RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 DMBX1Q8NFW5 382 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 OR13C8Q8NGS7 320 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 ULBP2Q9BZM5 246 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 NELFAQ9H3P2 528 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 OPA3Q9H6K4 179 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 DEPPQ9NTK1 212 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 OPN4Q9UHM6 478 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 FXYD6-FXYD2A0A087WZ82 144 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 PLSCR5A0PG75 271 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 CXorf65A6NEN9 183 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 ARPC5O15511 151 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 DHHO43323 396 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 RGS11O94810 467 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 RAP2BP61225 183 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 USF2Q15853 346 aaPredicted RBP10.59□□□□□ -0.71
COL27A1-202ENST00000451716 NHLRC3Q5JS37 347 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 WIPI1Q5MNZ9 446 aaPredicted RBP10.59□□□□□ -0.71
COL27A1-202ENST00000451716 C1QL2Q7Z5L3 287 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 PTX4Q96A99 478 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 FAM122AQ96E09 287 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 FBXO17Q96EF6 278 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 PIGQQ9BRB3 760 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 FXYD6Q9H0Q3 95 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 MOB1AQ9H8S9 216 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 PLEK2Q9NYT0 353 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 PINLYPA6NC86 204 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 UBE2CO00762 179 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 FAHP16930 419 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 ACP1P24666 158 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 HRH1P35367 487 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 SUCLG1P53597 346 aaKnown RBP10.59□□□□□ -0.71
COL27A1-202ENST00000451716 B3GALT5-AS1P59052 145 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 CSNK2A1P68400 391 aaPredicted RBP10.59□□□□□ -0.71
COL27A1-202ENST00000451716 SSBP1Q04837 148 aaKnown RBP10.59□□□□□ -0.71
COL27A1-202ENST00000451716 ECH1Q13011 328 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 FAM189A2Q15884 450 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 C6orf15Q6UXA7 325 aaPredicted RBP10.59□□□□□ -0.71
COL27A1-202ENST00000451716 CBLN2Q8IUK8 224 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 TMEM54Q969K7 222 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 MRPS24Q96EL2 167 aaKnown RBP10.59□□□□□ -0.71
COL27A1-202ENST00000451716 C1orf147Q96MC9 270 aaPredicted RBP10.59□□□□□ -0.71
COL27A1-202ENST00000451716 LPAR5Q9H1C0 372 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 MED9Q9NWA0 146 aa10.59□□□□□ -0.71
COL27A1-202ENST00000451716 ZNF230Q9UIE0 474 aaPredicted RBP10.59□□□□□ -0.71
COL27A1-202ENST00000451716 PCSK5Q92824 1860 aa10.58□□□□□ -0.71
COL27A1-202ENST00000451716 A0A0A6YYH2 397 aa10.58□□□□□ -0.72
COL27A1-202ENST00000451716 LNP1A1A4G5 178 aa10.58□□□□□ -0.72
COL27A1-202ENST00000451716 A6NJ64 397 aa10.58□□□□□ -0.72
COL27A1-202ENST00000451716 TMEM14DPA8MWL7 114 aa10.58□□□□□ -0.72
COL27A1-202ENST00000451716 CXCL13O43927 109 aa10.58□□□□□ -0.72
COL27A1-202ENST00000451716 NFYAP23511 347 aaPredicted RBP10.58□□□□□ -0.72
COL27A1-202ENST00000451716 NUTF2P61970 127 aaKnown RBP10.58□□□□□ -0.72
COL27A1-202ENST00000451716 GRB2P62993 217 aaKnown RBP10.58□□□□□ -0.72
COL27A1-202ENST00000451716 CLINT1Q14677 625 aa10.58□□□□□ -0.72
COL27A1-202ENST00000451716 RNASE10Q5GAN6 216 aaKnown RBP10.58□□□□□ -0.72
COL27A1-202ENST00000451716 PLAC9Q5JTB6 97 aa10.58□□□□□ -0.72
COL27A1-202ENST00000451716 SFRP5Q5T4F7 317 aa10.58□□□□□ -0.72
COL27A1-202ENST00000451716 SPINK14Q6IE38 97 aa10.58□□□□□ -0.72
COL27A1-202ENST00000451716 RAB12Q6IQ22 244 aa10.58□□□□□ -0.72
COL27A1-202ENST00000451716 BEST3Q8N1M1 668 aa10.58□□□□□ -0.72
COL27A1-202ENST00000451716 GJC3Q8NFK1 279 aa10.58□□□□□ -0.72
COL27A1-202ENST00000451716 OR10K1Q8NGX5 313 aa10.58□□□□□ -0.72
COL27A1-202ENST00000451716 OR10R2Q8NGX6 335 aa10.58□□□□□ -0.72
COL27A1-202ENST00000451716 OR14K1Q8NGZ2 314 aa10.58□□□□□ -0.72
COL27A1-202ENST00000451716 COQ8AQ8NI60 647 aa10.58□□□□□ -0.72
COL27A1-202ENST00000451716 MRGPRFQ96AM1 343 aa10.58□□□□□ -0.72
COL27A1-202ENST00000451716 ZNF845Q96IR2 970 aaPredicted RBP10.58□□□□□ -0.72
COL27A1-202ENST00000451716 SGCZQ96LD1 299 aa10.58□□□□□ -0.72
COL27A1-202ENST00000451716 ALKBH3Q96Q83 286 aaPredicted RBP10.58□□□□□ -0.72
COL27A1-202ENST00000451716 NAA11Q9BSU3 229 aaPredicted RBP10.58□□□□□ -0.72
COL27A1-202ENST00000451716 P4HTMQ9NXG6 502 aa10.58□□□□□ -0.72
COL27A1-202ENST00000451716 VSIG4Q9Y279 399 aa10.58□□□□□ -0.72
COL27A1-202ENST00000451716 C5orf52A6NGY3 159 aa10.58□□□□□ -0.72
COL27A1-202ENST00000451716 B4E171 279 aa10.58□□□□□ -0.72
COL27A1-202ENST00000451716 F5H5P2 479 aa10.58□□□□□ -0.72
COL27A1-202ENST00000451716 L7N2F9 121 aa10.58□□□□□ -0.72
COL27A1-202ENST00000451716 PMP2P02689 132 aa10.58□□□□□ -0.72
COL27A1-202ENST00000451716 CD74P04233 296 aa10.58□□□□□ -0.72
COL27A1-202ENST00000451716 ERCC1P07992 297 aaPredicted RBP10.58□□□□□ -0.72
COL27A1-202ENST00000451716 NMBP08949 121 aa10.58□□□□□ -0.72
COL27A1-202ENST00000451716 LSM6P62312 80 aaKnown RBP10.58□□□□□ -0.72
COL27A1-202ENST00000451716 OPCMLQ14982 345 aa10.58□□□□□ -0.72
COL27A1-202ENST00000451716 UNQ6494/PRO21346Q6UXR6 183 aa10.58□□□□□ -0.72
COL27A1-202ENST00000451716 DOK3Q7L591 496 aa10.58□□□□□ -0.72
COL27A1-202ENST00000451716 SLCO5A1Q9H2Y9 848 aa10.58□□□□□ -0.72
COL27A1-202ENST00000451716 DNAJC13O75165 2243 aa10.57□□□□□ -0.72
COL27A1-202ENST00000451716 CCDC187A0A096LP49 1063 aa10.57□□□□□ -0.72
COL27A1-202ENST00000451716 A0A1W2PNU3 283 aaPredicted RBP10.57□□□□□ -0.72
COL27A1-202ENST00000451716 OR14I1A6ND48 311 aa10.57□□□□□ -0.72
COL27A1-202ENST00000451716 LRRC3CA6NJW4 275 aa10.57□□□□□ -0.72
COL27A1-202ENST00000451716 A8MXE2 369 aa10.57□□□□□ -0.72
COL27A1-202ENST00000451716 VAMP5O95183 116 aa10.57□□□□□ -0.72
COL27A1-202ENST00000451716 JMJD7P0C870 316 aa10.57□□□□□ -0.72
COL27A1-202ENST00000451716 CD96P40200 585 aa10.57□□□□□ -0.72
COL27A1-202ENST00000451716 SNAI3Q3KNW1 292 aa10.57□□□□□ -0.72
COL27A1-202ENST00000451716 C10orf128Q5T292 105 aa10.57□□□□□ -0.72
COL27A1-202ENST00000451716 DTWD2Q8NBA8 298 aa10.57□□□□□ -0.72
COL27A1-202ENST00000451716 OR2AE1Q8NHA4 323 aa10.57□□□□□ -0.72
COL27A1-202ENST00000451716 PNPLA2Q96AD5 504 aa10.57□□□□□ -0.72
COL27A1-202ENST00000451716 NTNG2Q96CW9 530 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms