RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 PPIAL4GP0DN37 164 aa11.38□□□□□ -0.59
LTBR-202ENST00000440421 SELLP14151 372 aa11.38□□□□□ -0.59
LTBR-202ENST00000440421 GABRB1P18505 474 aa11.38□□□□□ -0.59
LTBR-202ENST00000440421 CCL1P22362 96 aa11.38□□□□□ -0.59
LTBR-202ENST00000440421 KIR3DL2P43630 455 aa11.38□□□□□ -0.59
LTBR-202ENST00000440421 OR12D2P58182 307 aa11.38□□□□□ -0.59
LTBR-202ENST00000440421 ACTC1P68032 377 aa11.38□□□□□ -0.59
LTBR-202ENST00000440421 ACTA1P68133 377 aa11.38□□□□□ -0.59
LTBR-202ENST00000440421 ZNF91Q05481 1191 aa11.38□□□□□ -0.59
LTBR-202ENST00000440421 ZSCAN26Q16670 478 aa11.38□□□□□ -0.59
LTBR-202ENST00000440421 LRRC36Q1X8D7 754 aa11.38□□□□□ -0.59
LTBR-202ENST00000440421 TMEM42Q69YG0 159 aa11.38□□□□□ -0.59
LTBR-202ENST00000440421 RBMS3Q6XE24 437 aaKnown RBP11.38□□□□□ -0.59
LTBR-202ENST00000440421 PNLDC1Q8NA58 520 aaKnown RBP11.38□□□□□ -0.59
LTBR-202ENST00000440421 ZNF671Q8TAW3 534 aa11.38□□□□□ -0.59
LTBR-202ENST00000440421 AQP3Q92482 292 aa11.38□□□□□ -0.59
LTBR-202ENST00000440421 TMIGD2Q96BF3 282 aa11.38□□□□□ -0.59
LTBR-202ENST00000440421 C12orf43Q96C57 262 aaKnown RBP11.38□□□□□ -0.59
LTBR-202ENST00000440421 LGALS12Q96DT0 336 aa11.38□□□□□ -0.59
LTBR-202ENST00000440421 JMJD8Q96S16 334 aa11.38□□□□□ -0.59
LTBR-202ENST00000440421 ADI1Q9BV57 179 aa11.38□□□□□ -0.59
LTBR-202ENST00000440421 PLEKHA1Q9HB21 404 aa11.38□□□□□ -0.59
LTBR-202ENST00000440421 AMBNQ9NP70 447 aa11.38□□□□□ -0.59
LTBR-202ENST00000440421 ESM1Q9NQ30 184 aa11.38□□□□□ -0.59
LTBR-202ENST00000440421 FAM118AQ9NWS6 357 aa11.38□□□□□ -0.59
LTBR-202ENST00000440421 NLKQ9UBE8 527 aa11.38□□□□□ -0.59
LTBR-202ENST00000440421 LOC107986453A0A1B0GWG9 222 aa11.37□□□□□ -0.59
LTBR-202ENST00000440421 ANKRD61A6NGH8 418 aa11.37□□□□□ -0.59
LTBR-202ENST00000440421 NKX6-3A6NJ46 265 aa11.37□□□□□ -0.59
LTBR-202ENST00000440421 OR2AT4A6NND4 320 aa11.37□□□□□ -0.59
LTBR-202ENST00000440421 ZNF879B4DU55 563 aa11.37□□□□□ -0.59
LTBR-202ENST00000440421 SYNGR1O43759 233 aa11.37□□□□□ -0.59
LTBR-202ENST00000440421 MPZL2O60487 215 aa11.37□□□□□ -0.59
LTBR-202ENST00000440421 TOX4O94842 621 aa11.37□□□□□ -0.59
LTBR-202ENST00000440421 LIPFP07098 398 aa11.37□□□□□ -0.59
LTBR-202ENST00000440421 DBTP11182 482 aaKnown RBP11.37□□□□□ -0.59
LTBR-202ENST00000440421 HAAOP46952 286 aa11.37□□□□□ -0.59
LTBR-202ENST00000440421 GABRA2P47869 451 aa11.37□□□□□ -0.59
LTBR-202ENST00000440421 TGM4P49221 684 aa11.37□□□□□ -0.59
LTBR-202ENST00000440421 ISL1P61371 349 aa11.37□□□□□ -0.59
LTBR-202ENST00000440421 CDONQ4KMG0 1287 aa11.37□□□□□ -0.59
LTBR-202ENST00000440421 BRD3OSQ6XYD6 125 aa11.37□□□□□ -0.59
LTBR-202ENST00000440421 Q6ZSR3 168 aa11.37□□□□□ -0.59
LTBR-202ENST00000440421 RDH10Q8IZV5 341 aa11.37□□□□□ -0.59
LTBR-202ENST00000440421 ACBD7Q8N6N7 88 aa11.37□□□□□ -0.59
LTBR-202ENST00000440421 ZDHHC22Q8N966 263 aa11.37□□□□□ -0.59
LTBR-202ENST00000440421 RHOXF1Q8NHV9 184 aa11.37□□□□□ -0.59
LTBR-202ENST00000440421 TRMT10AQ8TBZ6 339 aaKnown RBP11.37□□□□□ -0.59
LTBR-202ENST00000440421 NPRL2Q8WTW4 380 aa11.37□□□□□ -0.59
LTBR-202ENST00000440421 RNF166Q96A37 237 aaPredicted RBP11.37□□□□□ -0.59
LTBR-202ENST00000440421 ZNF488Q96MN9 340 aa11.37□□□□□ -0.59
LTBR-202ENST00000440421 Q96MT0 163 aa11.37□□□□□ -0.59
LTBR-202ENST00000440421 ZNF48Q96MX3 618 aaPredicted RBP11.37□□□□□ -0.59
LTBR-202ENST00000440421 GAFA1Q96PS6 74 aa11.37□□□□□ -0.59
LTBR-202ENST00000440421 DUX5Q96PT3 197 aa11.37□□□□□ -0.59
LTBR-202ENST00000440421 SMPD3Q9NY59 655 aaPredicted RBP11.37□□□□□ -0.59
LTBR-202ENST00000440421 RPUSD1Q9UJJ7 312 aaKnown RBP11.37□□□□□ -0.59
LTBR-202ENST00000440421 EXOGQ9Y2C4 368 aaKnown RBP11.37□□□□□ -0.59
LTBR-202ENST00000440421 PCDHGB1Q9Y5G3 927 aa11.37□□□□□ -0.59
LTBR-202ENST00000440421 DNHD1Q96M86 4753 aa11.37□□□□□ -0.59
LTBR-202ENST00000440421 FAM230AA0A1W2PPH8 454 aa11.36□□□□□ -0.59
LTBR-202ENST00000440421 PQLC2LA1A4F0 135 aa11.36□□□□□ -0.59
LTBR-202ENST00000440421 DHRS7CA6NNS2 312 aa11.36□□□□□ -0.59
LTBR-202ENST00000440421 ANKRD65E5RJM6 399 aa11.36□□□□□ -0.59
LTBR-202ENST00000440421 J3QLW9 94 aa11.36□□□□□ -0.59
LTBR-202ENST00000440421 SLC16A6O15403 523 aa11.36□□□□□ -0.59
LTBR-202ENST00000440421 ECDO95905 644 aaPredicted RBP11.36□□□□□ -0.59
LTBR-202ENST00000440421 PLATP00750 562 aa11.36□□□□□ -0.59
LTBR-202ENST00000440421 ZNF19P17023 458 aa11.36□□□□□ -0.59
LTBR-202ENST00000440421 ARF6P62330 175 aa11.36□□□□□ -0.59
LTBR-202ENST00000440421 ACTG1P63261 375 aa11.36□□□□□ -0.59
LTBR-202ENST00000440421 DGUOKQ16854 277 aa11.36□□□□□ -0.59
LTBR-202ENST00000440421 LRRC10Q5BKY1 277 aa11.36□□□□□ -0.59
LTBR-202ENST00000440421 ATPAF1Q5TC12 328 aaPredicted RBP11.36□□□□□ -0.59
LTBR-202ENST00000440421 METTL11BQ5VVY1 283 aa11.36□□□□□ -0.59
LTBR-202ENST00000440421 LPCAT4Q643R3 524 aa11.36□□□□□ -0.59
LTBR-202ENST00000440421 ZNF788Q6ZQV5 615 aa11.36□□□□□ -0.59
LTBR-202ENST00000440421 LHFPL3Q86UP9 236 aa11.36□□□□□ -0.59
LTBR-202ENST00000440421 ZNF573Q86YE8 665 aa11.36□□□□□ -0.59
LTBR-202ENST00000440421 BATF2Q8N1L9 274 aa11.36□□□□□ -0.59
LTBR-202ENST00000440421 ZNF555Q8NEP9 628 aa11.36□□□□□ -0.59
LTBR-202ENST00000440421 OR2G2Q8NGZ5 317 aa11.36□□□□□ -0.59
LTBR-202ENST00000440421 ANGPTL6Q8NI99 470 aa11.36□□□□□ -0.59
LTBR-202ENST00000440421 H1FXQ92522 213 aaKnown RBP11.36□□□□□ -0.59
LTBR-202ENST00000440421 C4orf36Q96KX1 117 aa11.36□□□□□ -0.59
LTBR-202ENST00000440421 WDFY2Q96P53 400 aa11.36□□□□□ -0.59
LTBR-202ENST00000440421 TBX15Q96SF7 602 aa11.36□□□□□ -0.59
LTBR-202ENST00000440421 FRRS1LQ9P0K9 344 aa11.36□□□□□ -0.59
LTBR-202ENST00000440421 MYRFQ9Y2G1 1151 aa11.36□□□□□ -0.59
LTBR-202ENST00000440421 IGKV1D-17A0A075B6S4 117 aa11.35□□□□□ -0.59
LTBR-202ENST00000440421 MDFIC2A0A1B0GVS7 189 aa11.35□□□□□ -0.59
LTBR-202ENST00000440421 J3QT63 122 aa11.35□□□□□ -0.59
LTBR-202ENST00000440421 HTR1AP08908 422 aa11.35□□□□□ -0.59
LTBR-202ENST00000440421 UBCP0CG48 685 aaKnown RBP11.35□□□□□ -0.59
LTBR-202ENST00000440421 PSG2P11465 335 aa11.35□□□□□ -0.59
LTBR-202ENST00000440421 MMP9P14780 707 aa11.35□□□□□ -0.59
LTBR-202ENST00000440421 NANOS3P60323 173 aaKnown RBP11.35□□□□□ -0.59
LTBR-202ENST00000440421 IL13RA1P78552 427 aa11.35□□□□□ -0.59
LTBR-202ENST00000440421 BAMBIQ13145 260 aa11.35□□□□□ -0.59
LTBR-202ENST00000440421 RCN1Q15293 331 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms