RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 MAS1LP35410 378 aa12.3□□□□□ -0.44
VPS52-212ENST00000445902 SCARF2Q96GP6 870 aaPredicted RBP12.3□□□□□ -0.44
VPS52-212ENST00000445902 TMED7-TICAM2A0A0A6YYA0 188 aa12.29□□□□□ -0.44
VPS52-212ENST00000445902 TRGC1P0CF51 173 aa12.29□□□□□ -0.44
VPS52-212ENST00000445902 BLVRBP30043 206 aaPredicted RBP12.29□□□□□ -0.44
VPS52-212ENST00000445902 P2RY1P47900 373 aa12.29□□□□□ -0.44
VPS52-212ENST00000445902 C1QL2Q7Z5L3 287 aa12.29□□□□□ -0.44
VPS52-212ENST00000445902 SGPP2Q8IWX5 399 aa12.29□□□□□ -0.44
VPS52-212ENST00000445902 OR5AS1Q8N127 324 aa12.29□□□□□ -0.44
VPS52-212ENST00000445902 OR10AD1Q8NGE0 317 aa12.29□□□□□ -0.44
VPS52-212ENST00000445902 KCNG3Q8TAE7 436 aa12.29□□□□□ -0.44
VPS52-212ENST00000445902 ZNF700Q9H0M5 742 aa12.29□□□□□ -0.44
VPS52-212ENST00000445902 LIPGQ9Y5X9 500 aa12.29□□□□□ -0.44
VPS52-212ENST00000445902 CHD9Q3L8U1 2897 aa12.29□□□□□ -0.44
VPS52-212ENST00000445902 SHANK1Q9Y566 2161 aa12.29□□□□□ -0.44
VPS52-212ENST00000445902 IL33O95760 270 aa12.29□□□□□ -0.44
VPS52-212ENST00000445902 HPNP05981 417 aa12.29□□□□□ -0.44
VPS52-212ENST00000445902 IFI6P09912 130 aa12.29□□□□□ -0.44
VPS52-212ENST00000445902 GP1BBP13224 206 aa12.29□□□□□ -0.44
VPS52-212ENST00000445902 ZNF385CQ66K41 422 aaPredicted RBP12.29□□□□□ -0.44
VPS52-212ENST00000445902 P4HA3Q7Z4N8 544 aa12.29□□□□□ -0.44
VPS52-212ENST00000445902 C17orf78Q8N4C9 275 aa12.29□□□□□ -0.44
VPS52-212ENST00000445902 FRZBQ92765 325 aa12.29□□□□□ -0.44
VPS52-212ENST00000445902 NUDT22Q9BRQ3 303 aa12.29□□□□□ -0.44
VPS52-212ENST00000445902 ELL3Q9HB65 397 aaPredicted RBP12.29□□□□□ -0.44
VPS52-212ENST00000445902 CA14Q9ULX7 337 aa12.29□□□□□ -0.44
VPS52-212ENST00000445902 SLCO1B1Q9Y6L6 691 aa12.29□□□□□ -0.44
VPS52-212ENST00000445902 PTPRSQ13332 1948 aa12.29□□□□□ -0.44
VPS52-212ENST00000445902 A6NCN8 305 aa12.28□□□□□ -0.44
VPS52-212ENST00000445902 CELA2BP08218 269 aaPredicted RBP12.28□□□□□ -0.44
VPS52-212ENST00000445902 JMJD7P0C870 316 aa12.28□□□□□ -0.44
VPS52-212ENST00000445902 RABIFP47224 123 aa12.28□□□□□ -0.44
VPS52-212ENST00000445902 PPM1FP49593 454 aaPredicted RBP12.28□□□□□ -0.44
VPS52-212ENST00000445902 MMP16P51512 607 aa12.28□□□□□ -0.44
VPS52-212ENST00000445902 WDR92Q96MX6 357 aa12.28□□□□□ -0.44
VPS52-212ENST00000445902 GINS3Q9BRX5 216 aa12.28□□□□□ -0.44
VPS52-212ENST00000445902 TUBD1Q9UJT1 453 aa12.28□□□□□ -0.44
VPS52-212ENST00000445902 ANAPC10Q9UM13 185 aa12.28□□□□□ -0.44
VPS52-212ENST00000445902 WASF3Q9UPY6 502 aa12.28□□□□□ -0.44
VPS52-212ENST00000445902 C2orf72A6NCS6 295 aa12.28□□□□□ -0.44
VPS52-212ENST00000445902 RBFOX3A6NFN3 312 aa12.28□□□□□ -0.44
VPS52-212ENST00000445902 DXOO77932 396 aaKnown RBP12.28□□□□□ -0.44
VPS52-212ENST00000445902 OMGP23515 440 aa12.28□□□□□ -0.44
VPS52-212ENST00000445902 AFF3P51826 1226 aaKnown RBP12.28□□□□□ -0.44
VPS52-212ENST00000445902 RND3P61587 244 aa12.28□□□□□ -0.44
VPS52-212ENST00000445902 POU3F1Q03052 451 aaPredicted RBP12.28□□□□□ -0.44
VPS52-212ENST00000445902 CHAF1BQ13112 559 aa12.28□□□□□ -0.44
VPS52-212ENST00000445902 LYZL2Q7Z4W2 148 aa12.28□□□□□ -0.44
VPS52-212ENST00000445902 OOSP2Q86WS3 158 aa12.28□□□□□ -0.44
VPS52-212ENST00000445902 CYB561D1Q8N8Q1 229 aa12.28□□□□□ -0.44
VPS52-212ENST00000445902 OR52M1Q8NGK5 317 aa12.28□□□□□ -0.44
VPS52-212ENST00000445902 OR10S1Q8NGN2 331 aa12.28□□□□□ -0.44
VPS52-212ENST00000445902 HPSE2Q8WWQ2 592 aa12.28□□□□□ -0.44
VPS52-212ENST00000445902 SNX22Q96L94 193 aa12.28□□□□□ -0.44
VPS52-212ENST00000445902 PACRGQ96M98 296 aaPredicted RBP12.28□□□□□ -0.44
VPS52-212ENST00000445902 ATG101Q9BSB4 218 aa12.28□□□□□ -0.44
VPS52-212ENST00000445902 OR10A2Q9H208 303 aa12.28□□□□□ -0.44
VPS52-212ENST00000445902 ARV1Q9H2C2 271 aa12.28□□□□□ -0.44
VPS52-212ENST00000445902 PLEKHA2Q9HB19 425 aa12.28□□□□□ -0.44
VPS52-212ENST00000445902 FAM86C1Q9NVL1 165 aa12.28□□□□□ -0.44
VPS52-212ENST00000445902 DHRS7CA6NNS2 312 aa12.27□□□□□ -0.44
VPS52-212ENST00000445902 E5RGE8 158 aa12.27□□□□□ -0.44
VPS52-212ENST00000445902 NPIPA5E9PKD4 350 aa12.27□□□□□ -0.44
VPS52-212ENST00000445902 SLC33A1O00400 549 aaPredicted RBP12.27□□□□□ -0.44
VPS52-212ENST00000445902 BCAT2O15382 392 aaPredicted RBP12.27□□□□□ -0.44
VPS52-212ENST00000445902 CTNNB1P35222 781 aa12.27□□□□□ -0.44
VPS52-212ENST00000445902 TAS2R46P59540 309 aa12.27□□□□□ -0.44
VPS52-212ENST00000445902 TFF2Q03403 129 aa12.27□□□□□ -0.44
VPS52-212ENST00000445902 NFATC4Q14934 902 aa12.27□□□□□ -0.44
VPS52-212ENST00000445902 ZNF429Q86V71 674 aa12.27□□□□□ -0.44
VPS52-212ENST00000445902 ABHD5Q8WTS1 349 aa12.27□□□□□ -0.44
VPS52-212ENST00000445902 RNF133Q8WVZ7 376 aa12.27□□□□□ -0.44
VPS52-212ENST00000445902 C11orf40Q8WZ69 217 aa12.27□□□□□ -0.44
VPS52-212ENST00000445902 UNKLQ9H9P5 680 aaKnown RBP12.27□□□□□ -0.44
VPS52-212ENST00000445902 PRODH2Q9UF12 536 aa12.27□□□□□ -0.44
VPS52-212ENST00000445902 NPIPA1Q9UND3 350 aa12.27□□□□□ -0.44
VPS52-212ENST00000445902 NSG2Q9Y328 171 aa12.27□□□□□ -0.44
VPS52-212ENST00000445902 B3GALT1Q9Y5Z6 326 aa12.27□□□□□ -0.44
VPS52-212ENST00000445902 TCAPO15273 167 aa12.27□□□□□ -0.45
VPS52-212ENST00000445902 PLRG1O43660 514 aaKnown RBP12.27□□□□□ -0.45
VPS52-212ENST00000445902 NOVA1P51513 510 aaKnown RBP12.27□□□□□ -0.45
VPS52-212ENST00000445902 FXYD4P59646 89 aa12.27□□□□□ -0.45
VPS52-212ENST00000445902 PRTGQ2VWP7 1150 aa12.27□□□□□ -0.45
VPS52-212ENST00000445902 AKR1C8PQ5T2L2 129 aa12.27□□□□□ -0.45
VPS52-212ENST00000445902 ZNF776Q68DI1 518 aaPredicted RBP12.27□□□□□ -0.45
VPS52-212ENST00000445902 MVB12AQ96EY5 273 aa12.27□□□□□ -0.45
VPS52-212ENST00000445902 TBL1XR1Q9BZK7 514 aa12.27□□□□□ -0.45
VPS52-212ENST00000445902 GPR84Q9NQS5 396 aa12.27□□□□□ -0.45
VPS52-212ENST00000445902 CUTCQ9NTM9 273 aa12.27□□□□□ -0.45
VPS52-212ENST00000445902 ZNF319Q9P2F9 582 aa12.27□□□□□ -0.45
VPS52-212ENST00000445902 POLR1DQ9Y2S0 133 aa12.27□□□□□ -0.45
VPS52-212ENST00000445902 HSD17B6O14756 317 aa12.27□□□□□ -0.45
VPS52-212ENST00000445902 OR5AC1P0C628 307 aa12.27□□□□□ -0.45
VPS52-212ENST00000445902 IL12BP29460 328 aa12.27□□□□□ -0.45
VPS52-212ENST00000445902 IL2RGP31785 369 aa12.27□□□□□ -0.45
VPS52-212ENST00000445902 OR8G1Q15617 311 aa12.27□□□□□ -0.45
VPS52-212ENST00000445902 BEND4Q6ZU67 534 aa12.27□□□□□ -0.45
VPS52-212ENST00000445902 C6orf201Q7Z4U5 140 aa12.27□□□□□ -0.45
VPS52-212ENST00000445902 CPEB2Q7Z5Q1 589 aaKnown RBP12.27□□□□□ -0.45
VPS52-212ENST00000445902 LAMA1P25391 3075 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms