RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 ZNF283Q8N7M2 679 aa7.37□□□□□ -1.23
USP6NL-203ENST00000443016 SPRYD4Q8WW59 207 aaPredicted RBP7.37□□□□□ -1.23
USP6NL-203ENST00000443016 SLAMF6Q96DU3 332 aa7.37□□□□□ -1.23
USP6NL-203ENST00000443016 ABHD6Q9BV23 337 aa7.37□□□□□ -1.23
USP6NL-203ENST00000443016 NIPAL2Q9H841 368 aa7.37□□□□□ -1.23
USP6NL-203ENST00000443016 ACOT13Q9NPJ3 140 aa7.37□□□□□ -1.23
USP6NL-203ENST00000443016 TMEM100Q9NV29 134 aa7.37□□□□□ -1.23
USP6NL-203ENST00000443016 GNG8Q9UK08 70 aa7.37□□□□□ -1.23
USP6NL-203ENST00000443016 COPS3Q9UNS2 423 aa7.37□□□□□ -1.23
USP6NL-203ENST00000443016 M0R135 149 aa7.37□□□□□ -1.23
USP6NL-203ENST00000443016 ZNF205O95201 554 aa7.37□□□□□ -1.23
USP6NL-203ENST00000443016 AVPP01185 164 aa7.37□□□□□ -1.23
USP6NL-203ENST00000443016 IGHV2-70P01814 119 aa7.37□□□□□ -1.23
USP6NL-203ENST00000443016 APOC1P02654 83 aa7.37□□□□□ -1.23
USP6NL-203ENST00000443016 HLA-DPB1P04440 258 aa7.37□□□□□ -1.23
USP6NL-203ENST00000443016 ACSM4P0C7M7 580 aa7.37□□□□□ -1.23
USP6NL-203ENST00000443016 PSMB9P28065 219 aa7.37□□□□□ -1.23
USP6NL-203ENST00000443016 HSD11B1P28845 292 aa7.37□□□□□ -1.23
USP6NL-203ENST00000443016 MDH2P40926 338 aaKnown RBP7.37□□□□□ -1.23
USP6NL-203ENST00000443016 RIDAP52758 137 aaKnown RBP7.37□□□□□ -1.23
USP6NL-203ENST00000443016 GBX2P52951 348 aaPredicted RBP7.37□□□□□ -1.23
USP6NL-203ENST00000443016 GRB2P62993 217 aaKnown RBP7.37□□□□□ -1.23
USP6NL-203ENST00000443016 ZNF85Q03923 595 aa7.37□□□□□ -1.23
USP6NL-203ENST00000443016 GK2Q14410 553 aaPredicted RBP7.37□□□□□ -1.23
USP6NL-203ENST00000443016 ZMYND11Q15326 602 aa7.37□□□□□ -1.23
USP6NL-203ENST00000443016 SPHARQ15513 63 aa7.37□□□□□ -1.23
USP6NL-203ENST00000443016 ZNF829Q3KNS6 432 aaPredicted RBP7.37□□□□□ -1.23
USP6NL-203ENST00000443016 ZNF679Q8IYX0 411 aa7.37□□□□□ -1.23
USP6NL-203ENST00000443016 NANOGP1Q8N7R0 232 aa7.37□□□□□ -1.23
USP6NL-203ENST00000443016 YIPF7Q8N8F6 280 aa7.37□□□□□ -1.23
USP6NL-203ENST00000443016 ZNF420Q8TAQ5 688 aaPredicted RBP7.37□□□□□ -1.23
USP6NL-203ENST00000443016 WDR89Q96FK6 387 aaPredicted RBP7.37□□□□□ -1.23
USP6NL-203ENST00000443016 ZNF799Q96GE5 643 aa7.37□□□□□ -1.23
USP6NL-203ENST00000443016 C4orf36Q96KX1 117 aa7.37□□□□□ -1.23
USP6NL-203ENST00000443016 OR8B4Q96RC9 309 aa7.37□□□□□ -1.23
USP6NL-203ENST00000443016 C1QTNF5Q9BXJ0 243 aa7.37□□□□□ -1.23
USP6NL-203ENST00000443016 TTTY10Q9BZA0 68 aa7.37□□□□□ -1.23
USP6NL-203ENST00000443016 BRD7Q9NPI1 651 aa7.37□□□□□ -1.23
USP6NL-203ENST00000443016 PCDHB16Q9NRJ7 776 aa7.37□□□□□ -1.23
USP6NL-203ENST00000443016 CENPMQ9NSP4 180 aa7.37□□□□□ -1.23
USP6NL-203ENST00000443016 ZNF281Q9Y2X9 895 aa7.37□□□□□ -1.23
USP6NL-203ENST00000443016 ARHGAP32A7KAX9 2087 aa7.37□□□□□ -1.23
USP6NL-203ENST00000443016 DYSFO75923 2080 aa7.37□□□□□ -1.23
USP6NL-203ENST00000443016 A0A0A6YYJ9 748 aa7.36□□□□□ -1.23
USP6NL-203ENST00000443016 METTL15A6NJ78 407 aa7.36□□□□□ -1.23
USP6NL-203ENST00000443016 F5H5P2 479 aa7.36□□□□□ -1.23
USP6NL-203ENST00000443016 J3QLW9 94 aa7.36□□□□□ -1.23
USP6NL-203ENST00000443016 IFNL4K9M1U5 179 aa7.36□□□□□ -1.23
USP6NL-203ENST00000443016 IRF2P14316 349 aa7.36□□□□□ -1.23
USP6NL-203ENST00000443016 ZNF19P17023 458 aa7.36□□□□□ -1.23
USP6NL-203ENST00000443016 SOX6P35712 828 aa7.36□□□□□ -1.23
USP6NL-203ENST00000443016 MAP2K4P45985 399 aa7.36□□□□□ -1.23
USP6NL-203ENST00000443016 BDH1Q02338 343 aa7.36□□□□□ -1.23
USP6NL-203ENST00000443016 ROM1Q03395 351 aa7.36□□□□□ -1.23
USP6NL-203ENST00000443016 EMX1Q04741 257 aaPredicted RBP7.36□□□□□ -1.23
USP6NL-203ENST00000443016 TMEM155Q4W5P6 130 aa7.36□□□□□ -1.23
USP6NL-203ENST00000443016 ESCO2Q56NI9 601 aa7.36□□□□□ -1.23
USP6NL-203ENST00000443016 UBE2UQ5VVX9 321 aa7.36□□□□□ -1.23
USP6NL-203ENST00000443016 C1orf229Q6ZS94 237 aaPredicted RBP7.36□□□□□ -1.23
USP6NL-203ENST00000443016 NAA40Q86UY6 237 aa7.36□□□□□ -1.23
USP6NL-203ENST00000443016 LRRC28Q86X40 367 aaPredicted RBP7.36□□□□□ -1.23
USP6NL-203ENST00000443016 MUC20Q8N307 709 aaPredicted RBP7.36□□□□□ -1.23
USP6NL-203ENST00000443016 BPIFB2Q8N4F0 458 aa7.36□□□□□ -1.23
USP6NL-203ENST00000443016 RNF133Q8WVZ7 376 aa7.36□□□□□ -1.23
USP6NL-203ENST00000443016 NEIL1Q96FI4 390 aaPredicted RBP7.36□□□□□ -1.23
USP6NL-203ENST00000443016 MAP6Q96JE9 813 aa7.36□□□□□ -1.23
USP6NL-203ENST00000443016 MEGF10Q96KG7 1140 aa7.36□□□□□ -1.23
USP6NL-203ENST00000443016 SLC30A2Q9BRI3 323 aa7.36□□□□□ -1.23
USP6NL-203ENST00000443016 TMPRSS13Q9BYE2 586 aa7.36□□□□□ -1.23
USP6NL-203ENST00000443016 PATZ1Q9HBE1 687 aaKnown RBP7.36□□□□□ -1.23
USP6NL-203ENST00000443016 KLHDC2Q9Y2U9 406 aa7.36□□□□□ -1.23
USP6NL-203ENST00000443016 IQCF6A8MYZ5 107 aa7.36□□□□□ -1.23
USP6NL-203ENST00000443016 H0YL77 283 aa7.36□□□□□ -1.23
USP6NL-203ENST00000443016 TMEM178BH3BS89 294 aa7.36□□□□□ -1.23
USP6NL-203ENST00000443016 CYB5R3P00387 301 aaPredicted RBP7.36□□□□□ -1.23
USP6NL-203ENST00000443016 HSMCR30P0CW71 290 aa7.36□□□□□ -1.23
USP6NL-203ENST00000443016 HCCSP53701 268 aa7.36□□□□□ -1.23
USP6NL-203ENST00000443016 HABP2Q14520 560 aaPredicted RBP7.36□□□□□ -1.23
USP6NL-203ENST00000443016 RSPO1Q2MKA7 263 aaPredicted RBP7.36□□□□□ -1.23
USP6NL-203ENST00000443016 TP53I3Q53FA7 332 aa7.36□□□□□ -1.23
USP6NL-203ENST00000443016 LRRN1Q6UXK5 716 aa7.36□□□□□ -1.23
USP6NL-203ENST00000443016 COLCA1Q6ZS62 124 aa7.36□□□□□ -1.23
USP6NL-203ENST00000443016 C1orf87Q8N0U7 546 aa7.36□□□□□ -1.23
USP6NL-203ENST00000443016 C22orf15Q8WYQ4 148 aa7.36□□□□□ -1.23
USP6NL-203ENST00000443016 MOB1AQ9H8S9 216 aa7.36□□□□□ -1.23
USP6NL-203ENST00000443016 ISYNA1Q9NPH2 558 aa7.36□□□□□ -1.23
USP6NL-203ENST00000443016 DDX28Q9NUL7 540 aaKnown RBP7.36□□□□□ -1.23
USP6NL-203ENST00000443016 CLEC2DQ9UHP7 191 aa7.36□□□□□ -1.23
USP6NL-203ENST00000443016 MLNRO43193 412 aa7.35□□□□□ -1.23
USP6NL-203ENST00000443016 VENTXO95231 258 aa7.35□□□□□ -1.23
USP6NL-203ENST00000443016 PTBP3O95758 552 aaKnown RBP7.35□□□□□ -1.23
USP6NL-203ENST00000443016 FPR2P25090 351 aa7.35□□□□□ -1.23
USP6NL-203ENST00000443016 ZFP36P26651 326 aaKnown RBP7.35□□□□□ -1.23
USP6NL-203ENST00000443016 DCTDP32321 178 aa7.35□□□□□ -1.23
USP6NL-203ENST00000443016 RPL5P46777 297 aaKnown RBP7.35□□□□□ -1.23
USP6NL-203ENST00000443016 PRKXP51817 358 aa7.35□□□□□ -1.23
USP6NL-203ENST00000443016 ACTG1P63261 375 aa7.35□□□□□ -1.23
USP6NL-203ENST00000443016 MLLT11Q13015 90 aaPredicted RBP7.35□□□□□ -1.23
USP6NL-203ENST00000443016 OR2G6Q5TZ20 316 aa7.35□□□□□ -1.23
USP6NL-203ENST00000443016 RBMS3Q6XE24 437 aaKnown RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms