RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 CGB2Q6NT52 195 aa11.54□□□□□ -0.56
HMGN1-208ENST00000443046 THAP5Q7Z6K1 395 aa11.54□□□□□ -0.56
HMGN1-208ENST00000443046 OR11H6Q8NGC7 330 aa11.54□□□□□ -0.56
HMGN1-208ENST00000443046 GNPDA2Q8TDQ7 276 aa11.54□□□□□ -0.56
HMGN1-208ENST00000443046 LYZL4Q96KX0 146 aa11.54□□□□□ -0.56
HMGN1-208ENST00000443046 AMELYQ99218 206 aa11.54□□□□□ -0.56
HMGN1-208ENST00000443046 KCTD14Q9BQ13 255 aaPredicted RBP11.54□□□□□ -0.56
HMGN1-208ENST00000443046 ABHD6Q9BV23 337 aa11.54□□□□□ -0.56
HMGN1-208ENST00000443046 ABCB10Q9NRK6 738 aa11.54□□□□□ -0.56
HMGN1-208ENST00000443046 RASL12Q9NYN1 266 aa11.54□□□□□ -0.56
HMGN1-208ENST00000443046 IL20Q9NYY1 176 aa11.54□□□□□ -0.56
HMGN1-208ENST00000443046 ABCD2Q9UBJ2 740 aa11.54□□□□□ -0.56
HMGN1-208ENST00000443046 SAMD4AQ9UPU9 718 aaKnown RBP11.54□□□□□ -0.56
HMGN1-208ENST00000443046 DSCAML1Q8TD84 2053 aa11.54□□□□□ -0.56
HMGN1-208ENST00000443046 PF4P02776 101 aa11.53□□□□□ -0.56
HMGN1-208ENST00000443046 SPI1P17947 270 aa11.53□□□□□ -0.56
HMGN1-208ENST00000443046 IFNGR2P38484 337 aa11.53□□□□□ -0.56
HMGN1-208ENST00000443046 GPM6AP51674 278 aa11.53□□□□□ -0.56
HMGN1-208ENST00000443046 EIF2B1Q14232 305 aaKnown RBP11.53□□□□□ -0.56
HMGN1-208ENST00000443046 SSX2Q16385 188 aa11.53□□□□□ -0.56
HMGN1-208ENST00000443046 ZNF626Q68DY1 528 aa11.53□□□□□ -0.56
HMGN1-208ENST00000443046 GLYATQ6IB77 296 aa11.53□□□□□ -0.56
HMGN1-208ENST00000443046 RPL13AP3Q6NVV1 102 aa11.53□□□□□ -0.56
HMGN1-208ENST00000443046 HACD2Q6Y1H2 254 aa11.53□□□□□ -0.56
HMGN1-208ENST00000443046 ACP7Q6ZNF0 438 aa11.53□□□□□ -0.56
HMGN1-208ENST00000443046 KCTD8Q6ZWB6 473 aa11.53□□□□□ -0.56
HMGN1-208ENST00000443046 ZDHHC23Q8IYP9 409 aa11.53□□□□□ -0.56
HMGN1-208ENST00000443046 ZNF561Q8N587 486 aa11.53□□□□□ -0.56
HMGN1-208ENST00000443046 LINC00482Q8N8I6 264 aa11.53□□□□□ -0.56
HMGN1-208ENST00000443046 OR8D4Q8NGM9 314 aa11.53□□□□□ -0.56
HMGN1-208ENST00000443046 AQP3Q92482 292 aa11.53□□□□□ -0.56
HMGN1-208ENST00000443046 PIGCQ92535 297 aa11.53□□□□□ -0.56
HMGN1-208ENST00000443046 DNAJC27Q9NZQ0 273 aa11.53□□□□□ -0.56
HMGN1-208ENST00000443046 TCRBV4S1A1TA0A5B7 111 aa11.52□□□□□ -0.57
HMGN1-208ENST00000443046 RFPL4AA6NLU0 287 aa11.52□□□□□ -0.57
HMGN1-208ENST00000443046 HMGB1P1B2RPK0 211 aaPredicted RBP11.52□□□□□ -0.57
HMGN1-208ENST00000443046 RFPL4AL1F8VTS6 287 aa11.52□□□□□ -0.57
HMGN1-208ENST00000443046 F2RL2O00254 374 aa11.52□□□□□ -0.57
HMGN1-208ENST00000443046 NDUFAB1O14561 156 aa11.52□□□□□ -0.57
HMGN1-208ENST00000443046 ARG1P05089 322 aa11.52□□□□□ -0.57
HMGN1-208ENST00000443046 NHLRC4P0CG21 123 aaPredicted RBP11.52□□□□□ -0.57
HMGN1-208ENST00000443046 CLUP10909 449 aa11.52□□□□□ -0.57
HMGN1-208ENST00000443046 JUNBP17275 347 aaPredicted RBP11.52□□□□□ -0.57
HMGN1-208ENST00000443046 CAPZA1P52907 286 aa11.52□□□□□ -0.57
HMGN1-208ENST00000443046 BLVRAP53004 296 aa11.52□□□□□ -0.57
HMGN1-208ENST00000443046 GNG3P63215 75 aa11.52□□□□□ -0.57
HMGN1-208ENST00000443046 CRMP1Q14194 572 aa11.52□□□□□ -0.57
HMGN1-208ENST00000443046 ZNF782Q6ZMW2 699 aaPredicted RBP11.52□□□□□ -0.57
HMGN1-208ENST00000443046 CCDC121Q6ZUS5 278 aa11.52□□□□□ -0.57
HMGN1-208ENST00000443046 TIGD4Q8IY51 512 aa11.52□□□□□ -0.57
HMGN1-208ENST00000443046 OR4M1Q8NGD0 313 aa11.52□□□□□ -0.57
HMGN1-208ENST00000443046 OR52L1Q8NGH7 329 aa11.52□□□□□ -0.57
HMGN1-208ENST00000443046 OR2T27Q8NH04 317 aa11.52□□□□□ -0.57
HMGN1-208ENST00000443046 ZNF671Q8TAW3 534 aa11.52□□□□□ -0.57
HMGN1-208ENST00000443046 MYDGFQ969H8 173 aa11.52□□□□□ -0.57
HMGN1-208ENST00000443046 PGAM5Q96HS1 289 aa11.52□□□□□ -0.57
HMGN1-208ENST00000443046 CSMD3Q7Z407 3707 aa11.51□□□□□ -0.57
HMGN1-208ENST00000443046 STARD9Q9P2P6 4700 aa11.51□□□□□ -0.57
HMGN1-208ENST00000443046 ZNF732B4DXR9 585 aa11.51□□□□□ -0.57
HMGN1-208ENST00000443046 C3orf84H3BNL1 204 aa11.51□□□□□ -0.57
HMGN1-208ENST00000443046 RBP4P02753 201 aa11.51□□□□□ -0.57
HMGN1-208ENST00000443046 COX4I1P13073 169 aa11.51□□□□□ -0.57
HMGN1-208ENST00000443046 AZGP1P25311 298 aaKnown RBP11.51□□□□□ -0.57
HMGN1-208ENST00000443046 PRDX2P32119 198 aa11.51□□□□□ -0.57
HMGN1-208ENST00000443046 HMGA2P52926 109 aa11.51□□□□□ -0.57
HMGN1-208ENST00000443046 DCTN2Q13561 401 aaKnown RBP11.51□□□□□ -0.57
HMGN1-208ENST00000443046 CEACAM21Q3KPI0 293 aa11.51□□□□□ -0.57
HMGN1-208ENST00000443046 ARSJQ5FYB0 599 aaPredicted RBP11.51□□□□□ -0.57
HMGN1-208ENST00000443046 ZNF770Q6IQ21 691 aaPredicted RBP11.51□□□□□ -0.57
HMGN1-208ENST00000443046 LCN8Q6JVE9 175 aa11.51□□□□□ -0.57
HMGN1-208ENST00000443046 CENPVQ7Z7K6 275 aaPredicted RBP11.51□□□□□ -0.57
HMGN1-208ENST00000443046 OR13D1Q8NGV5 346 aa11.51□□□□□ -0.57
HMGN1-208ENST00000443046 PYURFQ96I23 114 aa11.51□□□□□ -0.57
HMGN1-208ENST00000443046 GPR61Q9BZJ8 451 aa11.51□□□□□ -0.57
HMGN1-208ENST00000443046 GORASP2Q9H8Y8 452 aa11.51□□□□□ -0.57
HMGN1-208ENST00000443046 BRD7Q9NPI1 651 aa11.51□□□□□ -0.57
HMGN1-208ENST00000443046 U3KQK5 164 aa11.51□□□□□ -0.57
HMGN1-208ENST00000443046 SLC1A7O00341 560 aa11.5□□□□□ -0.57
HMGN1-208ENST00000443046 NOS1APO75052 506 aaPredicted RBP11.5□□□□□ -0.57
HMGN1-208ENST00000443046 RRM2P31350 389 aa11.5□□□□□ -0.57
HMGN1-208ENST00000443046 ETV3LQ6ZN32 361 aa11.5□□□□□ -0.57
HMGN1-208ENST00000443046 RASSF6Q6ZTQ3 369 aa11.5□□□□□ -0.57
HMGN1-208ENST00000443046 MRPL41Q8IXM3 137 aaKnown RBP11.5□□□□□ -0.57
HMGN1-208ENST00000443046 POC1AQ8NBT0 407 aa11.5□□□□□ -0.57
HMGN1-208ENST00000443046 OR5A2Q8NGI9 324 aa11.5□□□□□ -0.57
HMGN1-208ENST00000443046 OR6K6Q8NGW6 343 aa11.5□□□□□ -0.57
HMGN1-208ENST00000443046 OR4Q3Q8NH05 313 aa11.5□□□□□ -0.57
HMGN1-208ENST00000443046 HIST1H2AAQ96QV6 131 aa11.5□□□□□ -0.57
HMGN1-208ENST00000443046 INTS14Q96SY0 518 aa11.5□□□□□ -0.57
HMGN1-208ENST00000443046 BTBD10Q9BSF8 475 aa11.5□□□□□ -0.57
HMGN1-208ENST00000443046 EFCAB1Q9HAE3 211 aa11.5□□□□□ -0.57
HMGN1-208ENST00000443046 TK1P04183 234 aa11.49□□□□□ -0.57
HMGN1-208ENST00000443046 SF3A3Q12874 501 aaKnown RBP eCLIP11.49□□□□□ -0.576e-7■□□□□ 11.3
HMGN1-208ENST00000443046 SMIM21Q3B7S5 101 aa11.49□□□□□ -0.57
HMGN1-208ENST00000443046 CEP78Q5JTW2 689 aa11.49□□□□□ -0.57
HMGN1-208ENST00000443046 NKAPLQ5M9Q1 402 aa11.49□□□□□ -0.57
HMGN1-208ENST00000443046 C10orf99Q6UWK7 81 aa11.49□□□□□ -0.57
HMGN1-208ENST00000443046 C16orf82Q7Z2V1 217 aa11.49□□□□□ -0.57
HMGN1-208ENST00000443046 RNF144BQ7Z419 303 aa11.49□□□□□ -0.57
HMGN1-208ENST00000443046 ERI1Q8IV48 349 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms