RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 A0A0B4J203 849 aa16.6■□□□□ 0.25
SGCE-207ENST00000447873 TMEM210A6NLX4 147 aa16.6■□□□□ 0.25
SGCE-207ENST00000447873 C17orf100A8MU93 164 aa16.6■□□□□ 0.25
SGCE-207ENST00000447873 CTAG2O75638 210 aa16.6■□□□□ 0.25
SGCE-207ENST00000447873 IGHV1-46P01743 117 aa16.6■□□□□ 0.25
SGCE-207ENST00000447873 TMEM225BP0DP42 221 aa16.6■□□□□ 0.25
SGCE-207ENST00000447873 TNFSF4P23510 183 aa16.6■□□□□ 0.25
SGCE-207ENST00000447873 PTGFRP43088 359 aa16.6■□□□□ 0.25
SGCE-207ENST00000447873 RANBP1P43487 201 aa16.6■□□□□ 0.25
SGCE-207ENST00000447873 MAB21L1Q13394 359 aa16.6■□□□□ 0.25
SGCE-207ENST00000447873 SWI5Q1ZZU3 235 aa16.6■□□□□ 0.25
SGCE-207ENST00000447873 FAM76BQ5HYJ3 339 aa16.6■□□□□ 0.25
SGCE-207ENST00000447873 CALHM1Q8IU99 346 aa16.6■□□□□ 0.25
SGCE-207ENST00000447873 ACOT12Q8WYK0 555 aa16.6■□□□□ 0.25
SGCE-207ENST00000447873 DIRC2Q96SL1 478 aa16.6■□□□□ 0.25
SGCE-207ENST00000447873 S100A13Q99584 98 aa16.6■□□□□ 0.25
SGCE-207ENST00000447873 MS4A5Q9H3V2 200 aa16.6■□□□□ 0.25
SGCE-207ENST00000447873 UBTD1Q9HAC8 227 aa16.6■□□□□ 0.25
SGCE-207ENST00000447873 ABRACLQ9P1F3 81 aa16.6■□□□□ 0.25
SGCE-207ENST00000447873 MRPS28Q9Y2Q9 187 aaKnown RBP16.6■□□□□ 0.25
SGCE-207ENST00000447873 DCHS2Q6V1P9 2916 aa16.59■□□□□ 0.25
SGCE-207ENST00000447873 LOC100289279A0A1B0GTE1 492 aa16.59■□□□□ 0.25
SGCE-207ENST00000447873 LRP5LA4QPB2 252 aa16.59■□□□□ 0.25
SGCE-207ENST00000447873 GRPP07492 148 aa16.59■□□□□ 0.25
SGCE-207ENST00000447873 SNRPBP14678 240 aaKnown RBP16.59■□□□□ 0.25
SGCE-207ENST00000447873 ARSBP15848 533 aa16.59■□□□□ 0.25
SGCE-207ENST00000447873 ZP1P60852 638 aa16.59■□□□□ 0.25
SGCE-207ENST00000447873 AGAP6Q5VW22 663 aa16.59■□□□□ 0.25
SGCE-207ENST00000447873 MZT2AQ6P582 158 aa16.59■□□□□ 0.25
SGCE-207ENST00000447873 HAGHLQ6PII5 290 aaPredicted RBP16.59■□□□□ 0.25
SGCE-207ENST00000447873 OR51D1Q8NGF3 324 aa16.59■□□□□ 0.25
SGCE-207ENST00000447873 SLC25A28Q96A46 364 aa16.59■□□□□ 0.25
SGCE-207ENST00000447873 FAM3DQ96BQ1 224 aa16.59■□□□□ 0.25
SGCE-207ENST00000447873 MRI1Q9BV20 369 aa16.59■□□□□ 0.25
SGCE-207ENST00000447873 NXF2Q9GZY0 626 aaKnown RBP16.59■□□□□ 0.25
SGCE-207ENST00000447873 CLEC4MQ9H2X3 399 aaPredicted RBP16.59■□□□□ 0.25
SGCE-207ENST00000447873 MMP27Q9H306 513 aa16.59■□□□□ 0.25
SGCE-207ENST00000447873 OR51I2Q9H344 312 aa16.59■□□□□ 0.25
SGCE-207ENST00000447873 COMMD3Q9UBI1 195 aa16.59■□□□□ 0.25
SGCE-207ENST00000447873 A3GALT2U3KPV4 340 aa16.59■□□□□ 0.25
SGCE-207ENST00000447873 ARFGEF3Q5TH69 2177 aa16.59■□□□□ 0.25
SGCE-207ENST00000447873 A0A075B6Q4 140 aa16.58■□□□□ 0.24
SGCE-207ENST00000447873 IGHV3-64DA0A0J9YX35 117 aa16.58■□□□□ 0.24
SGCE-207ENST00000447873 SPRY1O43609 319 aaPredicted RBP16.58■□□□□ 0.24
SGCE-207ENST00000447873 PAHP00439 452 aa16.58■□□□□ 0.24
SGCE-207ENST00000447873 CALCBP10092 127 aa16.58■□□□□ 0.24
SGCE-207ENST00000447873 CD200P41217 278 aa16.58■□□□□ 0.24
SGCE-207ENST00000447873 SRP9P49458 86 aaKnown RBP16.58■□□□□ 0.24
SGCE-207ENST00000447873 CAPZA1P52907 286 aa16.58■□□□□ 0.24
SGCE-207ENST00000447873 TNFAIP6P98066 277 aaPredicted RBP16.58■□□□□ 0.24
SGCE-207ENST00000447873 TLE4Q04727 773 aa16.58■□□□□ 0.24
SGCE-207ENST00000447873 PDZK1IP1Q13113 114 aa16.58■□□□□ 0.24
SGCE-207ENST00000447873 GLIPR1L1Q6UWM5 242 aa16.58■□□□□ 0.24
SGCE-207ENST00000447873 WDR86Q86TI4 376 aa16.58■□□□□ 0.24
SGCE-207ENST00000447873 ZNF611Q8N823 705 aa16.58■□□□□ 0.24
SGCE-207ENST00000447873 OR2V2Q96R30 315 aa16.58■□□□□ 0.24
SGCE-207ENST00000447873 CBLN4Q9NTU7 201 aa16.58■□□□□ 0.24
SGCE-207ENST00000447873 ING4Q9UNL4 249 aa16.58■□□□□ 0.24
SGCE-207ENST00000447873 DOPEY2Q9Y3R5 2298 aa16.57■□□□□ 0.24
SGCE-207ENST00000447873 ANGPTL7O43827 346 aa16.57■□□□□ 0.24
SGCE-207ENST00000447873 CLPXO76031 633 aa16.57■□□□□ 0.24
SGCE-207ENST00000447873 ADH4P08319 380 aa16.57■□□□□ 0.24
SGCE-207ENST00000447873 BMXP51813 675 aa16.57■□□□□ 0.24
SGCE-207ENST00000447873 ZNF154Q13106 437 aa16.57■□□□□ 0.24
SGCE-207ENST00000447873 C2orf76Q3KRA6 126 aa16.57■□□□□ 0.24
SGCE-207ENST00000447873 SLC25A26Q70HW3 274 aa16.57■□□□□ 0.24
SGCE-207ENST00000447873 ZCCHC24Q8N2G6 241 aaKnown RBP16.57■□□□□ 0.24
SGCE-207ENST00000447873 SCCPDHQ8NBX0 429 aa16.57■□□□□ 0.24
SGCE-207ENST00000447873 LGALS14Q8TCE9 139 aa16.57■□□□□ 0.24
SGCE-207ENST00000447873 ELL3Q9HB65 397 aaPredicted RBP16.57■□□□□ 0.24
SGCE-207ENST00000447873 SMURF1Q9HCE7 757 aa16.57■□□□□ 0.24
SGCE-207ENST00000447873 OR5V1Q9UGF6 321 aa16.57■□□□□ 0.24
SGCE-207ENST00000447873 IL19Q9UHD0 177 aa16.57■□□□□ 0.24
SGCE-207ENST00000447873 FBXO9Q9UK97 447 aaPredicted RBP16.57■□□□□ 0.24
SGCE-207ENST00000447873 CHD3Q12873 2000 aaKnown RBP16.57■□□□□ 0.24
SGCE-207ENST00000447873 RGS5O15539 181 aa16.56■□□□□ 0.24
SGCE-207ENST00000447873 BPNT1O95861 308 aa16.56■□□□□ 0.24
SGCE-207ENST00000447873 CYB5AP00167 134 aa16.56■□□□□ 0.24
SGCE-207ENST00000447873 DANCRP0C864 163 aa16.56■□□□□ 0.24
SGCE-207ENST00000447873 BMP4P12644 408 aa16.56■□□□□ 0.24
SGCE-207ENST00000447873 COL8A1P27658 744 aa16.56■□□□□ 0.24
SGCE-207ENST00000447873 DYNC1I2Q13409 638 aaKnown RBP16.56■□□□□ 0.24
SGCE-207ENST00000447873 PRAMEF6Q5VXH4 476 aa16.56■□□□□ 0.24
SGCE-207ENST00000447873 C1QL2Q7Z5L3 287 aa16.56■□□□□ 0.24
SGCE-207ENST00000447873 MKXQ8IYA7 352 aa16.56■□□□□ 0.24
SGCE-207ENST00000447873 CELF2-AS1Q8N7Q2 184 aa16.56■□□□□ 0.24
SGCE-207ENST00000447873 ZSCAN4Q8NAM6 433 aaPredicted RBP16.56■□□□□ 0.24
SGCE-207ENST00000447873 OR51F2Q8NH61 342 aa16.56■□□□□ 0.24
SGCE-207ENST00000447873 TBC1D15Q8TC07 691 aa16.56■□□□□ 0.24
SGCE-207ENST00000447873 MEGF10Q96KG7 1140 aa16.56■□□□□ 0.24
SGCE-207ENST00000447873 PSMG3-AS1Q96PY0 264 aa16.56■□□□□ 0.24
SGCE-207ENST00000447873 PKIBQ9C010 78 aa16.56■□□□□ 0.24
SGCE-207ENST00000447873 GHRLQ9UBU3 117 aa16.56■□□□□ 0.24
SGCE-207ENST00000447873 SPATA2Q9UM82 520 aa16.56■□□□□ 0.24
SGCE-207ENST00000447873 CACNA1DQ01668 2161 aa16.56■□□□□ 0.24
SGCE-207ENST00000447873 RAI1Q7Z5J4 1906 aaPredicted RBP16.56■□□□□ 0.24
SGCE-207ENST00000447873 A6NLC8 198 aa16.55■□□□□ 0.24
SGCE-207ENST00000447873 J3QT63 122 aa16.55■□□□□ 0.24
SGCE-207ENST00000447873 CTDSP2O14595 271 aa16.55■□□□□ 0.24
SGCE-207ENST00000447873 CDIPTO14735 213 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms