RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 IGFBPL1Q8WX77 278 aa9.35□□□□□ -0.91
SMNDC1-203ENST00000460483 CCL17Q92583 94 aa9.35□□□□□ -0.91
SMNDC1-203ENST00000460483 SORCS2Q96PQ0 1159 aa9.35□□□□□ -0.91
SMNDC1-203ENST00000460483 MRI1Q9BV20 369 aa9.35□□□□□ -0.91
SMNDC1-203ENST00000460483 FAM192AQ9GZU8 254 aa9.35□□□□□ -0.91
SMNDC1-203ENST00000460483 RASL12Q9NYN1 266 aa9.35□□□□□ -0.91
SMNDC1-203ENST00000460483 RNF7Q9UBF6 113 aa9.35□□□□□ -0.91
SMNDC1-203ENST00000460483 SF3B6Q9Y3B4 125 aaKnown RBP9.35□□□□□ -0.91
SMNDC1-203ENST00000460483 LOC100506127A0A0U1RQW1 187 aa9.34□□□□□ -0.91
SMNDC1-203ENST00000460483 PQLC2LA1A4F0 135 aa9.34□□□□□ -0.91
SMNDC1-203ENST00000460483 A6NIN4 97 aa9.34□□□□□ -0.91
SMNDC1-203ENST00000460483 J3QT63 122 aa9.34□□□□□ -0.91
SMNDC1-203ENST00000460483 MLNRO43193 412 aa9.34□□□□□ -0.91
SMNDC1-203ENST00000460483 NDUFA2O43678 99 aa9.34□□□□□ -0.91
SMNDC1-203ENST00000460483 TFAP2AP05549 437 aa9.34□□□□□ -0.91
SMNDC1-203ENST00000460483 ACAA1P09110 424 aaPredicted RBP9.34□□□□□ -0.91
SMNDC1-203ENST00000460483 UBBP0CG47 229 aa9.34□□□□□ -0.91
SMNDC1-203ENST00000460483 SMIM18P0DKX4 95 aa9.34□□□□□ -0.91
SMNDC1-203ENST00000460483 CFHR2P36980 270 aa9.34□□□□□ -0.91
SMNDC1-203ENST00000460483 MAGEB1P43366 347 aa9.34□□□□□ -0.91
SMNDC1-203ENST00000460483 MTNR1BP49286 362 aa9.34□□□□□ -0.91
SMNDC1-203ENST00000460483 FABP5Q01469 135 aa9.34□□□□□ -0.91
SMNDC1-203ENST00000460483 IL24Q13007 206 aa9.34□□□□□ -0.91
SMNDC1-203ENST00000460483 RIN1Q13671 783 aa9.34□□□□□ -0.91
SMNDC1-203ENST00000460483 KISS1Q15726 138 aa9.34□□□□□ -0.91
SMNDC1-203ENST00000460483 UBE2V2Q15819 145 aa9.34□□□□□ -0.91
SMNDC1-203ENST00000460483 DDI2Q5TDH0 399 aa9.34□□□□□ -0.91
SMNDC1-203ENST00000460483 HIST2H2BCQ6DN03 193 aa9.34□□□□□ -0.91
SMNDC1-203ENST00000460483 SATL1Q86VE3 508 aa9.34□□□□□ -0.91
SMNDC1-203ENST00000460483 MUC20Q8N307 709 aaPredicted RBP9.34□□□□□ -0.91
SMNDC1-203ENST00000460483 RAB2BQ8WUD1 216 aa9.34□□□□□ -0.91
SMNDC1-203ENST00000460483 ITLN1Q8WWA0 313 aa9.34□□□□□ -0.91
SMNDC1-203ENST00000460483 RGP1Q92546 391 aaPredicted RBP9.34□□□□□ -0.91
SMNDC1-203ENST00000460483 PERPQ96FX8 193 aa9.34□□□□□ -0.91
SMNDC1-203ENST00000460483 FOXC2Q99958 501 aa9.34□□□□□ -0.91
SMNDC1-203ENST00000460483 CHCHD6Q9BRQ6 235 aa9.34□□□□□ -0.91
SMNDC1-203ENST00000460483 PIMREGQ9BSJ6 248 aa9.34□□□□□ -0.91
SMNDC1-203ENST00000460483 OR51I2Q9H344 312 aa9.34□□□□□ -0.91
SMNDC1-203ENST00000460483 GCM1Q9NP62 436 aa9.34□□□□□ -0.91
SMNDC1-203ENST00000460483 TAS2R4Q9NYW5 299 aa9.34□□□□□ -0.91
SMNDC1-203ENST00000460483 TRAV38-1A0A0B4J264 116 aa9.33□□□□□ -0.92
SMNDC1-203ENST00000460483 A0A1W2PPK0 400 aa9.33□□□□□ -0.92
SMNDC1-203ENST00000460483 TRAPPC2LH3BP13 241 aa9.33□□□□□ -0.92
SMNDC1-203ENST00000460483 SSX4O60224 188 aa9.33□□□□□ -0.92
SMNDC1-203ENST00000460483 LILRA1O75019 489 aa9.33□□□□□ -0.92
SMNDC1-203ENST00000460483 CSTBP04080 98 aaKnown RBP9.33□□□□□ -0.92
SMNDC1-203ENST00000460483 MAS1P04201 325 aa9.33□□□□□ -0.92
SMNDC1-203ENST00000460483 TMEM225BP0DP42 221 aa9.33□□□□□ -0.92
SMNDC1-203ENST00000460483 IGFBP3P17936 291 aaPredicted RBP9.33□□□□□ -0.92
SMNDC1-203ENST00000460483 THBS2P35442 1172 aa9.33□□□□□ -0.92
SMNDC1-203ENST00000460483 ALDH3B2P48448 385 aa9.33□□□□□ -0.92
SMNDC1-203ENST00000460483 TMBIM6P55061 237 aa9.33□□□□□ -0.92
SMNDC1-203ENST00000460483 ZNF154Q13106 437 aa9.33□□□□□ -0.92
SMNDC1-203ENST00000460483 MAB21L1Q13394 359 aa9.33□□□□□ -0.92
SMNDC1-203ENST00000460483 CARTPTQ16568 116 aa9.33□□□□□ -0.92
SMNDC1-203ENST00000460483 MICBQ29980 383 aa9.33□□□□□ -0.92
SMNDC1-203ENST00000460483 C22orf42Q6IC83 251 aa9.33□□□□□ -0.92
SMNDC1-203ENST00000460483 ZNF529Q6P280 563 aa9.33□□□□□ -0.92
SMNDC1-203ENST00000460483 HAGHLQ6PII5 290 aaPredicted RBP9.33□□□□□ -0.92
SMNDC1-203ENST00000460483 MOGAT3Q86VF5 341 aa9.33□□□□□ -0.92
SMNDC1-203ENST00000460483 FAM90A1Q86YD7 464 aa9.33□□□□□ -0.92
SMNDC1-203ENST00000460483 ANKRD13BQ86YJ7 626 aa9.33□□□□□ -0.92
SMNDC1-203ENST00000460483 ZCCHC24Q8N2G6 241 aaKnown RBP9.33□□□□□ -0.92
SMNDC1-203ENST00000460483 JAGN1Q8N5M9 183 aa9.33□□□□□ -0.92
SMNDC1-203ENST00000460483 OR13C5Q8NGS8 318 aa9.33□□□□□ -0.92
SMNDC1-203ENST00000460483 ZNF420Q8TAQ5 688 aaPredicted RBP9.33□□□□□ -0.92
SMNDC1-203ENST00000460483 TRMT10AQ8TBZ6 339 aaKnown RBP9.33□□□□□ -0.92
SMNDC1-203ENST00000460483 FAM168AQ92567 244 aa9.33□□□□□ -0.92
SMNDC1-203ENST00000460483 C12orf43Q96C57 262 aaKnown RBP9.33□□□□□ -0.92
SMNDC1-203ENST00000460483 SOX7Q9BT81 388 aa9.33□□□□□ -0.92
SMNDC1-203ENST00000460483 TLNRD1Q9H1K6 362 aa9.33□□□□□ -0.92
SMNDC1-203ENST00000460483 METTL17Q9H7H0 456 aaPredicted RBP9.33□□□□□ -0.92
SMNDC1-203ENST00000460483 PLGRKTQ9HBL7 147 aa9.33□□□□□ -0.92
SMNDC1-203ENST00000460483 TMEM106BQ9NUM4 274 aa9.33□□□□□ -0.92
SMNDC1-203ENST00000460483 C1orf123Q9NWV4 160 aa9.33□□□□□ -0.92
SMNDC1-203ENST00000460483 TXNL4BQ9NX01 149 aaKnown RBP9.33□□□□□ -0.92
SMNDC1-203ENST00000460483 SPTAN1Q13813 2472 aaKnown RBP9.33□□□□□ -0.92
SMNDC1-203ENST00000460483 PPIAL4EA0A075B759 164 aa9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 SMIM31A0A1B0GVY4 71 aa9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 PPIAL4DF5H284 164 aa9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 H0YL77 283 aa9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 CDIPTO14735 213 aa9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 SLC22A1O15245 554 aa9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 CDC14BO60729 498 aa9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 NOS1APO75052 506 aaPredicted RBP9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 KDM4BO94953 1096 aa9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 BPNT1O95861 308 aa9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 PPIAL4FP0DN26 164 aa9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 MUC1P15941 1255 aaPredicted RBP9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 SLC25A16P16260 332 aa9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 RAB3BP20337 219 aa9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 GADD45AP24522 165 aa9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 GPR6P46095 362 aaPredicted RBP9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 KRTAP10-9P60411 292 aa9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 PDZK1IP1Q13113 114 aa9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 RSU1Q15404 277 aa9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 SMIM21Q3B7S5 101 aa9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 TMEM91Q6ZNR0 172 aa9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 SPICQ8N5J4 248 aa9.32□□□□□ -0.92
SMNDC1-203ENST00000460483 SCCPDHQ8NBX0 429 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms