RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 SPAG1Q07617 926 aa2.31□□□□□ -2.04
PFDN4-202ENST00000441080 THOC7Q6I9Y2 204 aaKnown RBP2.31□□□□□ -2.04
PFDN4-202ENST00000441080 ADM2Q7Z4H4 148 aa2.31□□□□□ -2.04
PFDN4-202ENST00000441080 CYB561A3Q8NBI2 242 aa2.31□□□□□ -2.04
PFDN4-202ENST00000441080 OR2M7Q8NG81 312 aa2.31□□□□□ -2.04
PFDN4-202ENST00000441080 ZNF420Q8TAQ5 688 aaPredicted RBP2.31□□□□□ -2.04
PFDN4-202ENST00000441080 TMEM234Q8WY98 164 aa2.31□□□□□ -2.04
PFDN4-202ENST00000441080 YIPF6Q96EC8 236 aa2.31□□□□□ -2.04
PFDN4-202ENST00000441080 TM2D3Q9BRN9 247 aa2.31□□□□□ -2.04
PFDN4-202ENST00000441080 MS4A8Q9BY19 250 aa2.31□□□□□ -2.04
PFDN4-202ENST00000441080 IL22Q9GZX6 179 aa2.31□□□□□ -2.04
PFDN4-202ENST00000441080 OR2AG1Q9H205 316 aa2.31□□□□□ -2.04
PFDN4-202ENST00000441080 ZMAT5Q9UDW3 170 aaKnown RBP2.31□□□□□ -2.04
PFDN4-202ENST00000441080 PSME2Q9UL46 239 aa2.31□□□□□ -2.04
PFDN4-202ENST00000441080 SLC22A7Q9Y694 548 aa2.31□□□□□ -2.04
PFDN4-202ENST00000441080 RPRD2Q5VT52 1461 aaKnown RBP2.31□□□□□ -2.04
PFDN4-202ENST00000441080 SCN4AP35499 1836 aa2.31□□□□□ -2.04
PFDN4-202ENST00000441080 HIVEP2P31629 2446 aa2.3□□□□□ -2.04
PFDN4-202ENST00000441080 TRAV8-4A0A0B4J246 113 aa2.3□□□□□ -2.04
PFDN4-202ENST00000441080 GOLGA6L4A6NEF3 574 aa2.3□□□□□ -2.04
PFDN4-202ENST00000441080 CENPXA8MT69 81 aa2.3□□□□□ -2.04
PFDN4-202ENST00000441080 KLHL2O95198 593 aa2.3□□□□□ -2.04
PFDN4-202ENST00000441080 NRASP01111 189 aa2.3□□□□□ -2.04
PFDN4-202ENST00000441080 HRASP01112 189 aa2.3□□□□□ -2.04
PFDN4-202ENST00000441080 KRASP01116 189 aa2.3□□□□□ -2.04
PFDN4-202ENST00000441080 P01737 135 aa2.3□□□□□ -2.04
PFDN4-202ENST00000441080 DAOAP59103 153 aa2.3□□□□□ -2.04
PFDN4-202ENST00000441080 C2orf54Q08AI8 447 aa2.3□□□□□ -2.04
PFDN4-202ENST00000441080 TRDNQ13061 729 aa2.3□□□□□ -2.04
PFDN4-202ENST00000441080 BIKQ13323 160 aa2.3□□□□□ -2.04
PFDN4-202ENST00000441080 FAM104BQ5XKR9 115 aa2.3□□□□□ -2.04
PFDN4-202ENST00000441080 ZFAND6Q6FIF0 208 aa2.3□□□□□ -2.04
PFDN4-202ENST00000441080 APOBEC3HQ6NTF7 200 aaKnown RBP2.3□□□□□ -2.04
PFDN4-202ENST00000441080 LRRC8AQ8IWT6 810 aa2.3□□□□□ -2.04
PFDN4-202ENST00000441080 ZCCHC24Q8N2G6 241 aaKnown RBP2.3□□□□□ -2.04
PFDN4-202ENST00000441080 OR8D1Q8WZ84 308 aa2.3□□□□□ -2.04
PFDN4-202ENST00000441080 GABRG3Q99928 467 aa2.3□□□□□ -2.04
PFDN4-202ENST00000441080 ARMC7Q9H6L4 198 aa2.3□□□□□ -2.04
PFDN4-202ENST00000441080 DDX18Q9NVP1 670 aaKnown RBP2.3□□□□□ -2.04
PFDN4-202ENST00000441080 TAS2R1Q9NYW7 299 aa2.3□□□□□ -2.04
PFDN4-202ENST00000441080 STX18Q9P2W9 335 aaKnown RBP2.3□□□□□ -2.04
PFDN4-202ENST00000441080 ZNF230Q9UIE0 474 aaPredicted RBP2.3□□□□□ -2.04
PFDN4-202ENST00000441080 CARHSP1Q9Y2V2 147 aaKnown RBP2.3□□□□□ -2.04
PFDN4-202ENST00000441080 NPHP4O75161 1426 aaPredicted RBP2.29□□□□□ -2.04
PFDN4-202ENST00000441080 SMC2O95347 1197 aa2.29□□□□□ -2.04
PFDN4-202ENST00000441080 INAFM2P0DMQ5 153 aa2.29□□□□□ -2.04
PFDN4-202ENST00000441080 ZNF35P13682 527 aa2.29□□□□□ -2.04
PFDN4-202ENST00000441080 CCT6AP40227 531 aaKnown RBP2.29□□□□□ -2.04
PFDN4-202ENST00000441080 RGS6P49758 472 aa2.29□□□□□ -2.04
PFDN4-202ENST00000441080 BCAP31P51572 246 aa2.29□□□□□ -2.04
PFDN4-202ENST00000441080 ATP5G2Q06055 141 aa2.29□□□□□ -2.04
PFDN4-202ENST00000441080 OR2W3Q7Z3T1 314 aa2.29□□□□□ -2.04
PFDN4-202ENST00000441080 NT5DC3Q86UY8 548 aa2.29□□□□□ -2.04
PFDN4-202ENST00000441080 LRP11Q86VZ4 500 aa2.29□□□□□ -2.04
PFDN4-202ENST00000441080 TCP10LQ8TDR4 215 aa2.29□□□□□ -2.04
PFDN4-202ENST00000441080 BAALCQ8WXS3 180 aa2.29□□□□□ -2.04
PFDN4-202ENST00000441080 ZBED3Q96IU2 234 aaPredicted RBP2.29□□□□□ -2.04
PFDN4-202ENST00000441080 API5Q9BZZ5 524 aaKnown RBP2.29□□□□□ -2.04
PFDN4-202ENST00000441080 RGCCQ9H4X1 137 aa2.29□□□□□ -2.04
PFDN4-202ENST00000441080 SND1-IT1Q9HBX3 110 aa2.29□□□□□ -2.04
PFDN4-202ENST00000441080 ZNF492Q9P255 531 aa2.29□□□□□ -2.04
PFDN4-202ENST00000441080 RABL2AQ9UBK7 228 aaPredicted RBP2.29□□□□□ -2.04
PFDN4-202ENST00000441080 PEF1Q9UBV8 284 aaKnown RBP2.29□□□□□ -2.04
PFDN4-202ENST00000441080 KLF12Q9Y4X4 402 aa2.29□□□□□ -2.04
PFDN4-202ENST00000441080 SDK2Q58EX2 2172 aa2.29□□□□□ -2.04
PFDN4-202ENST00000441080 IGHV2OR16-5A0A0B4J2B6 119 aa2.28□□□□□ -2.04
PFDN4-202ENST00000441080 A0A1W2PRF3 423 aa2.28□□□□□ -2.04
PFDN4-202ENST00000441080 A0A1W2PRM7 423 aa2.28□□□□□ -2.04
PFDN4-202ENST00000441080 IZUMO1RA6ND01 250 aa2.28□□□□□ -2.04
PFDN4-202ENST00000441080 J3QT63 122 aa2.28□□□□□ -2.04
PFDN4-202ENST00000441080 ZNF701M0R085 212 aaPredicted RBP2.28□□□□□ -2.04
PFDN4-202ENST00000441080 FSTL3O95633 263 aa2.28□□□□□ -2.04
PFDN4-202ENST00000441080 HLA-GP17693 338 aa2.28□□□□□ -2.04
PFDN4-202ENST00000441080 CFHR2P36980 270 aa2.28□□□□□ -2.04
PFDN4-202ENST00000441080 PSMB2P49721 201 aa2.28□□□□□ -2.04
PFDN4-202ENST00000441080 LAMTOR4Q0VGL1 99 aa2.28□□□□□ -2.04
PFDN4-202ENST00000441080 DOC2AQ14183 400 aa2.28□□□□□ -2.04
PFDN4-202ENST00000441080 IHHQ14623 411 aa2.28□□□□□ -2.04
PFDN4-202ENST00000441080 DEFB134Q4QY38 66 aa2.28□□□□□ -2.04
PFDN4-202ENST00000441080 SLC35D2Q76EJ3 337 aa2.28□□□□□ -2.04
PFDN4-202ENST00000441080 TRMT10CQ7L0Y3 403 aaKnown RBP2.28□□□□□ -2.04
PFDN4-202ENST00000441080 OR5T3Q8NGG3 340 aa2.28□□□□□ -2.04
PFDN4-202ENST00000441080 NCOR1P1Q9H4R4 102 aa2.28□□□□□ -2.04
PFDN4-202ENST00000441080 TRIM45Q9H8W5 580 aaPredicted RBP2.28□□□□□ -2.04
PFDN4-202ENST00000441080 ZNF302Q9NR11 478 aa2.28□□□□□ -2.04
PFDN4-202ENST00000441080 ZNF586Q9NXT0 402 aa2.28□□□□□ -2.04
PFDN4-202ENST00000441080 TRIP11Q15643 1979 aa2.28□□□□□ -2.04
PFDN4-202ENST00000441080 BAZ2AQ9UIF9 1905 aaKnown RBP2.28□□□□□ -2.04
PFDN4-202ENST00000441080 SBNO1A3KN83 1393 aa2.27□□□□□ -2.05
PFDN4-202ENST00000441080 GOLGA6L7A0A1B0GV03 622 aa2.27□□□□□ -2.05
PFDN4-202ENST00000441080 HRES1P13985 223 aa2.27□□□□□ -2.05
PFDN4-202ENST00000441080 PEX19P40855 299 aa2.27□□□□□ -2.05
PFDN4-202ENST00000441080 HCCSP53701 268 aa2.27□□□□□ -2.05
PFDN4-202ENST00000441080 OR12D2P58182 307 aa2.27□□□□□ -2.05
PFDN4-202ENST00000441080 MEF2CQ06413 473 aaPredicted RBP2.27□□□□□ -2.05
PFDN4-202ENST00000441080 ST3GAL4Q11206 333 aa2.27□□□□□ -2.05
PFDN4-202ENST00000441080 CPTPQ5TA50 214 aa2.27□□□□□ -2.05
PFDN4-202ENST00000441080 KRTAP13-1Q8IUC0 172 aa2.27□□□□□ -2.05
PFDN4-202ENST00000441080 ZNF707Q96C28 371 aaPredicted RBP2.27□□□□□ -2.05
PFDN4-202ENST00000441080 DERL3Q96Q80 235 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 800.3 ms