RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 OR5P3Q8WZ94 311 aa11.03□□□□□ -0.64
VPS33A-202ENST00000451053 AP3S1Q92572 193 aa11.03□□□□□ -0.64
VPS33A-202ENST00000451053 SLC25A46Q96AG3 418 aa11.03□□□□□ -0.64
VPS33A-202ENST00000451053 ITPKCQ96DU7 683 aa11.03□□□□□ -0.64
VPS33A-202ENST00000451053 CPNE2Q96FN4 548 aaPredicted RBP11.03□□□□□ -0.64
VPS33A-202ENST00000451053 DCUN1D5Q9BTE7 237 aa11.03□□□□□ -0.64
VPS33A-202ENST00000451053 EGLN1Q9GZT9 426 aa11.03□□□□□ -0.64
VPS33A-202ENST00000451053 CXXC4Q9H2H0 198 aa11.03□□□□□ -0.64
VPS33A-202ENST00000451053 ABCB9Q9NP78 766 aa11.03□□□□□ -0.64
VPS33A-202ENST00000451053 GPR173Q9NS66 373 aa11.03□□□□□ -0.64
VPS33A-202ENST00000451053 TAS2R4Q9NYW5 299 aa11.03□□□□□ -0.64
VPS33A-202ENST00000451053 NOP16Q9Y3C1 178 aaKnown RBP11.03□□□□□ -0.64
VPS33A-202ENST00000451053 CACNG2Q9Y698 323 aa11.03□□□□□ -0.64
VPS33A-202ENST00000451053 TRAV8-7A0A075B6U6 113 aa11.02□□□□□ -0.65
VPS33A-202ENST00000451053 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.02□□□□□ -0.65
VPS33A-202ENST00000451053 LOC100289279A0A1B0GTE1 492 aa11.02□□□□□ -0.65
VPS33A-202ENST00000451053 ANKRD61A6NGH8 418 aa11.02□□□□□ -0.65
VPS33A-202ENST00000451053 ANXA2P2A6NMY6 339 aa11.02□□□□□ -0.65
VPS33A-202ENST00000451053 SULT1B1O43704 296 aa11.02□□□□□ -0.65
VPS33A-202ENST00000451053 NRASP01111 189 aa11.02□□□□□ -0.65
VPS33A-202ENST00000451053 ZNF182P17025 639 aaPredicted RBP11.02□□□□□ -0.65
VPS33A-202ENST00000451053 BDKRB2P30411 391 aa11.02□□□□□ -0.65
VPS33A-202ENST00000451053 THBS2P35442 1172 aa11.02□□□□□ -0.65
VPS33A-202ENST00000451053 SRP9P49458 86 aaKnown RBP11.02□□□□□ -0.65
VPS33A-202ENST00000451053 CARTPTQ16568 116 aa11.02□□□□□ -0.65
VPS33A-202ENST00000451053 PLCXD3Q63HM9 321 aa11.02□□□□□ -0.65
VPS33A-202ENST00000451053 ZNF529Q6P280 563 aa11.02□□□□□ -0.65
VPS33A-202ENST00000451053 MOB3CQ70IA8 216 aa11.02□□□□□ -0.65
VPS33A-202ENST00000451053 CDH26Q8IXH8 852 aa11.02□□□□□ -0.65
VPS33A-202ENST00000451053 SPERTQ8NA61 448 aa11.02□□□□□ -0.65
VPS33A-202ENST00000451053 RDH5Q92781 318 aa11.02□□□□□ -0.65
VPS33A-202ENST00000451053 SPSB1Q96BD6 273 aa11.02□□□□□ -0.65
VPS33A-202ENST00000451053 FOXRED1Q96CU9 486 aaPredicted RBP11.02□□□□□ -0.65
VPS33A-202ENST00000451053 TMEM138Q9NPI0 162 aa11.02□□□□□ -0.65
VPS33A-202ENST00000451053 TREM2Q9NZC2 230 aa11.02□□□□□ -0.65
VPS33A-202ENST00000451053 ITPR2Q14571 2701 aa11.02□□□□□ -0.65
VPS33A-202ENST00000451053 CHD3Q12873 2000 aaKnown RBP11.01□□□□□ -0.65
VPS33A-202ENST00000451053 ANKRD17O75179 2603 aaKnown RBP11.01□□□□□ -0.65
VPS33A-202ENST00000451053 IGHV1-69-2A0A0G2JMI3 117 aa11.01□□□□□ -0.65
VPS33A-202ENST00000451053 NOTOA8MTQ0 251 aa11.01□□□□□ -0.65
VPS33A-202ENST00000451053 RP2O75695 350 aa11.01□□□□□ -0.65
VPS33A-202ENST00000451053 ATF1P18846 271 aa11.01□□□□□ -0.65
VPS33A-202ENST00000451053 TNFRSF1AP19438 455 aa11.01□□□□□ -0.65
VPS33A-202ENST00000451053 PRKACBP22694 351 aa11.01□□□□□ -0.65
VPS33A-202ENST00000451053 PMELP40967 661 aa11.01□□□□□ -0.65
VPS33A-202ENST00000451053 GPM6AP51674 278 aa11.01□□□□□ -0.65
VPS33A-202ENST00000451053 MPPED2Q15777 294 aa11.01□□□□□ -0.65
VPS33A-202ENST00000451053 UBE2V2Q15819 145 aa11.01□□□□□ -0.65
VPS33A-202ENST00000451053 GLT8D1Q68CQ7 371 aa11.01□□□□□ -0.65
VPS33A-202ENST00000451053 DNM1P46Q6ZS02 220 aa11.01□□□□□ -0.65
VPS33A-202ENST00000451053 LRRTM1Q86UE6 522 aa11.01□□□□□ -0.65
VPS33A-202ENST00000451053 MOGAT3Q86VF5 341 aa11.01□□□□□ -0.65
VPS33A-202ENST00000451053 CELF2-AS1Q8N7Q2 184 aa11.01□□□□□ -0.65
VPS33A-202ENST00000451053 OR13C9Q8NGT0 318 aa11.01□□□□□ -0.65
VPS33A-202ENST00000451053 RNF170Q96K19 258 aa11.01□□□□□ -0.65
VPS33A-202ENST00000451053 MICU1Q9BPX6 476 aa11.01□□□□□ -0.65
VPS33A-202ENST00000451053 MRI1Q9BV20 369 aa11.01□□□□□ -0.65
VPS33A-202ENST00000451053 RTL8AQ9BWD3 113 aa11.01□□□□□ -0.65
VPS33A-202ENST00000451053 GCM1Q9NP62 436 aa11.01□□□□□ -0.65
VPS33A-202ENST00000451053 UFSP2Q9NUQ7 469 aa11.01□□□□□ -0.65
VPS33A-202ENST00000451053 C14orf119Q9NWQ9 140 aa11.01□□□□□ -0.65
VPS33A-202ENST00000451053 DCAF16Q9NXF7 216 aa11.01□□□□□ -0.65
VPS33A-202ENST00000451053 A3GALT2U3KPV4 340 aa11.01□□□□□ -0.65
VPS33A-202ENST00000451053 V9GY05 133 aa11.01□□□□□ -0.65
VPS33A-202ENST00000451053 IGKV1-9A0A0C4DH69 117 aa11□□□□□ -0.65
VPS33A-202ENST00000451053 SHISA3A0PJX4 238 aa11□□□□□ -0.65
VPS33A-202ENST00000451053 PTBP3O95758 552 aaKnown RBP11□□□□□ -0.65
VPS33A-202ENST00000451053 MAS1P04201 325 aa11□□□□□ -0.65
VPS33A-202ENST00000451053 ALDOBP05062 364 aa11□□□□□ -0.65
VPS33A-202ENST00000451053 GRPP07492 148 aa11□□□□□ -0.65
VPS33A-202ENST00000451053 HCKP08631 526 aa11□□□□□ -0.65
VPS33A-202ENST00000451053 GATA4P43694 442 aa11□□□□□ -0.65
VPS33A-202ENST00000451053 PDLIM4P50479 330 aa11□□□□□ -0.65
VPS33A-202ENST00000451053 MRPS11P82912 194 aaKnown RBP11□□□□□ -0.65
VPS33A-202ENST00000451053 MZT1Q08AG7 82 aa11□□□□□ -0.65
VPS33A-202ENST00000451053 CLEC12BQ2HXU8 276 aa11□□□□□ -0.65
VPS33A-202ENST00000451053 CEACAM21Q3KPI0 293 aa11□□□□□ -0.65
VPS33A-202ENST00000451053 ASPHD2Q6ICH7 369 aa11□□□□□ -0.65
VPS33A-202ENST00000451053 SFXN4Q6P4A7 337 aa11□□□□□ -0.65
VPS33A-202ENST00000451053 PRSS57Q6UWY2 283 aa11□□□□□ -0.65
VPS33A-202ENST00000451053 WFDC11Q8NEX6 87 aa11□□□□□ -0.65
VPS33A-202ENST00000451053 TRMT10AQ8TBZ6 339 aaKnown RBP11□□□□□ -0.65
VPS33A-202ENST00000451053 NPRL2Q8WTW4 380 aa11□□□□□ -0.65
VPS33A-202ENST00000451053 ACOT12Q8WYK0 555 aa11□□□□□ -0.65
VPS33A-202ENST00000451053 FAM168AQ92567 244 aa11□□□□□ -0.65
VPS33A-202ENST00000451053 CCL17Q92583 94 aa11□□□□□ -0.65
VPS33A-202ENST00000451053 KCTD12Q96CX2 325 aaKnown RBP11□□□□□ -0.65
VPS33A-202ENST00000451053 ORAI1Q96D31 301 aa11□□□□□ -0.65
VPS33A-202ENST00000451053 HIST1H2AAQ96QV6 131 aa11□□□□□ -0.65
VPS33A-202ENST00000451053 MYOZ1Q9NP98 299 aaPredicted RBP11□□□□□ -0.65
VPS33A-202ENST00000451053 SLC7A11Q9UPY5 501 aa11□□□□□ -0.65
VPS33A-202ENST00000451053 PPP1R3CQ9UQK1 317 aa11□□□□□ -0.65
VPS33A-202ENST00000451053 AK6Q9Y3D8 172 aaKnown RBP11□□□□□ -0.65
VPS33A-202ENST00000451053 NAV2Q8IVL1 2488 aa11□□□□□ -0.65
VPS33A-202ENST00000451053 TANC2Q9HCD6 1990 aa10.99□□□□□ -0.65
VPS33A-202ENST00000451053 TACC2O95359 2948 aa10.99□□□□□ -0.65
VPS33A-202ENST00000451053 IGHV4-30-2A0A087WSY4 118 aa10.99□□□□□ -0.65
VPS33A-202ENST00000451053 PQLC2LA1A4F0 135 aa10.99□□□□□ -0.65
VPS33A-202ENST00000451053 ZNF732B4DXR9 585 aa10.99□□□□□ -0.65
VPS33A-202ENST00000451053 AIPO00170 330 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms