RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 OR5B2Q96R09 309 aa7.06□□□□□ -1.28
SMG1-202ENST00000446231 CCL26Q9Y258 94 aa7.06□□□□□ -1.28
SMG1-202ENST00000446231 MBPP02686 304 aaPredicted RBP7.06□□□□□ -1.28
SMG1-202ENST00000446231 VIPR2P41587 438 aa7.06□□□□□ -1.28
SMG1-202ENST00000446231 BAXQ07812 192 aa7.06□□□□□ -1.28
SMG1-202ENST00000446231 IL24Q13007 206 aa7.06□□□□□ -1.28
SMG1-202ENST00000446231 GVQW1Q8N7I0 195 aa7.06□□□□□ -1.28
SMG1-202ENST00000446231 GTF3AQ92664 365 aaKnown RBP7.06□□□□□ -1.28
SMG1-202ENST00000446231 KTI12Q96EK9 354 aaPredicted RBP7.06□□□□□ -1.28
SMG1-202ENST00000446231 CHST11Q9NPF2 352 aa7.06□□□□□ -1.28
SMG1-202ENST00000446231 FAM24AA6NFZ4 105 aa7.06□□□□□ -1.28
SMG1-202ENST00000446231 CLN3Q13286 438 aa7.06□□□□□ -1.28
SMG1-202ENST00000446231 HNRNPA1L2Q32P51 320 aaKnown RBP7.06□□□□□ -1.28
SMG1-202ENST00000446231 AARDQ4LEZ3 155 aa7.06□□□□□ -1.28
SMG1-202ENST00000446231 STUMQ69YW2 141 aa7.06□□□□□ -1.28
SMG1-202ENST00000446231 NPSR1Q6W5P4 371 aa7.06□□□□□ -1.28
SMG1-202ENST00000446231 OR5C1Q8NGR4 320 aa7.06□□□□□ -1.28
SMG1-202ENST00000446231 RAB40CQ96S21 281 aa7.06□□□□□ -1.28
SMG1-202ENST00000446231 SLC46A2Q9BY10 475 aa7.06□□□□□ -1.28
SMG1-202ENST00000446231 SLC35D1Q9NTN3 355 aa7.06□□□□□ -1.28
SMG1-202ENST00000446231 DNAJB12Q9NXW2 375 aaKnown RBP7.06□□□□□ -1.28
SMG1-202ENST00000446231 NKX2-6A6NCS4 301 aa7.06□□□□□ -1.28
SMG1-202ENST00000446231 C5orf52A6NGY3 159 aa7.06□□□□□ -1.28
SMG1-202ENST00000446231 ZNF808Q8N4W9 903 aaPredicted RBP7.06□□□□□ -1.28
SMG1-202ENST00000446231 CIB3Q96Q77 187 aaPredicted RBP7.06□□□□□ -1.28
SMG1-202ENST00000446231 OPN3Q9H1Y3 402 aaPredicted RBP7.06□□□□□ -1.28
SMG1-202ENST00000446231 MARCH5Q9NX47 278 aa7.06□□□□□ -1.28
SMG1-202ENST00000446231 PSENENQ9NZ42 101 aa7.06□□□□□ -1.28
SMG1-202ENST00000446231 FUT9Q9Y231 359 aa7.06□□□□□ -1.28
SMG1-202ENST00000446231 CLEC18AA5D8T8 446 aa7.06□□□□□ -1.28
SMG1-202ENST00000446231 DIRC3C9JPN6 131 aa7.06□□□□□ -1.28
SMG1-202ENST00000446231 PLAC9Q5JTB6 97 aa7.06□□□□□ -1.28
SMG1-202ENST00000446231 CLEC18CQ8NCF0 446 aa7.06□□□□□ -1.28
SMG1-202ENST00000446231 TIMM29Q9BSF4 260 aa7.06□□□□□ -1.28
SMG1-202ENST00000446231 WDR13Q9H1Z4 485 aa7.06□□□□□ -1.28
SMG1-202ENST00000446231 R3HDMLQ9H3Y0 253 aa7.06□□□□□ -1.28
SMG1-202ENST00000446231 ZDHHC8Q9ULC8 765 aa7.06□□□□□ -1.28
SMG1-202ENST00000446231 MCM3APO60318 1980 aa7.06□□□□□ -1.28
SMG1-202ENST00000446231 COX5AP20674 150 aa7.06□□□□□ -1.28
SMG1-202ENST00000446231 FBXL14Q8N1E6 418 aa7.06□□□□□ -1.28
SMG1-202ENST00000446231 SYNGR4O95473 234 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 PMCHP20382 165 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 MMP16P51512 607 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 TMEM255AQ5JRV8 349 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 SF3B6Q9Y3B4 125 aaKnown RBP7.05□□□□□ -1.28
SMG1-202ENST00000446231 NACAE9PAV3 2078 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 SNRPCP09234 159 aaKnown RBP7.05□□□□□ -1.28
SMG1-202ENST00000446231 UBE2G2P60604 165 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 TRIM61Q5EBN2 209 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 CARFQ8N187 725 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 FRRS1LQ9P0K9 344 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 CLCF1Q9UBD9 225 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 CD74P04233 296 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 SLC25A6P12236 298 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 LIMK1P53667 647 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 POC1AQ8NBT0 407 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 PCGF1Q9BSM1 259 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 TUBA4BQ9H853 241 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 PNLIPRP2P54317 469 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 SRSF3P84103 164 aaKnown RBP7.05□□□□□ -1.28
SMG1-202ENST00000446231 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.05□□□□□ -1.28
SMG1-202ENST00000446231 C16orf82Q7Z2V1 217 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 SLC22A12Q96S37 553 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 BTCP35070 178 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 GPM6BQ13491 265 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 GRASPQ7Z6J2 395 aaPredicted RBP7.05□□□□□ -1.28
SMG1-202ENST00000446231 OR2D3Q8NGH3 330 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 OR1P1Q8NH06 330 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 TRAV8-7A0A075B6U6 113 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 GCM2O75603 506 aaPredicted RBP7.05□□□□□ -1.28
SMG1-202ENST00000446231 HIST1H1DP16402 221 aaKnown RBP7.05□□□□□ -1.28
SMG1-202ENST00000446231 PAFAH1B2P68402 229 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 TNFRSF9Q07011 255 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 PSMF1Q92530 271 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 MFAP5Q13361 173 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 VDAC3Q9Y277 283 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 AQP7P3A6NL99 342 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 H0Y8G0 127 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 C1QCP02747 245 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 BCL2P10415 239 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 STARD6P59095 220 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 MPV17LQ2QL34 196 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 TCTN2Q96GX1 697 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 HSPB9Q9BQS6 159 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 TMEM106CQ9BVX2 250 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 LIPGQ9Y5X9 500 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 K7ESM1 405 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 FFAR4Q5NUL3 377 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 WBP2Q969T9 261 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 LCORQ96JN0 433 aaPredicted RBP7.05□□□□□ -1.28
SMG1-202ENST00000446231 HOXA5P20719 270 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 AMER3Q8N944 861 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 OR10C1Q96KK4 312 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 DYSFO75923 2080 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 SRP14P37108 136 aaKnown RBP7.05□□□□□ -1.28
SMG1-202ENST00000446231 VN1R1Q9GZP7 353 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 M0R1X1 148 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 ABLIM3O94929 683 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 C2orf88Q9BSF0 95 aa7.05□□□□□ -1.28
SMG1-202ENST00000446231 DEGS1O15121 323 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms