RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 ACTRT1Q8TDG2 376 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 RNASEH2CQ8TDP1 164 aaKnown RBP3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 RXFP2Q8WXD0 754 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 ITFG2Q969R8 447 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 NTAN1Q96AB6 310 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 CCDC127Q96BQ5 260 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 DCPSQ96C86 337 aaKnown RBP3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 HAUS1Q96CS2 278 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 TMEM101Q96IK0 257 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 FAM19A4Q96LR4 140 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 ZNF488Q96MN9 340 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 RDH12Q96NR8 316 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 VAT1Q99536 393 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 TEAD3Q99594 435 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 SPZ1Q9BXG8 430 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 SLC25A2Q9BXI2 301 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 POTEKPQ9BYX7 375 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 COA1Q9GZY4 146 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 MYOZ1Q9NP98 299 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 RRAGDQ9NQL2 400 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 SDHAF3Q9NRP4 125 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 NAGKQ9UJ70 344 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 SIGLEC9Q9Y336 463 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 CCDC18Q5T9S5 1454 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 CCDC141Q6ZP82 1450 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 PRRC2AP48634 2157 aaKnown RBP3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 EHBP1L1Q8N3D4 1523 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 TNS1Q9HBL0 1735 aaKnown RBP3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 TRAV8-4A0A0B4J246 113 aa3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 KLF18A0A0U1RQI7 1052 aa3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 A0A1B0GX12 115 aa3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 SLC5A10A0PJK1 596 aa3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 GOLGA8IPA6NC78 632 aa3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 EPOPA6NHQ4 379 aa3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 ZNF233A6NK53 670 aa3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 ZFP92A6NM28 416 aa3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 A8MU10 97 aa3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 NPIPB7O75200 414 aa3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 P01737 135 aa3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 RCC1P18754 421 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 HTR1EP28566 365 aa3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 RBMXP38159 391 aaKnown RBP3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 STX17P56962 302 aa3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 KDSRQ06136 332 aa3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 RAB31Q13636 194 aa3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 TRAM1Q15629 374 aa3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 ZNHIT3Q15649 155 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 MFSD14CQ5VZR4 134 aa3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 HBMQ6B0K9 141 aa3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 PLET1Q6UQ28 207 aa3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 ACP7Q6ZNF0 438 aa3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 BBS7Q8IWZ6 715 aa3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 CEND1Q8N111 149 aa3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 COX18Q8N8Q8 333 aa3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 C20orf203Q8NBC4 194 aa3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 ATP6V1C2Q8NEY4 427 aa3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 OR8G5Q8NG78 346 aa3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 OR5AK3PQ8NH89 298 aa3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 C16orf74Q96GX8 76 aa3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 SULT4A1Q9BR01 284 aa3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 ING2Q9H160 280 aa3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 UCK1Q9HA47 277 aa3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 ZDHHC4Q9NPG8 344 aa3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 ASCL3Q9NQ33 180 aa3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 FAM49BQ9NUQ9 324 aa3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 VAX2Q9UIW0 290 aa3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 CLEC4EQ9ULY5 219 aa3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 PSG8Q9UQ74 426 aa3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 FYCO1Q9BQS8 1478 aa3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 NUP188Q5SRE5 1749 aa3.13□□□□□ -1.91
HMGB1P48-201ENST00000446155 CASZ1Q86V15 1759 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 CASKIN1Q8WXD9 1431 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 RREB1Q92766 1687 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 A0A0J9YXV3 536 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 ISPDA4D126 451 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 GJE1A6NN92 205 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 H0Y9J4 135 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 TNFRSF11BO00300 401 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 RAD1O60671 282 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 AHSA1O95433 338 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 HTR1DP28221 377 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 TUFMP49411 452 aaKnown RBP3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 RPL14P50914 215 aaKnown RBP3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 AQP5P55064 265 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 OR10A3P58181 314 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 TAS2R46P59540 309 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 HERVK_113P61574 105 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 MRPS15P82914 257 aaKnown RBP3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 PSG5Q15238 335 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 TMEM249Q2WGJ8 235 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 OR10J3Q5JRS4 329 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 TIMM23BQ5SRD1 257 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 IDNKQ5T6J7 187 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 METTL21CQ5VZV1 264 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 AP1ARQ63HQ0 302 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 DNAJC24Q6P3W2 148 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 ARL9Q6T311 187 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 SH2D6Q7Z4S9 175 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 SLC7A5P1Q8MH63 180 aa3.12□□□□□ -1.91
HMGB1P48-201ENST00000446155 METTL13Q8N6R0 699 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms