RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 FAM89BQ8N5H3 189 aa12.38□□□□□ -0.43
SCFD1-203ENST00000458591 JSRP1Q96MG2 331 aaPredicted RBP12.38□□□□□ -0.43
SCFD1-203ENST00000458591 ZNF2Q9BSG1 426 aaPredicted RBP12.38□□□□□ -0.43
SCFD1-203ENST00000458591 RBM24Q9BX46 236 aaKnown RBP12.38□□□□□ -0.43
SCFD1-203ENST00000458591 RHOFQ9HBH0 211 aa12.38□□□□□ -0.43
SCFD1-203ENST00000458591 COA4Q9NYJ1 87 aa12.38□□□□□ -0.43
SCFD1-203ENST00000458591 CEACAM18A8MTB9 384 aa12.38□□□□□ -0.43
SCFD1-203ENST00000458591 MED6O75586 246 aa12.38□□□□□ -0.43
SCFD1-203ENST00000458591 IFNA4P05014 189 aa12.38□□□□□ -0.43
SCFD1-203ENST00000458591 HEXAP06865 529 aa12.38□□□□□ -0.43
SCFD1-203ENST00000458591 PATE4P0C8F1 98 aa12.38□□□□□ -0.43
SCFD1-203ENST00000458591 ZNF708P17019 499 aa12.38□□□□□ -0.43
SCFD1-203ENST00000458591 EIF5AL1Q6IS14 154 aaKnown RBP12.38□□□□□ -0.43
SCFD1-203ENST00000458591 RABEPKQ7Z6M1 372 aa12.38□□□□□ -0.43
SCFD1-203ENST00000458591 GLYATL2Q8WU03 294 aa12.38□□□□□ -0.43
SCFD1-203ENST00000458591 MRPL24Q96A35 216 aaKnown RBP12.38□□□□□ -0.43
SCFD1-203ENST00000458591 SCGB3A2Q96PL1 93 aa12.38□□□□□ -0.43
SCFD1-203ENST00000458591 CMSS1Q9BQ75 279 aaKnown RBP12.38□□□□□ -0.43
SCFD1-203ENST00000458591 FAAP24Q9BTP7 215 aa12.38□□□□□ -0.43
SCFD1-203ENST00000458591 DEFB126Q9BYW3 111 aa12.38□□□□□ -0.43
SCFD1-203ENST00000458591 ESRP2Q9H6T0 727 aaKnown RBP12.38□□□□□ -0.43
SCFD1-203ENST00000458591 OCIAD1Q9NX40 245 aa12.38□□□□□ -0.43
SCFD1-203ENST00000458591 MED19A0JLT2 244 aaPredicted RBP12.37□□□□□ -0.43
SCFD1-203ENST00000458591 AQP7P3A6NL99 342 aa12.37□□□□□ -0.43
SCFD1-203ENST00000458591 SCGB1D2O95969 90 aa12.37□□□□□ -0.43
SCFD1-203ENST00000458591 APOC1P02654 83 aa12.37□□□□□ -0.43
SCFD1-203ENST00000458591 LYL1P12980 280 aa12.37□□□□□ -0.43
SCFD1-203ENST00000458591 OPRM1P35372 400 aa12.37□□□□□ -0.43
SCFD1-203ENST00000458591 PDZK1IP1Q13113 114 aa12.37□□□□□ -0.43
SCFD1-203ENST00000458591 IAH1Q2TAA2 248 aaPredicted RBP12.37□□□□□ -0.43
SCFD1-203ENST00000458591 TSPO2Q5TGU0 170 aa12.37□□□□□ -0.43
SCFD1-203ENST00000458591 SEMA6DQ8NFY4 1073 aa12.37□□□□□ -0.43
SCFD1-203ENST00000458591 OR5L2Q8NGL0 311 aa12.37□□□□□ -0.43
SCFD1-203ENST00000458591 ADAMTS17Q8TE56 1095 aa12.37□□□□□ -0.43
SCFD1-203ENST00000458591 SAT2Q96F10 170 aaPredicted RBP12.37□□□□□ -0.43
SCFD1-203ENST00000458591 SHDQ96IW2 340 aa12.37□□□□□ -0.43
SCFD1-203ENST00000458591 AQP10Q96PS8 301 aa12.37□□□□□ -0.43
SCFD1-203ENST00000458591 USB1Q9BQ65 265 aaKnown RBP12.37□□□□□ -0.43
SCFD1-203ENST00000458591 PIGQQ9BRB3 760 aa12.37□□□□□ -0.43
SCFD1-203ENST00000458591 LSM5Q9Y4Y9 91 aaKnown RBP12.37□□□□□ -0.43
SCFD1-203ENST00000458591 B3GALT1Q9Y5Z6 326 aa12.37□□□□□ -0.43
SCFD1-203ENST00000458591 ADAMTS20P59510 1910 aa12.37□□□□□ -0.43
SCFD1-203ENST00000458591 NAT2P11245 290 aa12.37□□□□□ -0.43
SCFD1-203ENST00000458591 MEOX2P50222 304 aa12.37□□□□□ -0.43
SCFD1-203ENST00000458591 NOVA1P51513 510 aaKnown RBP12.37□□□□□ -0.43
SCFD1-203ENST00000458591 TAF9Q16594 264 aa12.37□□□□□ -0.43
SCFD1-203ENST00000458591 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.37□□□□□ -0.43
SCFD1-203ENST00000458591 C5orf24Q7Z6I8 188 aa12.37□□□□□ -0.43
SCFD1-203ENST00000458591 SPACA9Q96E40 222 aaPredicted RBP12.37□□□□□ -0.43
SCFD1-203ENST00000458591 NRIP2Q9BQI9 281 aa12.37□□□□□ -0.43
SCFD1-203ENST00000458591 TAF9BQ9HBM6 251 aa12.37□□□□□ -0.43
SCFD1-203ENST00000458591 CHCHD2Q9Y6H1 151 aaPredicted RBP12.37□□□□□ -0.43
SCFD1-203ENST00000458591 CD63P08962 238 aa12.36□□□□□ -0.43
SCFD1-203ENST00000458591 SPP1P10451 314 aa12.36□□□□□ -0.43
SCFD1-203ENST00000458591 PRF1P14222 555 aa12.36□□□□□ -0.43
SCFD1-203ENST00000458591 ACKR3P25106 362 aa12.36□□□□□ -0.43
SCFD1-203ENST00000458591 MSX1P28360 303 aa12.36□□□□□ -0.43
SCFD1-203ENST00000458591 KCNJ3P48549 501 aa12.36□□□□□ -0.43
SCFD1-203ENST00000458591 AFF3P51826 1226 aaKnown RBP12.36□□□□□ -0.43
SCFD1-203ENST00000458591 ECH1Q13011 328 aa12.36□□□□□ -0.43
SCFD1-203ENST00000458591 ZNF385CQ66K41 422 aaPredicted RBP12.36□□□□□ -0.43
SCFD1-203ENST00000458591 KMT5CQ86Y97 462 aa12.36□□□□□ -0.43
SCFD1-203ENST00000458591 CARFQ8N187 725 aa12.36□□□□□ -0.43
SCFD1-203ENST00000458591 LILRB1Q8NHL6 650 aaPredicted RBP12.36□□□□□ -0.43
SCFD1-203ENST00000458591 ERGIC1Q969X5 290 aa12.36□□□□□ -0.43
SCFD1-203ENST00000458591 NABP1Q96AH0 204 aa12.36□□□□□ -0.43
SCFD1-203ENST00000458591 PISDQ9UG56 409 aa12.36□□□□□ -0.43
SCFD1-203ENST00000458591 ADAMTS9Q9P2N4 1935 aa12.36□□□□□ -0.43
SCFD1-203ENST00000458591 IGHV5-10-1A0A0J9YXX1 117 aa12.36□□□□□ -0.43
SCFD1-203ENST00000458591 FAM230AA0A1W2PPH8 454 aa12.36□□□□□ -0.43
SCFD1-203ENST00000458591 DKK1O94907 266 aa12.36□□□□□ -0.43
SCFD1-203ENST00000458591 CD80P33681 288 aa12.36□□□□□ -0.43
SCFD1-203ENST00000458591 CSNK1A1P48729 337 aa12.36□□□□□ -0.43
SCFD1-203ENST00000458591 CAV2P51636 162 aa12.36□□□□□ -0.43
SCFD1-203ENST00000458591 HGFACQ04756 655 aa12.36□□□□□ -0.43
SCFD1-203ENST00000458591 RXFP4Q8TDU9 374 aa12.36□□□□□ -0.43
SCFD1-203ENST00000458591 TOMM40LQ969M1 308 aa12.36□□□□□ -0.43
SCFD1-203ENST00000458591 FBXO17Q96EF6 278 aa12.36□□□□□ -0.43
SCFD1-203ENST00000458591 NECAB3Q96P71 396 aaPredicted RBP12.36□□□□□ -0.43
SCFD1-203ENST00000458591 PLEKHJ1Q9NW61 149 aa12.36□□□□□ -0.43
SCFD1-203ENST00000458591 RCC2Q9P258 522 aaKnown RBP12.36□□□□□ -0.43
SCFD1-203ENST00000458591 RARRES3Q9UL19 164 aa12.36□□□□□ -0.43
SCFD1-203ENST00000458591 WDFY4Q6ZS81 3184 aa12.36□□□□□ -0.43
SCFD1-203ENST00000458591 IGLV3-32A0A0A0MS00 114 aa12.35□□□□□ -0.43
SCFD1-203ENST00000458591 FIGNL2A6NMB9 653 aa12.35□□□□□ -0.43
SCFD1-203ENST00000458591 PRSS44E7EML9 344 aa12.35□□□□□ -0.43
SCFD1-203ENST00000458591 IGLV3-1P01715 115 aa12.35□□□□□ -0.43
SCFD1-203ENST00000458591 CRYBA1P05813 215 aa12.35□□□□□ -0.43
SCFD1-203ENST00000458591 SFTA3P0C7M3 94 aa12.35□□□□□ -0.43
SCFD1-203ENST00000458591 TMEM225BP0DP42 221 aa12.35□□□□□ -0.43
SCFD1-203ENST00000458591 CCL3P10147 92 aa12.35□□□□□ -0.43
SCFD1-203ENST00000458591 MSR1P21757 451 aa12.35□□□□□ -0.43
SCFD1-203ENST00000458591 NTF4P34130 210 aa12.35□□□□□ -0.43
SCFD1-203ENST00000458591 GRB2P62993 217 aaKnown RBP12.35□□□□□ -0.43
SCFD1-203ENST00000458591 FAM189A2Q15884 450 aa12.35□□□□□ -0.43
SCFD1-203ENST00000458591 KCNMB1Q16558 191 aa12.35□□□□□ -0.43
SCFD1-203ENST00000458591 SGK3Q96BR1 496 aa12.35□□□□□ -0.43
SCFD1-203ENST00000458591 MARS2Q96GW9 593 aaKnown RBP12.35□□□□□ -0.43
SCFD1-203ENST00000458591 REEP6Q96HR9 211 aa12.35□□□□□ -0.43
SCFD1-203ENST00000458591 DNAJB11Q9UBS4 358 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms