RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 SIGLEC5O15389 551 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 SELENOFO60613 162 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 EIF1BO60739 113 aaKnown RBP8.3□□□□□ -1.08
SMC6-207ENST00000448223 HTR1DP28221 377 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 EIF1P41567 113 aaKnown RBP8.3□□□□□ -1.08
SMC6-207ENST00000448223 KIR2DS4P43632 304 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 CSN1S1P47710 185 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 SHC2P98077 582 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 KIR2DS1Q14954 304 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 SSX1Q16384 188 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 ACER2Q5QJU3 275 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 MRPL2Q5T653 305 aaKnown RBP8.3□□□□□ -1.08
SMC6-207ENST00000448223 WBP2NLQ6ICG8 309 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 VHLLQ6RSH7 139 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 GPR32P1Q8NGA4 272 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 SMIM19Q96E16 107 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 MIXL1Q9H2W2 232 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 FAM206AQ9NX38 181 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 SERTAD3Q9UJW9 196 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 SRPK3Q9UPE1 567 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 GREB1Q4ZG55 1949 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 PLPP1O14494 284 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 ARPC3O15145 178 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 ZNF264O43296 627 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 CSNK1EP49674 416 aaKnown RBP8.3□□□□□ -1.08
SMC6-207ENST00000448223 ELAVL3Q14576 367 aaKnown RBP8.3□□□□□ -1.08
SMC6-207ENST00000448223 DPY19L2P2Q6ZN68 376 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 MYPOPQ86VE0 399 aaPredicted RBP8.3□□□□□ -1.08
SMC6-207ENST00000448223 SLC38A9Q8NBW4 561 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 OR4S1Q8NGB4 309 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 OR1P1Q8NH06 330 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 FBLIM1Q8WUP2 373 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 ALG14Q96F25 216 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 A0A1W2PP55 124 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 C9J4A7 227 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 SRSF9Q13242 221 aaKnown RBP eCLIP8.3□□□□□ -1.08
SMC6-207ENST00000448223 RAB32Q13637 225 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 FZD2Q14332 565 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 PLA1AQ53H76 456 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 FBXO46Q6PJ61 603 aaPredicted RBP8.3□□□□□ -1.08
SMC6-207ENST00000448223 PHOSPHO2Q8TCD6 241 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 RNF133Q8WVZ7 376 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 ZG16BQ96DA0 208 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 NEIL1Q96FI4 390 aaPredicted RBP8.3□□□□□ -1.08
SMC6-207ENST00000448223 DERL3Q96Q80 235 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 FGF20Q9NP95 211 aaPredicted RBP8.3□□□□□ -1.08
SMC6-207ENST00000448223 GNG12Q9UBI6 72 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 KCNE1BA0A087WTH5 132 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 TRBV5-4A0A0C4DH59 114 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 H3BML4 177 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 NEURL1O76050 574 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 SHHQ15465 462 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 PMCHL1Q16048 86 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 DRAM2Q6UX65 266 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 STAC2Q6ZMT1 411 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 LDLRAD3Q86YD5 345 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 TCEAL8Q8IYN2 117 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 SYS1Q8N2H4 156 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 TMEM255BQ8WV15 326 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 PEX11GQ96HA9 241 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 HINT3Q9NQE9 182 aaKnown RBP8.3□□□□□ -1.08
SMC6-207ENST00000448223 TAS2R4Q9NYW5 299 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 PEF1Q9UBV8 284 aaKnown RBP8.3□□□□□ -1.08
SMC6-207ENST00000448223 OPN4Q9UHM6 478 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 TMED3Q9Y3Q3 217 aa8.3□□□□□ -1.08
SMC6-207ENST00000448223 PRSS1P07477 247 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 CTXN2P0C2S0 81 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 ZNF77Q15935 545 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 ZNF542PQ5EBM4 170 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 TRMT61AQ96FX7 289 aaKnown RBP8.29□□□□□ -1.08
SMC6-207ENST00000448223 SLC6A18Q96N87 628 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 WFDC6Q9BQY6 131 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 OR2J1Q9GZK6 312 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 HRASLS2Q9NWW9 162 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 SLC5A10A0PJK1 596 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 SULT2B1O00204 365 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 TMPRSS11DO60235 418 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 HBQ1P09105 142 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 HIST1H1TP22492 207 aaPredicted RBP8.29□□□□□ -1.08
SMC6-207ENST00000448223 CD1CP29017 333 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 BRS3P32247 399 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 CTAG1AP78358 180 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 GKN2Q86XP6 184 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 ARRDC1Q8N5I2 433 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 NCOR1P1Q9H4R4 102 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 GNG7O60262 68 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 ADAP1O75689 374 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 PIAS2O75928 621 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 SLCO2B1O94956 709 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 CER1O95813 267 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 IGHG1P01857 330 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 THBS4P35443 961 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 GPR12P47775 334 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 TRA2BP62995 288 aaKnown RBP8.29□□□□□ -1.08
SMC6-207ENST00000448223 CDK5R1Q15078 307 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 HTR3DQ70Z44 454 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 GDF7Q7Z4P5 450 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 OR10G8Q8NGN5 311 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 DCBLD2Q96PD2 775 aa8.29□□□□□ -1.08
SMC6-207ENST00000448223 SRD5A3Q9H8P0 318 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms