RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 TMEM59Q9BXS4 323 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 RTN4RQ9BZR6 473 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 TGIF2Q9GZN2 237 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 SH3BGRL3Q9H299 93 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 PRO1933Q9H354 126 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 FAM206AQ9NX38 181 aa13.66□□□□□ -0.22
SSR4-206ENST00000460616 GON4LQ3T8J9 2241 aa13.65□□□□□ -0.22
SSR4-206ENST00000460616 A0A0J9YY10 115 aa13.65□□□□□ -0.22
SSR4-206ENST00000460616 A0A1B0GW64 132 aa13.65□□□□□ -0.22
SSR4-206ENST00000460616 BTBD17A6NE02 478 aa13.65□□□□□ -0.22
SSR4-206ENST00000460616 E5RGE8 158 aa13.65□□□□□ -0.22
SSR4-206ENST00000460616 IFNA10P01566 189 aa13.65□□□□□ -0.22
SSR4-206ENST00000460616 SOD3P08294 240 aa13.65□□□□□ -0.22
SSR4-206ENST00000460616 CXCL1P09341 107 aa13.65□□□□□ -0.22
SSR4-206ENST00000460616 TAGLN2P37802 199 aaKnown RBP13.65□□□□□ -0.22
SSR4-206ENST00000460616 DHPSP49366 369 aaPredicted RBP13.65□□□□□ -0.22
SSR4-206ENST00000460616 CD81P60033 236 aa13.65□□□□□ -0.22
SSR4-206ENST00000460616 LSM6P62312 80 aaKnown RBP13.65□□□□□ -0.22
SSR4-206ENST00000460616 IGLV3-21P80748 117 aaPredicted RBP13.65□□□□□ -0.22
SSR4-206ENST00000460616 ELOBQ15370 118 aa13.65□□□□□ -0.22
SSR4-206ENST00000460616 DNLZQ5SXM8 178 aa13.65□□□□□ -0.22
SSR4-206ENST00000460616 ZNF343Q6P1L6 599 aa13.65□□□□□ -0.22
SSR4-206ENST00000460616 LRRC18Q8N456 261 aa13.65□□□□□ -0.22
SSR4-206ENST00000460616 LFNGQ8NES3 379 aa13.65□□□□□ -0.22
SSR4-206ENST00000460616 SNIP1Q8TAD8 396 aaKnown RBP13.65□□□□□ -0.22
SSR4-206ENST00000460616 Q8WTZ3 238 aa13.65□□□□□ -0.22
SSR4-206ENST00000460616 FAM131CQ96AQ9 280 aa13.65□□□□□ -0.22
SSR4-206ENST00000460616 ADOQ96SZ5 270 aa13.65□□□□□ -0.22
SSR4-206ENST00000460616 PBOV1Q9GZY1 135 aa13.65□□□□□ -0.22
SSR4-206ENST00000460616 NELFAQ9H3P2 528 aa13.65□□□□□ -0.22
SSR4-206ENST00000460616 SMDT1Q9H4I9 107 aa13.65□□□□□ -0.22
SSR4-206ENST00000460616 FBRSQ9HAH7 460 aa13.65□□□□□ -0.22
SSR4-206ENST00000460616 SUSD2Q9UGT4 822 aa13.65□□□□□ -0.22
SSR4-206ENST00000460616 CYP8B1Q9UNU6 501 aa13.65□□□□□ -0.22
SSR4-206ENST00000460616 NSG2Q9Y328 171 aa13.65□□□□□ -0.22
SSR4-206ENST00000460616 CLDN16Q9Y5I7 305 aa13.65□□□□□ -0.22
SSR4-206ENST00000460616 ARID1BQ8NFD5 2236 aaPredicted RBP13.65□□□□□ -0.22
SSR4-206ENST00000460616 A0A1W2PP11 408 aa13.65□□□□□ -0.22
SSR4-206ENST00000460616 H3BQ15 152 aa13.65□□□□□ -0.22
SSR4-206ENST00000460616 ZNF20P17024 532 aa13.65□□□□□ -0.22
SSR4-206ENST00000460616 PPP1CCP36873 323 aaKnown RBP13.65□□□□□ -0.22
SSR4-206ENST00000460616 GABRA4P48169 554 aa13.65□□□□□ -0.22
SSR4-206ENST00000460616 KHDC3LQ587J8 217 aa13.65□□□□□ -0.22
SSR4-206ENST00000460616 KLHL24Q6TFL4 600 aa13.65□□□□□ -0.22
SSR4-206ENST00000460616 SGPP2Q8IWX5 399 aa13.65□□□□□ -0.22
SSR4-206ENST00000460616 HIST3H2BBQ8N257 126 aa13.65□□□□□ -0.22
SSR4-206ENST00000460616 MRPL24Q96A35 216 aaKnown RBP13.65□□□□□ -0.22
SSR4-206ENST00000460616 LURAP1Q96LR2 239 aa13.65□□□□□ -0.22
SSR4-206ENST00000460616 FAM60AQ9NP50 221 aa13.65□□□□□ -0.22
SSR4-206ENST00000460616 URGCP-MRPS24S4R325 110 aa13.65□□□□□ -0.22
SSR4-206ENST00000460616 A6NCN8 305 aa13.64□□□□□ -0.23
SSR4-206ENST00000460616 ZNF726A6NNF4 738 aa13.64□□□□□ -0.23
SSR4-206ENST00000460616 C17orf51A8MQB3 221 aa13.64□□□□□ -0.23
SSR4-206ENST00000460616 PLPP3O14495 311 aa13.64□□□□□ -0.23
SSR4-206ENST00000460616 PLRG1O43660 514 aaKnown RBP13.64□□□□□ -0.23
SSR4-206ENST00000460616 CRTAPO75718 401 aaPredicted RBP13.64□□□□□ -0.23
SSR4-206ENST00000460616 NSA2O95478 260 aaKnown RBP13.64□□□□□ -0.23
SSR4-206ENST00000460616 HEXBP07686 556 aa13.64□□□□□ -0.23
SSR4-206ENST00000460616 OR3A4PP47883 348 aa13.64□□□□□ -0.23
SSR4-206ENST00000460616 AFF3P51826 1226 aaKnown RBP13.64□□□□□ -0.23
SSR4-206ENST00000460616 NKX6-1P78426 367 aaPredicted RBP13.64□□□□□ -0.23
SSR4-206ENST00000460616 FMODQ06828 376 aa13.64□□□□□ -0.23
SSR4-206ENST00000460616 CHRFAM7AQ494W8 412 aa13.64□□□□□ -0.23
SSR4-206ENST00000460616 HSD17B11Q8NBQ5 300 aa13.64□□□□□ -0.23
SSR4-206ENST00000460616 FAM213BQ8TBF2 198 aa13.64□□□□□ -0.23
SSR4-206ENST00000460616 RNF133Q8WVZ7 376 aa13.64□□□□□ -0.23
SSR4-206ENST00000460616 RAB39BQ96DA2 213 aa13.64□□□□□ -0.23
SSR4-206ENST00000460616 C1orf147Q96MC9 270 aaPredicted RBP13.64□□□□□ -0.23
SSR4-206ENST00000460616 ABCA7Q8IZY2 2146 aa13.64□□□□□ -0.23
SSR4-206ENST00000460616 CEP192Q8TEP8 1941 aa13.64□□□□□ -0.23
SSR4-206ENST00000460616 ELOA3CA0A087WX78 387 aaPredicted RBP13.64□□□□□ -0.23
SSR4-206ENST00000460616 RPL36A-HNRNPH2H7BZ11 118 aa13.64□□□□□ -0.23
SSR4-206ENST00000460616 CLPSP04118 112 aa13.64□□□□□ -0.23
SSR4-206ENST00000460616 HLA-DOBP13765 273 aa13.64□□□□□ -0.23
SSR4-206ENST00000460616 UBE2KP61086 200 aa13.64□□□□□ -0.23
SSR4-206ENST00000460616 PPP1CAP62136 330 aa13.64□□□□□ -0.23
SSR4-206ENST00000460616 SPEM1Q8N4L4 309 aa13.64□□□□□ -0.23
SSR4-206ENST00000460616 PATE1Q8WXA2 126 aa13.64□□□□□ -0.23
SSR4-206ENST00000460616 NXF5Q9H1B4 397 aaKnown RBP13.64□□□□□ -0.23
SSR4-206ENST00000460616 UNKLQ9H9P5 680 aaKnown RBP13.64□□□□□ -0.23
SSR4-206ENST00000460616 OR5H15A6NDH6 313 aa13.63□□□□□ -0.23
SSR4-206ENST00000460616 OR5H1A6NKK0 313 aa13.63□□□□□ -0.23
SSR4-206ENST00000460616 MBPP02686 304 aaPredicted RBP13.63□□□□□ -0.23
SSR4-206ENST00000460616 ATXN8OSP0DMR3 200 aa13.63□□□□□ -0.23
SSR4-206ENST00000460616 HIKESHIQ53FT3 197 aa13.63□□□□□ -0.23
SSR4-206ENST00000460616 PLXDC2Q6UX71 529 aa13.63□□□□□ -0.23
SSR4-206ENST00000460616 SULF2Q8IWU5 870 aa13.63□□□□□ -0.23
SSR4-206ENST00000460616 PRR22Q8IZ63 422 aa13.63□□□□□ -0.23
SSR4-206ENST00000460616 APCDD1LQ8NCL9 501 aa13.63□□□□□ -0.23
SSR4-206ENST00000460616 OIT3Q8WWZ8 545 aa13.63□□□□□ -0.23
SSR4-206ENST00000460616 URM1Q9BTM9 101 aaKnown RBP13.63□□□□□ -0.23
SSR4-206ENST00000460616 SDK1Q7Z5N4 2213 aa13.63□□□□□ -0.23
SSR4-206ENST00000460616 DMDP11532 3685 aa13.63□□□□□ -0.23
SSR4-206ENST00000460616 A0A087WWC5 75 aa13.63□□□□□ -0.23
SSR4-206ENST00000460616 ZNF724A8MTY0 619 aa13.63□□□□□ -0.23
SSR4-206ENST00000460616 H0Y8X5 98 aa13.63□□□□□ -0.23
SSR4-206ENST00000460616 CYB5BO43169 146 aa13.63□□□□□ -0.23
SSR4-206ENST00000460616 GPR137BO60478 399 aa13.63□□□□□ -0.23
SSR4-206ENST00000460616 IGHMP01871 453 aa13.63□□□□□ -0.23
SSR4-206ENST00000460616 TRGC2P03986 189 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms