RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 C11orf91Q3C1V1 193 aa14.42□□□□□ -0.1
USP39-208ENST00000455732 TMEM244Q5VVB8 128 aa14.42□□□□□ -0.1
USP39-208ENST00000455732 DHRSXQ8N5I4 330 aa14.42□□□□□ -0.1
USP39-208ENST00000455732 OR52I1Q8NGK6 324 aa14.42□□□□□ -0.1
USP39-208ENST00000455732 NANPQ8TBE9 248 aa14.42□□□□□ -0.1
USP39-208ENST00000455732 RAB40AQ8WXH6 277 aa14.42□□□□□ -0.1
USP39-208ENST00000455732 PELI1Q96FA3 418 aa14.42□□□□□ -0.1
USP39-208ENST00000455732 C4orf36Q96KX1 117 aa14.42□□□□□ -0.1
USP39-208ENST00000455732 ADI1Q9BV57 179 aa14.42□□□□□ -0.1
USP39-208ENST00000455732 C19orf24Q9BVV8 132 aa14.42□□□□□ -0.1
USP39-208ENST00000455732 DNTTIP1Q9H147 329 aa14.42□□□□□ -0.1
USP39-208ENST00000455732 PLEKHA1Q9HB21 404 aa14.42□□□□□ -0.1
USP39-208ENST00000455732 FGF20Q9NP95 211 aaPredicted RBP14.42□□□□□ -0.1
USP39-208ENST00000455732 ERVK13-1Q9NX77 482 aa14.42□□□□□ -0.1
USP39-208ENST00000455732 FRRS1LQ9P0K9 344 aa14.42□□□□□ -0.1
USP39-208ENST00000455732 HSPE1-MOB4S4R3N1 261 aa14.42□□□□□ -0.1
USP39-208ENST00000455732 IGHV3OR15-7A0A075B7D8 119 aa14.41□□□□□ -0.1
USP39-208ENST00000455732 A0A0A6YYJ9 748 aa14.41□□□□□ -0.1
USP39-208ENST00000455732 PQLC2LA1A4F0 135 aa14.41□□□□□ -0.1
USP39-208ENST00000455732 ANKRD61A6NGH8 418 aa14.41□□□□□ -0.1
USP39-208ENST00000455732 H0YAE9 185 aa14.41□□□□□ -0.1
USP39-208ENST00000455732 J3QLW9 94 aa14.41□□□□□ -0.1
USP39-208ENST00000455732 HTR1AP08908 422 aa14.41□□□□□ -0.1
USP39-208ENST00000455732 ZNF19P17023 458 aa14.41□□□□□ -0.1
USP39-208ENST00000455732 EPHA1P21709 976 aa14.41□□□□□ -0.1
USP39-208ENST00000455732 CAPGP40121 348 aa14.41□□□□□ -0.1
USP39-208ENST00000455732 NANOS3P60323 173 aaKnown RBP14.41□□□□□ -0.1
USP39-208ENST00000455732 SMN1Q16637 294 aaKnown RBP14.41□□□□□ -0.1
USP39-208ENST00000455732 ATPAF1Q5TC12 328 aaPredicted RBP14.41□□□□□ -0.1
USP39-208ENST00000455732 STUMQ69YW2 141 aa14.41□□□□□ -0.1
USP39-208ENST00000455732 BTNL3Q6UXE8 466 aa14.41□□□□□ -0.1
USP39-208ENST00000455732 LHFPL3Q86UP9 236 aa14.41□□□□□ -0.1
USP39-208ENST00000455732 ZNF573Q86YE8 665 aa14.41□□□□□ -0.1
USP39-208ENST00000455732 HAVCR2Q8TDQ0 301 aa14.41□□□□□ -0.1
USP39-208ENST00000455732 AQP3Q92482 292 aa14.41□□□□□ -0.1
USP39-208ENST00000455732 TECTBQ96PL2 329 aa14.41□□□□□ -0.1
USP39-208ENST00000455732 MRI1Q9BV20 369 aa14.41□□□□□ -0.1
USP39-208ENST00000455732 CHST5Q9GZS9 411 aa14.41□□□□□ -0.1
USP39-208ENST00000455732 VCXQ9H320 206 aa14.41□□□□□ -0.1
USP39-208ENST00000455732 OCEL1Q9H607 264 aa14.41□□□□□ -0.1
USP39-208ENST00000455732 GPR173Q9NS66 373 aa14.41□□□□□ -0.1
USP39-208ENST00000455732 AUP1Q9Y679 476 aa14.41□□□□□ -0.1
USP39-208ENST00000455732 KIR2DS1A0A191URI9 304 aa14.4□□□□□ -0.1
USP39-208ENST00000455732 IRGMA1A4Y4 181 aa14.4□□□□□ -0.1
USP39-208ENST00000455732 C22orf46C9J442 243 aa14.4□□□□□ -0.1
USP39-208ENST00000455732 J3QT63 122 aa14.4□□□□□ -0.1
USP39-208ENST00000455732 RHBDL1O75783 438 aa14.4□□□□□ -0.1
USP39-208ENST00000455732 VENTXO95231 258 aa14.4□□□□□ -0.1
USP39-208ENST00000455732 CD276Q5ZPR3 534 aa14.4□□□□□ -0.1
USP39-208ENST00000455732 HAGHLQ6PII5 290 aaPredicted RBP14.4□□□□□ -0.1
USP39-208ENST00000455732 ZNF671Q8TAW3 534 aa14.4□□□□□ -0.1
USP39-208ENST00000455732 CNIH3Q8TBE1 160 aa14.4□□□□□ -0.1
USP39-208ENST00000455732 WDR13Q9H1Z4 485 aa14.4□□□□□ -0.1
USP39-208ENST00000455732 SMURF1Q9HCE7 757 aa14.4□□□□□ -0.1
USP39-208ENST00000455732 OR4C45A6NMZ5 311 aa14.39□□□□□ -0.11
USP39-208ENST00000455732 TMPRSS2O15393 492 aa14.39□□□□□ -0.11
USP39-208ENST00000455732 AKR7A2O43488 359 aa14.39□□□□□ -0.11
USP39-208ENST00000455732 ENSAO43768 121 aaKnown RBP14.39□□□□□ -0.11
USP39-208ENST00000455732 GATBO75879 557 aaKnown RBP14.39□□□□□ -0.11
USP39-208ENST00000455732 RPSAP08865 295 aaKnown RBP14.39□□□□□ -0.11
USP39-208ENST00000455732 MPZP25189 248 aa14.39□□□□□ -0.11
USP39-208ENST00000455732 DCKP27707 260 aa14.39□□□□□ -0.11
USP39-208ENST00000455732 SLC34A1Q06495 639 aa14.39□□□□□ -0.11
USP39-208ENST00000455732 ALKBH1Q13686 389 aaKnown RBP14.39□□□□□ -0.11
USP39-208ENST00000455732 DMRTC1Q5HYR2 192 aa14.39□□□□□ -0.11
USP39-208ENST00000455732 SLC36A1Q7Z2H8 476 aa14.39□□□□□ -0.11
USP39-208ENST00000455732 RDH10Q8IZV5 341 aa14.39□□□□□ -0.11
USP39-208ENST00000455732 POC1AQ8NBT0 407 aa14.39□□□□□ -0.11
USP39-208ENST00000455732 PP6455Q8WZ26 134 aa14.39□□□□□ -0.11
USP39-208ENST00000455732 SEH1LQ96EE3 360 aa14.39□□□□□ -0.11
USP39-208ENST00000455732 NUDT16L1Q9BRJ7 211 aaKnown RBP14.39□□□□□ -0.11
USP39-208ENST00000455732 ISG20L2Q9H9L3 353 aaKnown RBP14.39□□□□□ -0.11
USP39-208ENST00000455732 DNAJB11Q9UBS4 358 aa14.39□□□□□ -0.11
USP39-208ENST00000455732 NKX1-2Q9UD57 310 aaPredicted RBP14.39□□□□□ -0.11
USP39-208ENST00000455732 A6NIN4 97 aa14.38□□□□□ -0.11
USP39-208ENST00000455732 DVL1O14640 695 aa14.38□□□□□ -0.11
USP39-208ENST00000455732 NOS1APO75052 506 aaPredicted RBP14.38□□□□□ -0.11
USP39-208ENST00000455732 FCN3O75636 299 aa14.38□□□□□ -0.11
USP39-208ENST00000455732 ECDO95905 644 aaPredicted RBP14.38□□□□□ -0.11
USP39-208ENST00000455732 LIMS3P0CW19 117 aa14.38□□□□□ -0.11
USP39-208ENST00000455732 LIMS4P0CW20 117 aa14.38□□□□□ -0.11
USP39-208ENST00000455732 AMY2BP19961 511 aa14.38□□□□□ -0.11
USP39-208ENST00000455732 GLRA1P23415 457 aa14.38□□□□□ -0.11
USP39-208ENST00000455732 HAAOP46952 286 aa14.38□□□□□ -0.11
USP39-208ENST00000455732 TGM4P49221 684 aa14.38□□□□□ -0.11
USP39-208ENST00000455732 UBE2V2Q15819 145 aa14.38□□□□□ -0.11
USP39-208ENST00000455732 USP43Q70EL4 1123 aa14.38□□□□□ -0.11
USP39-208ENST00000455732 UTS2BQ765I0 119 aa14.38□□□□□ -0.11
USP39-208ENST00000455732 ANGPTL6Q8NI99 470 aa14.38□□□□□ -0.11
USP39-208ENST00000455732 FBLIM1Q8WUP2 373 aa14.38□□□□□ -0.11
USP39-208ENST00000455732 CCL13Q99616 98 aa14.38□□□□□ -0.11
USP39-208ENST00000455732 PKIBQ9C010 78 aa14.38□□□□□ -0.11
USP39-208ENST00000455732 RASL12Q9NYN1 266 aa14.38□□□□□ -0.11
USP39-208ENST00000455732 NLKQ9UBE8 527 aa14.38□□□□□ -0.11
USP39-208ENST00000455732 HHLA2Q9UM44 414 aa14.38□□□□□ -0.11
USP39-208ENST00000455732 SLC7A11Q9UPY5 501 aa14.38□□□□□ -0.11
USP39-208ENST00000455732 POLDIP2Q9Y2S7 368 aa14.38□□□□□ -0.11
USP39-208ENST00000455732 TENM1Q9UKZ4 2725 aa14.38□□□□□ -0.11
USP39-208ENST00000455732 ERICH4A6NGS2 130 aa14.37□□□□□ -0.11
USP39-208ENST00000455732 NKX6-3A6NJ46 265 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms