RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 OR52A1Q9UKL2 312 aa16.41■□□□□ 0.22
SHROOM1-204ENST00000440118 PCDHGB1Q9Y5G3 927 aa16.41■□□□□ 0.22
SHROOM1-204ENST00000440118 SNX5Q9Y5X3 404 aa16.41■□□□□ 0.22
SHROOM1-204ENST00000440118 KPTNQ9Y664 436 aa16.41■□□□□ 0.22
SHROOM1-204ENST00000440118 IGHV1-69DA0A0B4J2H0 117 aa16.4■□□□□ 0.22
SHROOM1-204ENST00000440118 CENPVL3A0A0U1RRI6 287 aa16.4■□□□□ 0.22
SHROOM1-204ENST00000440118 A0A1W2PQ09 198 aa16.4■□□□□ 0.22
SHROOM1-204ENST00000440118 OR2AT4A6NND4 320 aa16.4■□□□□ 0.22
SHROOM1-204ENST00000440118 RHBDL1O75783 438 aa16.4■□□□□ 0.22
SHROOM1-204ENST00000440118 APOL3O95236 402 aa16.4■□□□□ 0.22
SHROOM1-204ENST00000440118 NRASP01111 189 aa16.4■□□□□ 0.22
SHROOM1-204ENST00000440118 IGHV1-69P01742 117 aa16.4■□□□□ 0.22
SHROOM1-204ENST00000440118 TTRP02766 147 aa16.4■□□□□ 0.22
SHROOM1-204ENST00000440118 CRYBA1P05813 215 aa16.4■□□□□ 0.22
SHROOM1-204ENST00000440118 SELLP14151 372 aa16.4■□□□□ 0.22
SHROOM1-204ENST00000440118 MMP9P14780 707 aa16.4■□□□□ 0.22
SHROOM1-204ENST00000440118 CAPZA1P52907 286 aa16.4■□□□□ 0.22
SHROOM1-204ENST00000440118 CDC42P60953 191 aa16.4■□□□□ 0.22
SHROOM1-204ENST00000440118 VMO1Q7Z5L0 202 aa16.4■□□□□ 0.22
SHROOM1-204ENST00000440118 OR5A2Q8NGI9 324 aa16.4■□□□□ 0.22
SHROOM1-204ENST00000440118 RFKQ969G6 155 aa16.4■□□□□ 0.22
SHROOM1-204ENST00000440118 GABARAPL3Q9BY60 117 aa16.4■□□□□ 0.22
SHROOM1-204ENST00000440118 OR51I2Q9H344 312 aa16.4■□□□□ 0.22
SHROOM1-204ENST00000440118 NOX4Q9NPH5 578 aa16.4■□□□□ 0.22
SHROOM1-204ENST00000440118 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.4■□□□□ 0.22
SHROOM1-204ENST00000440118 HTR1FP30939 366 aa16.39■□□□□ 0.21
SHROOM1-204ENST00000440118 ODF4Q2M2E3 257 aa16.39■□□□□ 0.21
SHROOM1-204ENST00000440118 SMIM21Q3B7S5 101 aa16.39■□□□□ 0.21
SHROOM1-204ENST00000440118 FAM76BQ5HYJ3 339 aa16.39■□□□□ 0.21
SHROOM1-204ENST00000440118 C16orf87Q6PH81 154 aa16.39■□□□□ 0.21
SHROOM1-204ENST00000440118 FAM220AQ7Z4H9 259 aa16.39■□□□□ 0.21
SHROOM1-204ENST00000440118 TMEM185AQ8NFB2 350 aa16.39■□□□□ 0.21
SHROOM1-204ENST00000440118 OR8J1Q8NGP2 316 aa16.39■□□□□ 0.21
SHROOM1-204ENST00000440118 PPP1R14AQ96A00 147 aa16.39■□□□□ 0.21
SHROOM1-204ENST00000440118 GAFA1Q96PS6 74 aa16.39■□□□□ 0.21
SHROOM1-204ENST00000440118 OSBPL10Q9BXB5 764 aa16.39■□□□□ 0.21
SHROOM1-204ENST00000440118 SIRT7Q9NRC8 400 aa16.39■□□□□ 0.21
SHROOM1-204ENST00000440118 GPR173Q9NS66 373 aa16.39■□□□□ 0.21
SHROOM1-204ENST00000440118 MRM2Q9UI43 246 aaKnown RBP16.39■□□□□ 0.21
SHROOM1-204ENST00000440118 FCN3O75636 299 aa16.38■□□□□ 0.21
SHROOM1-204ENST00000440118 TFF1P04155 84 aa16.38■□□□□ 0.21
SHROOM1-204ENST00000440118 EEF1B2P24534 225 aaKnown RBP16.38■□□□□ 0.21
SHROOM1-204ENST00000440118 CLVS2Q5SYC1 327 aa16.38■□□□□ 0.21
SHROOM1-204ENST00000440118 ATPAF1Q5TC12 328 aaPredicted RBP16.38■□□□□ 0.21
SHROOM1-204ENST00000440118 ELMOD2Q8IZ81 293 aa16.38■□□□□ 0.21
SHROOM1-204ENST00000440118 ANGPTL6Q8NI99 470 aa16.38■□□□□ 0.21
SHROOM1-204ENST00000440118 DCTN5Q9BTE1 182 aa16.38■□□□□ 0.21
SHROOM1-204ENST00000440118 ADI1Q9BV57 179 aa16.38■□□□□ 0.21
SHROOM1-204ENST00000440118 FAM96BQ9Y3D0 163 aa16.38■□□□□ 0.21
SHROOM1-204ENST00000440118 SIGLEC5O15389 551 aa16.37■□□□□ 0.21
SHROOM1-204ENST00000440118 IGLV3-1P01715 115 aa16.37■□□□□ 0.21
SHROOM1-204ENST00000440118 OR2T7P0C7T2 308 aa16.37■□□□□ 0.21
SHROOM1-204ENST00000440118 POLR2IP36954 125 aaKnown RBP16.37■□□□□ 0.21
SHROOM1-204ENST00000440118 HAAOP46952 286 aa16.37■□□□□ 0.21
SHROOM1-204ENST00000440118 TGM4P49221 684 aa16.37■□□□□ 0.21
SHROOM1-204ENST00000440118 EFNB1P98172 346 aa16.37■□□□□ 0.21
SHROOM1-204ENST00000440118 BLMHQ13867 455 aa16.37■□□□□ 0.21
SHROOM1-204ENST00000440118 Q6YL49 198 aa16.37■□□□□ 0.21
SHROOM1-204ENST00000440118 ZNF788Q6ZQV5 615 aa16.37■□□□□ 0.21
SHROOM1-204ENST00000440118 ASRGL1Q7L266 308 aa16.37■□□□□ 0.21
SHROOM1-204ENST00000440118 ZNF573Q86YE8 665 aa16.37■□□□□ 0.21
SHROOM1-204ENST00000440118 KIR3DL3Q8N743 410 aa16.37■□□□□ 0.21
SHROOM1-204ENST00000440118 OR2T27Q8NH04 317 aa16.37■□□□□ 0.21
SHROOM1-204ENST00000440118 SGMS2Q8NHU3 365 aa16.37■□□□□ 0.21
SHROOM1-204ENST00000440118 SSMEM1Q8WWF3 244 aa16.37■□□□□ 0.21
SHROOM1-204ENST00000440118 AQP3Q92482 292 aa16.37■□□□□ 0.21
SHROOM1-204ENST00000440118 UNKLQ9H9P5 680 aaKnown RBP16.37■□□□□ 0.21
SHROOM1-204ENST00000440118 POLDIP2Q9Y2S7 368 aa16.37■□□□□ 0.21
SHROOM1-204ENST00000440118 CAB39Q9Y376 341 aaPredicted RBP16.37■□□□□ 0.21
SHROOM1-204ENST00000440118 A0A1W2PQL4 384 aaPredicted RBP16.36■□□□□ 0.21
SHROOM1-204ENST00000440118 H3BSH0 61 aa16.36■□□□□ 0.21
SHROOM1-204ENST00000440118 SRSF10O75494 262 aaKnown RBP16.36■□□□□ 0.21
SHROOM1-204ENST00000440118 MELTFP08582 738 aa16.36■□□□□ 0.21
SHROOM1-204ENST00000440118 ACAA1P09110 424 aaPredicted RBP16.36■□□□□ 0.21
SHROOM1-204ENST00000440118 GUCA2AQ02747 115 aa16.36■□□□□ 0.21
SHROOM1-204ENST00000440118 DGUOKQ16854 277 aa16.36■□□□□ 0.21
SHROOM1-204ENST00000440118 FIP1L1Q6UN15 594 aaKnown RBP16.36■□□□□ 0.21
SHROOM1-204ENST00000440118 SHISA2Q6UWI4 295 aa16.36■□□□□ 0.21
SHROOM1-204ENST00000440118 SSX6Q7RTT6 188 aa16.36■□□□□ 0.21
SHROOM1-204ENST00000440118 TBC1D15Q8TC07 691 aa16.36■□□□□ 0.21
SHROOM1-204ENST00000440118 ZNF747Q9BV97 191 aa16.36■□□□□ 0.21
SHROOM1-204ENST00000440118 RASL12Q9NYN1 266 aa16.36■□□□□ 0.21
SHROOM1-204ENST00000440118 GNG8Q9UK08 70 aa16.36■□□□□ 0.21
SHROOM1-204ENST00000440118 SLC22A13Q9Y226 551 aa16.36■□□□□ 0.21
SHROOM1-204ENST00000440118 A0A0U1RQK1 487 aa16.35■□□□□ 0.21
SHROOM1-204ENST00000440118 A6NIN4 97 aa16.35■□□□□ 0.21
SHROOM1-204ENST00000440118 METTL15A6NJ78 407 aa16.35■□□□□ 0.21
SHROOM1-204ENST00000440118 J3QT63 122 aa16.35■□□□□ 0.21
SHROOM1-204ENST00000440118 DLGAP1O14490 977 aa16.35■□□□□ 0.21
SHROOM1-204ENST00000440118 SYT7O43581 403 aa16.35■□□□□ 0.21
SHROOM1-204ENST00000440118 NXPH2O95156 264 aa16.35■□□□□ 0.21
SHROOM1-204ENST00000440118 PSG2P11465 335 aa16.35■□□□□ 0.21
SHROOM1-204ENST00000440118 AMY2BP19961 511 aa16.35■□□□□ 0.21
SHROOM1-204ENST00000440118 OMGP23515 440 aa16.35■□□□□ 0.21
SHROOM1-204ENST00000440118 CAV3P56539 151 aa16.35■□□□□ 0.21
SHROOM1-204ENST00000440118 TMED1Q13445 227 aa16.35■□□□□ 0.21
SHROOM1-204ENST00000440118 KPNB1Q14974 876 aaKnown RBP16.35■□□□□ 0.21
SHROOM1-204ENST00000440118 ZFP1Q6P2D0 407 aa16.35■□□□□ 0.21
SHROOM1-204ENST00000440118 FAM185AQ8N0U4 392 aa16.35■□□□□ 0.21
SHROOM1-204ENST00000440118 TMEM86BQ8N661 226 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms