RNA–Protein interactions for RNA: ENST00000453056.5

VPS8-213, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-213ENST00000453056 GBX2P52951 348 aaPredicted RBP12.94□□□□□ -0.34
VPS8-213ENST00000453056 ALKBH1Q13686 389 aaKnown RBP12.94□□□□□ -0.34
VPS8-213ENST00000453056 WDR25Q64LD2 544 aaPredicted RBP12.94□□□□□ -0.34
VPS8-213ENST00000453056 HAGHLQ6PII5 290 aaPredicted RBP12.94□□□□□ -0.34
VPS8-213ENST00000453056 TMPRSS11AQ6ZMR5 421 aa12.94□□□□□ -0.34
VPS8-213ENST00000453056 PRIMA1Q86XR5 153 aa12.94□□□□□ -0.34
VPS8-213ENST00000453056 FAM90A1Q86YD7 464 aa12.94□□□□□ -0.34
VPS8-213ENST00000453056 ZNF676Q8N7Q3 588 aa12.94□□□□□ -0.34
VPS8-213ENST00000453056 PP6455Q8WZ26 134 aa12.94□□□□□ -0.34
VPS8-213ENST00000453056 CHST5Q9GZS9 411 aa12.94□□□□□ -0.34
VPS8-213ENST00000453056 C7orf69Q9H7B7 122 aa12.94□□□□□ -0.34
VPS8-213ENST00000453056 CHCHD3Q9NX63 227 aaKnown RBP12.94□□□□□ -0.34
VPS8-213ENST00000453056 NKX1-2Q9UD57 310 aaPredicted RBP12.94□□□□□ -0.34
VPS8-213ENST00000453056 HHLA2Q9UM44 414 aa12.94□□□□□ -0.34
VPS8-213ENST00000453056 POLDIP2Q9Y2S7 368 aa12.94□□□□□ -0.34
VPS8-213ENST00000453056 EXOSC1Q9Y3B2 195 aaKnown RBP12.94□□□□□ -0.34
VPS8-213ENST00000453056 EFCAB10A6NFE3 127 aa12.93□□□□□ -0.34
VPS8-213ENST00000453056 TMEM212A6NML5 194 aa12.93□□□□□ -0.34
VPS8-213ENST00000453056 J3QT63 122 aa12.93□□□□□ -0.34
VPS8-213ENST00000453056 ISG15P05161 165 aa12.93□□□□□ -0.34
VPS8-213ENST00000453056 GMFBP60983 142 aa12.93□□□□□ -0.34
VPS8-213ENST00000453056 HOXA4Q00056 320 aaPredicted RBP12.93□□□□□ -0.34
VPS8-213ENST00000453056 CNN3Q15417 329 aaKnown RBP12.93□□□□□ -0.34
VPS8-213ENST00000453056 SMIM21Q3B7S5 101 aa12.93□□□□□ -0.34
VPS8-213ENST00000453056 CD276Q5ZPR3 534 aa12.93□□□□□ -0.34
VPS8-213ENST00000453056 LYPD2Q6UXB3 125 aa12.93□□□□□ -0.34
VPS8-213ENST00000453056 SLC36A1Q7Z2H8 476 aa12.93□□□□□ -0.34
VPS8-213ENST00000453056 C1QL2Q7Z5L3 287 aa12.93□□□□□ -0.34
VPS8-213ENST00000453056 TMPRSS13Q9BYE2 586 aa12.93□□□□□ -0.34
VPS8-213ENST00000453056 COMMD4Q9H0A8 199 aa12.93□□□□□ -0.34
VPS8-213ENST00000453056 FRRS1LQ9P0K9 344 aa12.93□□□□□ -0.34
VPS8-213ENST00000453056 COL6A5A8TX70 2615 aa12.93□□□□□ -0.34
VPS8-213ENST00000453056 LOC105371242A0A075B767 164 aa12.92□□□□□ -0.34
VPS8-213ENST00000453056 IGHV2-70DA0A0C4DH43 119 aa12.92□□□□□ -0.34
VPS8-213ENST00000453056 PQLC2LA1A4F0 135 aa12.92□□□□□ -0.34
VPS8-213ENST00000453056 A6NIN4 97 aa12.92□□□□□ -0.34
VPS8-213ENST00000453056 H0YJX3 145 aa12.92□□□□□ -0.34
VPS8-213ENST00000453056 TMPRSS2O15393 492 aa12.92□□□□□ -0.34
VPS8-213ENST00000453056 AKR7A2O43488 359 aa12.92□□□□□ -0.34
VPS8-213ENST00000453056 ENSAO43768 121 aaKnown RBP12.92□□□□□ -0.34
VPS8-213ENST00000453056 GNAO1P09471 354 aa12.92□□□□□ -0.34
VPS8-213ENST00000453056 GLRA1P23415 457 aa12.92□□□□□ -0.34
VPS8-213ENST00000453056 HAAOP46952 286 aa12.92□□□□□ -0.34
VPS8-213ENST00000453056 TGM4P49221 684 aa12.92□□□□□ -0.34
VPS8-213ENST00000453056 NANOS3P60323 173 aaKnown RBP12.92□□□□□ -0.34
VPS8-213ENST00000453056 RDH10Q8IZV5 341 aa12.92□□□□□ -0.34
VPS8-213ENST00000453056 OR13C3Q8NGS6 347 aa12.92□□□□□ -0.34
VPS8-213ENST00000453056 NANPQ8TBE9 248 aa12.92□□□□□ -0.34
VPS8-213ENST00000453056 AQP3Q92482 292 aa12.92□□□□□ -0.34
VPS8-213ENST00000453056 RNF166Q96A37 237 aaPredicted RBP12.92□□□□□ -0.34
VPS8-213ENST00000453056 DNTTIP1Q9H147 329 aa12.92□□□□□ -0.34
VPS8-213ENST00000453056 MMP26Q9NRE1 261 aa12.92□□□□□ -0.34
VPS8-213ENST00000453056 KAAG1Q9UBP8 84 aa12.92□□□□□ -0.34
VPS8-213ENST00000453056 METRNQ9UJH8 293 aa12.92□□□□□ -0.34
VPS8-213ENST00000453056 DIMT1Q9UNQ2 313 aaKnown RBP12.92□□□□□ -0.34
VPS8-213ENST00000453056 CAB39Q9Y376 341 aaPredicted RBP12.92□□□□□ -0.34
VPS8-213ENST00000453056 INSIG2Q9Y5U4 225 aa12.92□□□□□ -0.34
VPS8-213ENST00000453056 AUP1Q9Y679 476 aa12.92□□□□□ -0.34
VPS8-213ENST00000453056 OR4C45A6NMZ5 311 aa12.91□□□□□ -0.34
VPS8-213ENST00000453056 TRAPPC2LH3BP13 241 aa12.91□□□□□ -0.34
VPS8-213ENST00000453056 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.91□□□□□ -0.34
VPS8-213ENST00000453056 OCM2P0CE71 109 aa12.91□□□□□ -0.34
VPS8-213ENST00000453056 OCMP0CE72 109 aaPredicted RBP12.91□□□□□ -0.34
VPS8-213ENST00000453056 LIMS3P0CW19 117 aa12.91□□□□□ -0.34
VPS8-213ENST00000453056 LIMS4P0CW20 117 aa12.91□□□□□ -0.34
VPS8-213ENST00000453056 PIPP12273 146 aaPredicted RBP12.91□□□□□ -0.34
VPS8-213ENST00000453056 C11orf91Q3C1V1 193 aa12.91□□□□□ -0.34
VPS8-213ENST00000453056 ARMCX4Q5H9R4 360 aa12.91□□□□□ -0.34
VPS8-213ENST00000453056 DMRTC1Q5HYR2 192 aa12.91□□□□□ -0.34
VPS8-213ENST00000453056 STUMQ69YW2 141 aa12.91□□□□□ -0.34
VPS8-213ENST00000453056 TRMT10AQ8TBZ6 339 aaKnown RBP12.91□□□□□ -0.34
VPS8-213ENST00000453056 NPRL2Q8WTW4 380 aa12.91□□□□□ -0.34
VPS8-213ENST00000453056 RAB40AQ8WXH6 277 aa12.91□□□□□ -0.34
VPS8-213ENST00000453056 TFAP2CQ92754 450 aa12.91□□□□□ -0.34
VPS8-213ENST00000453056 TMIGD2Q96BF3 282 aa12.91□□□□□ -0.34
VPS8-213ENST00000453056 TMEM80Q96HE8 168 aa12.91□□□□□ -0.34
VPS8-213ENST00000453056 NUDT16L1Q9BRJ7 211 aaKnown RBP12.91□□□□□ -0.34
VPS8-213ENST00000453056 ZNF649Q9BS31 505 aa12.91□□□□□ -0.34
VPS8-213ENST00000453056 ISG20L2Q9H9L3 353 aaKnown RBP12.91□□□□□ -0.34
VPS8-213ENST00000453056 NEK6Q9HC98 313 aa12.91□□□□□ -0.34
VPS8-213ENST00000453056 RASL12Q9NYN1 266 aa12.91□□□□□ -0.34
VPS8-213ENST00000453056 CNOT2Q9NZN8 540 aaKnown RBP12.91□□□□□ -0.34
VPS8-213ENST00000453056 NLKQ9UBE8 527 aa12.91□□□□□ -0.34
VPS8-213ENST00000453056 CTSZQ9UBR2 303 aa12.91□□□□□ -0.34
VPS8-213ENST00000453056 FAM230AA0A1W2PPH8 454 aa12.9□□□□□ -0.34
VPS8-213ENST00000453056 RHBDL1O75783 438 aa12.9□□□□□ -0.34
VPS8-213ENST00000453056 ECDO95905 644 aaPredicted RBP12.9□□□□□ -0.34
VPS8-213ENST00000453056 PRKACBP22694 351 aa12.9□□□□□ -0.34
VPS8-213ENST00000453056 FUT6P51993 359 aa12.9□□□□□ -0.34
VPS8-213ENST00000453056 AQP4P55087 323 aa12.9□□□□□ -0.34
VPS8-213ENST00000453056 LRRC10Q5BKY1 277 aa12.9□□□□□ -0.34
VPS8-213ENST00000453056 ZNF841Q6ZN19 808 aa12.9□□□□□ -0.34
VPS8-213ENST00000453056 UTS2BQ765I0 119 aa12.9□□□□□ -0.34
VPS8-213ENST00000453056 POC1AQ8NBT0 407 aa12.9□□□□□ -0.34
VPS8-213ENST00000453056 OR5AK2Q8NH90 309 aa12.9□□□□□ -0.34
VPS8-213ENST00000453056 TSEN15Q8WW01 171 aaKnown RBP12.9□□□□□ -0.34
VPS8-213ENST00000453056 ST8SIA4Q92187 359 aa12.9□□□□□ -0.34
VPS8-213ENST00000453056 ADAT3Q96EY9 351 aaPredicted RBP12.9□□□□□ -0.34
VPS8-213ENST00000453056 BORCS8Q96FH0 119 aa12.9□□□□□ -0.34
VPS8-213ENST00000453056 PKIBQ9C010 78 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms