RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 POC1AQ8NBT0 407 aa8.99□□□□□ -0.97
UBR4-208ENST00000459947 GPR173Q9NS66 373 aa8.99□□□□□ -0.97
UBR4-208ENST00000459947 DNAJB11Q9UBS4 358 aa8.99□□□□□ -0.97
UBR4-208ENST00000459947 CDC42EP3Q9UKI2 254 aa8.99□□□□□ -0.97
UBR4-208ENST00000459947 RELNP78509 3460 aa8.99□□□□□ -0.97
UBR4-208ENST00000459947 MAGEB4O15481 346 aaPredicted RBP8.99□□□□□ -0.97
UBR4-208ENST00000459947 LHBP01229 141 aa8.99□□□□□ -0.97
UBR4-208ENST00000459947 ZMYND11Q15326 602 aa8.99□□□□□ -0.97
UBR4-208ENST00000459947 WDR82Q6UXN9 313 aa8.99□□□□□ -0.97
UBR4-208ENST00000459947 TMIGD2Q96BF3 282 aa8.99□□□□□ -0.97
UBR4-208ENST00000459947 XPNPEP2O43895 674 aa8.99□□□□□ -0.97
UBR4-208ENST00000459947 ZNF16P17020 682 aaPredicted RBP8.99□□□□□ -0.97
UBR4-208ENST00000459947 ATPAF1Q5TC12 328 aaPredicted RBP8.99□□□□□ -0.97
UBR4-208ENST00000459947 DMKNQ6E0U4 476 aaPredicted RBP8.99□□□□□ -0.97
UBR4-208ENST00000459947 SCCPDHQ8NBX0 429 aa8.99□□□□□ -0.97
UBR4-208ENST00000459947 CNBD2Q96M20 576 aa8.99□□□□□ -0.97
UBR4-208ENST00000459947 OPALINQ96PE5 141 aa8.99□□□□□ -0.97
UBR4-208ENST00000459947 TMEM165Q9HC07 324 aa8.99□□□□□ -0.97
UBR4-208ENST00000459947 A0A0G2JMP0 313 aa8.98□□□□□ -0.97
UBR4-208ENST00000459947 A0A0X1KG70 313 aa8.98□□□□□ -0.97
UBR4-208ENST00000459947 MEGF11A6BM72 1044 aa8.98□□□□□ -0.97
UBR4-208ENST00000459947 CYB5R3P00387 301 aaPredicted RBP8.98□□□□□ -0.97
UBR4-208ENST00000459947 ALDOBP05062 364 aa8.98□□□□□ -0.97
UBR4-208ENST00000459947 RAB3AP20336 220 aa8.98□□□□□ -0.97
UBR4-208ENST00000459947 GPM6AP51674 278 aa8.98□□□□□ -0.97
UBR4-208ENST00000459947 PRSS12P56730 875 aa8.98□□□□□ -0.97
UBR4-208ENST00000459947 NANOS3P60323 173 aaKnown RBP8.98□□□□□ -0.97
UBR4-208ENST00000459947 ZNF367Q7RTV3 350 aa8.98□□□□□ -0.97
UBR4-208ENST00000459947 OR4M2Q8NGB6 313 aa8.98□□□□□ -0.97
UBR4-208ENST00000459947 ZNF420Q8TAQ5 688 aaPredicted RBP8.98□□□□□ -0.97
UBR4-208ENST00000459947 TMEM186Q96B77 213 aa8.98□□□□□ -0.97
UBR4-208ENST00000459947 TREM2Q9NZC2 230 aa8.98□□□□□ -0.97
UBR4-208ENST00000459947 CACNG2Q9Y698 323 aa8.98□□□□□ -0.97
UBR4-208ENST00000459947 PDZD2O15018 2839 aa8.98□□□□□ -0.97
UBR4-208ENST00000459947 CEACAM18A8MTB9 384 aa8.98□□□□□ -0.97
UBR4-208ENST00000459947 H3BUI4 141 aa8.98□□□□□ -0.97
UBR4-208ENST00000459947 PLPP2O43688 288 aa8.98□□□□□ -0.97
UBR4-208ENST00000459947 GPX5O75715 221 aa8.98□□□□□ -0.97
UBR4-208ENST00000459947 LIPFP07098 398 aa8.98□□□□□ -0.97
UBR4-208ENST00000459947 PMELP40967 661 aa8.98□□□□□ -0.97
UBR4-208ENST00000459947 PITPNBP48739 271 aa8.98□□□□□ -0.97
UBR4-208ENST00000459947 IRF3Q14653 427 aa8.98□□□□□ -0.97
UBR4-208ENST00000459947 TBCEQ15813 527 aaPredicted RBP8.98□□□□□ -0.97
UBR4-208ENST00000459947 Q499Y3 187 aa8.98□□□□□ -0.97
UBR4-208ENST00000459947 CIARTQ8N365 385 aaPredicted RBP8.98□□□□□ -0.97
UBR4-208ENST00000459947 AQP3Q92482 292 aa8.98□□□□□ -0.97
UBR4-208ENST00000459947 UFD1Q92890 307 aa8.98□□□□□ -0.97
UBR4-208ENST00000459947 ISG20L2Q9H9L3 353 aaKnown RBP8.98□□□□□ -0.97
UBR4-208ENST00000459947 UTP20O75691 2785 aaKnown RBP8.98□□□□□ -0.97
UBR4-208ENST00000459947 RTTNQ86VV8 2226 aa8.98□□□□□ -0.97
UBR4-208ENST00000459947 GLRA1P23415 457 aa8.98□□□□□ -0.97
UBR4-208ENST00000459947 CRHBPP24387 322 aa8.98□□□□□ -0.97
UBR4-208ENST00000459947 GNB2P62879 340 aa8.98□□□□□ -0.97
UBR4-208ENST00000459947 BTNL3Q6UXE8 466 aa8.98□□□□□ -0.97
UBR4-208ENST00000459947 PPP1R35Q8TAP8 253 aa8.98□□□□□ -0.97
UBR4-208ENST00000459947 FGGYQ96C11 551 aa8.98□□□□□ -0.97
UBR4-208ENST00000459947 TMEM246Q9BRR3 403 aa8.98□□□□□ -0.97
UBR4-208ENST00000459947 MYO9AB2RTY4 2548 aa8.97□□□□□ -0.97
UBR4-208ENST00000459947 SULT1B1O43704 296 aa8.97□□□□□ -0.97
UBR4-208ENST00000459947 INMTO95050 263 aa8.97□□□□□ -0.97
UBR4-208ENST00000459947 ZFPL1O95159 310 aa8.97□□□□□ -0.97
UBR4-208ENST00000459947 TGFAP01135 160 aa8.97□□□□□ -0.97
UBR4-208ENST00000459947 FSTP19883 344 aa8.97□□□□□ -0.97
UBR4-208ENST00000459947 AZGP1P25311 298 aaKnown RBP8.97□□□□□ -0.97
UBR4-208ENST00000459947 SPHARQ15513 63 aa8.97□□□□□ -0.97
UBR4-208ENST00000459947 LAIR2Q6ISS4 152 aa8.97□□□□□ -0.97
UBR4-208ENST00000459947 GCSAMQ8N6F7 178 aa8.97□□□□□ -0.97
UBR4-208ENST00000459947 PNLDC1Q8NA58 520 aaKnown RBP8.97□□□□□ -0.97
UBR4-208ENST00000459947 SSBP3Q9BWW4 388 aaPredicted RBP8.97□□□□□ -0.97
UBR4-208ENST00000459947 PAK1IP1Q9NWT1 392 aaPredicted RBP8.97□□□□□ -0.97
UBR4-208ENST00000459947 UBAP1Q9NZ09 502 aa8.97□□□□□ -0.97
UBR4-208ENST00000459947 NLKQ9UBE8 527 aa8.97□□□□□ -0.97
UBR4-208ENST00000459947 ITPR2Q14571 2701 aa8.97□□□□□ -0.97
UBR4-208ENST00000459947 CR1P17927 2039 aa8.97□□□□□ -0.97
UBR4-208ENST00000459947 TRBV5-5A0A0J9YX44 114 aa8.97□□□□□ -0.97
UBR4-208ENST00000459947 ENSAO43768 121 aaKnown RBP8.97□□□□□ -0.97
UBR4-208ENST00000459947 WNT2P09544 360 aa8.97□□□□□ -0.97
UBR4-208ENST00000459947 EEF1B2P24534 225 aaKnown RBP8.97□□□□□ -0.97
UBR4-208ENST00000459947 THBS2P35442 1172 aa8.97□□□□□ -0.97
UBR4-208ENST00000459947 MPPED2Q15777 294 aa8.97□□□□□ -0.97
UBR4-208ENST00000459947 LRRC10Q5BKY1 277 aa8.97□□□□□ -0.97
UBR4-208ENST00000459947 HAGHLQ6PII5 290 aaPredicted RBP8.97□□□□□ -0.97
UBR4-208ENST00000459947 RNF166Q96A37 237 aaPredicted RBP8.97□□□□□ -0.97
UBR4-208ENST00000459947 MSI2Q96DH6 328 aaKnown RBP8.97□□□□□ -0.97
UBR4-208ENST00000459947 SHARPINQ9H0F6 387 aa8.97□□□□□ -0.97
UBR4-208ENST00000459947 CLN8Q9UBY8 286 aa8.97□□□□□ -0.97
UBR4-208ENST00000459947 FOXJ3Q9UPW0 622 aa8.97□□□□□ -0.97
UBR4-208ENST00000459947 PTGES3LE9PB15 166 aa8.97□□□□□ -0.97
UBR4-208ENST00000459947 CDIPTO14735 213 aa8.97□□□□□ -0.97
UBR4-208ENST00000459947 NDUFB3O43676 98 aa8.97□□□□□ -0.97
UBR4-208ENST00000459947 KNG1P01042 644 aa8.97□□□□□ -0.97
UBR4-208ENST00000459947 PGA5P0DJD9 388 aa8.97□□□□□ -0.97
UBR4-208ENST00000459947 PPIAL4GP0DN37 164 aa8.97□□□□□ -0.97
UBR4-208ENST00000459947 CD80P33681 288 aa8.97□□□□□ -0.97
UBR4-208ENST00000459947 MLLT11Q13015 90 aaPredicted RBP8.97□□□□□ -0.97
UBR4-208ENST00000459947 OR2G6Q5TZ20 316 aa8.97□□□□□ -0.97
UBR4-208ENST00000459947 C11orf53Q8IXP5 236 aa8.97□□□□□ -0.97
UBR4-208ENST00000459947 ZNF485Q8NCK3 441 aa8.97□□□□□ -0.97
UBR4-208ENST00000459947 PPP1R14AQ96A00 147 aa8.97□□□□□ -0.97
UBR4-208ENST00000459947 MRI1Q9BV20 369 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms