO75841 260 aa2.29□□□□□ -2.04
CLK1-206ENST00000461326 GLSO94925 669 aaPredicted RBP2.29□□□□□ -2.04
CLK1-206ENST00000461326 ETHE1O95571 254 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms