RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 MDFIC2A0A1B0GVS7 189 aa17.53■□□□□ 0.4
HMGB3-205ENST00000455596 CLDN34H7C241 214 aa17.53■□□□□ 0.4
HMGB3-205ENST00000455596 EI24O14681 340 aa17.53■□□□□ 0.4
HMGB3-205ENST00000455596 APOL3O95236 402 aa17.53■□□□□ 0.4
HMGB3-205ENST00000455596 ALPLP05186 524 aa17.53■□□□□ 0.4
HMGB3-205ENST00000455596 RNASE1P07998 156 aaKnown RBP17.53■□□□□ 0.4
HMGB3-205ENST00000455596 HKR1P10072 659 aa17.53■□□□□ 0.4
HMGB3-205ENST00000455596 SLC9A3R2Q15599 337 aa17.53■□□□□ 0.4
HMGB3-205ENST00000455596 DEFB112Q30KQ8 113 aa17.53■□□□□ 0.4
HMGB3-205ENST00000455596 CLVS2Q5SYC1 327 aa17.53■□□□□ 0.4
HMGB3-205ENST00000455596 RUSC1-AS1Q66K80 236 aa17.53■□□□□ 0.4
HMGB3-205ENST00000455596 HAGHLQ6PII5 290 aaPredicted RBP17.53■□□□□ 0.4
HMGB3-205ENST00000455596 C10orf67Q8IYJ2 551 aa17.53■□□□□ 0.4
HMGB3-205ENST00000455596 LY6G5BQ8NDX9 201 aa17.53■□□□□ 0.4
HMGB3-205ENST00000455596 OR14K1Q8NGZ2 314 aa17.53■□□□□ 0.4
HMGB3-205ENST00000455596 ANGPTL6Q8NI99 470 aa17.53■□□□□ 0.4
HMGB3-205ENST00000455596 TRUB1Q8WWH5 349 aaKnown RBP17.53■□□□□ 0.4
HMGB3-205ENST00000455596 AQP3Q92482 292 aa17.53■□□□□ 0.4
HMGB3-205ENST00000455596 ZDHHC16Q969W1 377 aa17.53■□□□□ 0.4
HMGB3-205ENST00000455596 TMIGD2Q96BF3 282 aa17.53■□□□□ 0.4
HMGB3-205ENST00000455596 DMRTB1Q96MA1 342 aa17.53■□□□□ 0.4
HMGB3-205ENST00000455596 USE1Q9NZ43 259 aa17.53■□□□□ 0.4
HMGB3-205ENST00000455596 SLC22A13Q9Y226 551 aa17.53■□□□□ 0.4
HMGB3-205ENST00000455596 KPTNQ9Y664 436 aa17.53■□□□□ 0.4
HMGB3-205ENST00000455596 A0A1B0GTI1 187 aa17.52■□□□□ 0.4
HMGB3-205ENST00000455596 METTL15A6NJ78 407 aa17.52■□□□□ 0.4
HMGB3-205ENST00000455596 OR2AT4A6NND4 320 aa17.52■□□□□ 0.4
HMGB3-205ENST00000455596 DHRS7CA6NNS2 312 aa17.52■□□□□ 0.4
HMGB3-205ENST00000455596 DLGAP1O14490 977 aa17.52■□□□□ 0.4
HMGB3-205ENST00000455596 IL13RA1P78552 427 aa17.52■□□□□ 0.4
HMGB3-205ENST00000455596 FOXL1Q12952 345 aa17.52■□□□□ 0.4
HMGB3-205ENST00000455596 CDONQ4KMG0 1287 aa17.52■□□□□ 0.4
HMGB3-205ENST00000455596 AWAT1Q58HT5 328 aa17.52■□□□□ 0.4
HMGB3-205ENST00000455596 Q6ZSR3 168 aa17.52■□□□□ 0.4
HMGB3-205ENST00000455596 GATAD2BQ8WXI9 593 aa17.52■□□□□ 0.4
HMGB3-205ENST00000455596 LHX4Q969G2 390 aa17.52■□□□□ 0.4
HMGB3-205ENST00000455596 HRASLS5Q96KN8 279 aa17.52■□□□□ 0.4
HMGB3-205ENST00000455596 GAFA1Q96PS6 74 aa17.52■□□□□ 0.4
HMGB3-205ENST00000455596 DCTN5Q9BTE1 182 aa17.52■□□□□ 0.4
HMGB3-205ENST00000455596 PRDM13Q9H4Q3 707 aa17.52■□□□□ 0.4
HMGB3-205ENST00000455596 SULT1C4O75897 302 aa17.51■□□□□ 0.39
HMGB3-205ENST00000455596 SELLP14151 372 aa17.51■□□□□ 0.39
HMGB3-205ENST00000455596 GABRA2P47869 451 aa17.51■□□□□ 0.39
HMGB3-205ENST00000455596 ALDH3A2P51648 485 aa17.51■□□□□ 0.39
HMGB3-205ENST00000455596 TMEM42Q69YG0 159 aa17.51■□□□□ 0.39
HMGB3-205ENST00000455596 CATSPERDQ86XM0 798 aa17.51■□□□□ 0.39
HMGB3-205ENST00000455596 CMTM4Q8IZR5 234 aa17.51■□□□□ 0.39
HMGB3-205ENST00000455596 H1FXQ92522 213 aaKnown RBP17.51■□□□□ 0.39
HMGB3-205ENST00000455596 GPR173Q9NS66 373 aa17.51■□□□□ 0.39
HMGB3-205ENST00000455596 RASL12Q9NYN1 266 aa17.51■□□□□ 0.39
HMGB3-205ENST00000455596 ONECUT1Q9UBC0 465 aa17.51■□□□□ 0.39
HMGB3-205ENST00000455596 SLC25A10Q9UBX3 287 aaPredicted RBP17.51■□□□□ 0.39
HMGB3-205ENST00000455596 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.51■□□□□ 0.39
HMGB3-205ENST00000455596 FBN3Q75N90 2809 aa17.51■□□□□ 0.39
HMGB3-205ENST00000455596 IGHV1-69DA0A0B4J2H0 117 aa17.5■□□□□ 0.39
HMGB3-205ENST00000455596 A0A1B0GVI7 797 aa17.5■□□□□ 0.39
HMGB3-205ENST00000455596 EBAG9O00559 213 aa17.5■□□□□ 0.39
HMGB3-205ENST00000455596 SIGLEC5O15389 551 aa17.5■□□□□ 0.39
HMGB3-205ENST00000455596 HOXA3O43365 443 aaPredicted RBP17.5■□□□□ 0.39
HMGB3-205ENST00000455596 IGHV1-69P01742 117 aa17.5■□□□□ 0.39
HMGB3-205ENST00000455596 TFF1P04155 84 aa17.5■□□□□ 0.39
HMGB3-205ENST00000455596 ACAA1P09110 424 aaPredicted RBP17.5■□□□□ 0.39
HMGB3-205ENST00000455596 CCL1P22362 96 aa17.5■□□□□ 0.39
HMGB3-205ENST00000455596 HAAOP46952 286 aa17.5■□□□□ 0.39
HMGB3-205ENST00000455596 DGUOKQ16854 277 aa17.5■□□□□ 0.39
HMGB3-205ENST00000455596 ODF4Q2M2E3 257 aa17.5■□□□□ 0.39
HMGB3-205ENST00000455596 ZIK1Q3SY52 487 aaPredicted RBP17.5■□□□□ 0.39
HMGB3-205ENST00000455596 FAM220AQ7Z4H9 259 aa17.5■□□□□ 0.39
HMGB3-205ENST00000455596 VMO1Q7Z5L0 202 aa17.5■□□□□ 0.39
HMGB3-205ENST00000455596 ZNF573Q86YE8 665 aa17.5■□□□□ 0.39
HMGB3-205ENST00000455596 KIR3DL3Q8N743 410 aa17.5■□□□□ 0.39
HMGB3-205ENST00000455596 C8orf46Q8TAG6 207 aa17.5■□□□□ 0.39
HMGB3-205ENST00000455596 UBE2FQ969M7 185 aa17.5■□□□□ 0.39
HMGB3-205ENST00000455596 NOX4Q9NPH5 578 aa17.5■□□□□ 0.39
HMGB3-205ENST00000455596 ACOXLQ9NUZ1 547 aa17.5■□□□□ 0.39
HMGB3-205ENST00000455596 A6NIN4 97 aa17.49■□□□□ 0.39
HMGB3-205ENST00000455596 PSG2P11465 335 aa17.49■□□□□ 0.39
HMGB3-205ENST00000455596 CAV3P56539 151 aa17.49■□□□□ 0.39
HMGB3-205ENST00000455596 ZNF85Q03923 595 aa17.49■□□□□ 0.39
HMGB3-205ENST00000455596 Q6YL49 198 aa17.49■□□□□ 0.39
HMGB3-205ENST00000455596 POC1AQ8NBT0 407 aa17.49■□□□□ 0.39
HMGB3-205ENST00000455596 RORBQ92753 470 aa17.49■□□□□ 0.39
HMGB3-205ENST00000455596 ADI1Q9BV57 179 aa17.49■□□□□ 0.39
HMGB3-205ENST00000455596 PLEKHA1Q9HB21 404 aa17.49■□□□□ 0.39
HMGB3-205ENST00000455596 POLDIP2Q9Y2S7 368 aa17.49■□□□□ 0.39
HMGB3-205ENST00000455596 IGKV1D-17A0A075B6S4 117 aa17.48■□□□□ 0.39
HMGB3-205ENST00000455596 PQLC2LA1A4F0 135 aa17.48■□□□□ 0.39
HMGB3-205ENST00000455596 J3QT63 122 aa17.48■□□□□ 0.39
HMGB3-205ENST00000455596 SYT7O43581 403 aa17.48■□□□□ 0.39
HMGB3-205ENST00000455596 NDUFB7P17568 137 aa17.48■□□□□ 0.39
HMGB3-205ENST00000455596 SNRPGP62308 76 aaKnown RBP17.48■□□□□ 0.39
HMGB3-205ENST00000455596 SMIM21Q3B7S5 101 aa17.48■□□□□ 0.39
HMGB3-205ENST00000455596 SLC25A30Q5SVS4 291 aa17.48■□□□□ 0.39
HMGB3-205ENST00000455596 MEDAGQ5VYS4 303 aa17.48■□□□□ 0.39
HMGB3-205ENST00000455596 C16orf87Q6PH81 154 aa17.48■□□□□ 0.39
HMGB3-205ENST00000455596 ACP7Q6ZNF0 438 aa17.48■□□□□ 0.39
HMGB3-205ENST00000455596 CBR4Q8N4T8 237 aa17.48■□□□□ 0.39
HMGB3-205ENST00000455596 CCDC54Q8NEL0 328 aa17.48■□□□□ 0.39
HMGB3-205ENST00000455596 GNG8Q9UK08 70 aa17.48■□□□□ 0.39
HMGB3-205ENST00000455596 ZNF222Q9UK12 451 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms