RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 PPIAL4GP0DN37 164 aa19.93■□□□□ 0.78
CPNE1-217ENST00000439669 DBTP11182 482 aaKnown RBP19.93■□□□□ 0.78
CPNE1-217ENST00000439669 HILS1P60008 231 aa19.93■□□□□ 0.78
CPNE1-217ENST00000439669 FGF12P61328 243 aa19.93■□□□□ 0.78
CPNE1-217ENST00000439669 ISL1P61371 349 aa19.93■□□□□ 0.78
CPNE1-217ENST00000439669 RCN1Q15293 331 aa19.93■□□□□ 0.78
CPNE1-217ENST00000439669 CDONQ4KMG0 1287 aa19.93■□□□□ 0.78
CPNE1-217ENST00000439669 USP43Q70EL4 1123 aa19.93■□□□□ 0.78
CPNE1-217ENST00000439669 PRSS35Q8N3Z0 413 aa19.93■□□□□ 0.78
CPNE1-217ENST00000439669 RHOXF1Q8NHV9 184 aa19.93■□□□□ 0.78
CPNE1-217ENST00000439669 AQP3Q92482 292 aa19.93■□□□□ 0.78
CPNE1-217ENST00000439669 UPRTQ96BW1 309 aa19.93■□□□□ 0.78
CPNE1-217ENST00000439669 JMJD8Q96S16 334 aa19.93■□□□□ 0.78
CPNE1-217ENST00000439669 ZNF69Q9UC07 566 aa19.93■□□□□ 0.78
CPNE1-217ENST00000439669 EXOGQ9Y2C4 368 aaKnown RBP19.93■□□□□ 0.78
CPNE1-217ENST00000439669 MXRA5Q9NR99 2828 aa19.93■□□□□ 0.78
CPNE1-217ENST00000439669 LOC107986453A0A1B0GWG9 222 aa19.92■□□□□ 0.78
CPNE1-217ENST00000439669 UBCP0CG48 685 aaKnown RBP19.92■□□□□ 0.78
CPNE1-217ENST00000439669 KIR3DL2P43630 455 aa19.92■□□□□ 0.78
CPNE1-217ENST00000439669 OR12D2P58182 307 aa19.92■□□□□ 0.78
CPNE1-217ENST00000439669 IKZF1Q13422 519 aa19.92■□□□□ 0.78
CPNE1-217ENST00000439669 Q6ZSR3 168 aa19.92■□□□□ 0.78
CPNE1-217ENST00000439669 BTN2A1Q7KYR7 527 aa19.92■□□□□ 0.78
CPNE1-217ENST00000439669 KCTD20Q7Z5Y7 419 aa19.92■□□□□ 0.78
CPNE1-217ENST00000439669 FGFRL1Q8N441 504 aa19.92■□□□□ 0.78
CPNE1-217ENST00000439669 PNLDC1Q8NA58 520 aaKnown RBP19.92■□□□□ 0.78
CPNE1-217ENST00000439669 TMIGD2Q96BF3 282 aa19.92■□□□□ 0.78
CPNE1-217ENST00000439669 MRPL48Q96GC5 212 aaKnown RBP19.92■□□□□ 0.78
CPNE1-217ENST00000439669 RDH12Q96NR8 316 aa19.92■□□□□ 0.78
CPNE1-217ENST00000439669 MS4A7Q9GZW8 240 aaPredicted RBP19.92■□□□□ 0.78
CPNE1-217ENST00000439669 AMBNQ9NP70 447 aa19.92■□□□□ 0.78
CPNE1-217ENST00000439669 NLKQ9UBE8 527 aa19.92■□□□□ 0.78
CPNE1-217ENST00000439669 ANKRD61A6NGH8 418 aa19.91■□□□□ 0.78
CPNE1-217ENST00000439669 J3QLW9 94 aa19.91■□□□□ 0.78
CPNE1-217ENST00000439669 NDUFB3O43676 98 aa19.91■□□□□ 0.78
CPNE1-217ENST00000439669 FCN3O75636 299 aa19.91■□□□□ 0.78
CPNE1-217ENST00000439669 LIPFP07098 398 aa19.91■□□□□ 0.78
CPNE1-217ENST00000439669 IGHV4-38-2P0DP08 117 aa19.91■□□□□ 0.78
CPNE1-217ENST00000439669 ZNF19P17023 458 aa19.91■□□□□ 0.78
CPNE1-217ENST00000439669 HAAOP46952 286 aa19.91■□□□□ 0.78
CPNE1-217ENST00000439669 ACTA2P62736 377 aa19.91■□□□□ 0.78
CPNE1-217ENST00000439669 ACTG2P63267 376 aa19.91■□□□□ 0.78
CPNE1-217ENST00000439669 ZNF573Q86YE8 665 aa19.91■□□□□ 0.78
CPNE1-217ENST00000439669 CCDC54Q8NEL0 328 aa19.91■□□□□ 0.78
CPNE1-217ENST00000439669 OR2G2Q8NGZ5 317 aa19.91■□□□□ 0.78
CPNE1-217ENST00000439669 TRMT10AQ8TBZ6 339 aaKnown RBP19.91■□□□□ 0.78
CPNE1-217ENST00000439669 PQLC2LA1A4F0 135 aa19.9■□□□□ 0.78
CPNE1-217ENST00000439669 ANKRD65E5RJM6 399 aa19.9■□□□□ 0.78
CPNE1-217ENST00000439669 J3QT63 122 aa19.9■□□□□ 0.78
CPNE1-217ENST00000439669 ECDO95905 644 aaPredicted RBP19.9■□□□□ 0.78
CPNE1-217ENST00000439669 TFF1P04155 84 aa19.9■□□□□ 0.78
CPNE1-217ENST00000439669 HTR1AP08908 422 aa19.9■□□□□ 0.78
CPNE1-217ENST00000439669 SELLP14151 372 aa19.9■□□□□ 0.78
CPNE1-217ENST00000439669 AMY2BP19961 511 aa19.9■□□□□ 0.78
CPNE1-217ENST00000439669 LRRC10Q5BKY1 277 aa19.9■□□□□ 0.78
CPNE1-217ENST00000439669 LPCAT4Q643R3 524 aa19.9■□□□□ 0.78
CPNE1-217ENST00000439669 RBMS3Q6XE24 437 aaKnown RBP19.9■□□□□ 0.78
CPNE1-217ENST00000439669 RDH10Q8IZV5 341 aa19.9■□□□□ 0.78
CPNE1-217ENST00000439669 BCL6BQ8N143 479 aaPredicted RBP19.9■□□□□ 0.78
CPNE1-217ENST00000439669 NPRL2Q8WTW4 380 aa19.9■□□□□ 0.78
CPNE1-217ENST00000439669 C4orf36Q96KX1 117 aa19.9■□□□□ 0.78
CPNE1-217ENST00000439669 PCGF1Q9BSM1 259 aa19.9■□□□□ 0.78
CPNE1-217ENST00000439669 ALG8Q9BVK2 526 aa19.9■□□□□ 0.78
CPNE1-217ENST00000439669 DNTTIP1Q9H147 329 aa19.9■□□□□ 0.78
CPNE1-217ENST00000439669 OR2AT4A6NND4 320 aa19.89■□□□□ 0.77
CPNE1-217ENST00000439669 ZNF879B4DU55 563 aa19.89■□□□□ 0.77
CPNE1-217ENST00000439669 FADS2O95864 444 aaKnown RBP19.89■□□□□ 0.77
CPNE1-217ENST00000439669 PEX2P28328 305 aa19.89■□□□□ 0.77
CPNE1-217ENST00000439669 GABRA2P47869 451 aa19.89■□□□□ 0.77
CPNE1-217ENST00000439669 C11orf91Q3C1V1 193 aa19.89■□□□□ 0.77
CPNE1-217ENST00000439669 ATPAF1Q5TC12 328 aaPredicted RBP19.89■□□□□ 0.77
CPNE1-217ENST00000439669 METTL11BQ5VVY1 283 aa19.89■□□□□ 0.77
CPNE1-217ENST00000439669 LHFPL3Q86UP9 236 aa19.89■□□□□ 0.77
CPNE1-217ENST00000439669 SIGLECL1Q8N7X8 197 aa19.89■□□□□ 0.77
CPNE1-217ENST00000439669 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP19.89■□□□□ 0.77
CPNE1-217ENST00000439669 ANGPTL6Q8NI99 470 aa19.89■□□□□ 0.77
CPNE1-217ENST00000439669 APH1BQ8WW43 257 aa19.89■□□□□ 0.77
CPNE1-217ENST00000439669 RNF166Q96A37 237 aaPredicted RBP19.89■□□□□ 0.77
CPNE1-217ENST00000439669 MYCBPQ99417 103 aaPredicted RBP19.89■□□□□ 0.77
CPNE1-217ENST00000439669 RPUSD1Q9UJJ7 312 aaKnown RBP19.89■□□□□ 0.77
CPNE1-217ENST00000439669 SLC7A11Q9UPY5 501 aa19.89■□□□□ 0.77
CPNE1-217ENST00000439669 MYRFQ9Y2G1 1151 aa19.89■□□□□ 0.77
CPNE1-217ENST00000439669 POLDIP2Q9Y2S7 368 aa19.89■□□□□ 0.77
CPNE1-217ENST00000439669 RPL36Q9Y3U8 105 aaKnown RBP19.89■□□□□ 0.77
CPNE1-217ENST00000439669 FAM230AA0A1W2PPH8 454 aa19.88■□□□□ 0.77
CPNE1-217ENST00000439669 TRIM77I1YAP6 450 aa19.88■□□□□ 0.77
CPNE1-217ENST00000439669 SYNGR1O43759 233 aa19.88■□□□□ 0.77
CPNE1-217ENST00000439669 GATBO75879 557 aaKnown RBP19.88■□□□□ 0.77
CPNE1-217ENST00000439669 TOX4O94842 621 aa19.88■□□□□ 0.77
CPNE1-217ENST00000439669 SFTPBP07988 381 aa19.88■□□□□ 0.77
CPNE1-217ENST00000439669 TGM4P49221 684 aa19.88■□□□□ 0.77
CPNE1-217ENST00000439669 IL13RA1P78552 427 aa19.88■□□□□ 0.77
CPNE1-217ENST00000439669 TMEM244Q5VVB8 128 aa19.88■□□□□ 0.77
CPNE1-217ENST00000439669 ZNF788Q6ZQV5 615 aa19.88■□□□□ 0.77
CPNE1-217ENST00000439669 POC1AQ8NBT0 407 aa19.88■□□□□ 0.77
CPNE1-217ENST00000439669 ZFAND2BQ8WV99 257 aa19.88■□□□□ 0.77
CPNE1-217ENST00000439669 CYGBQ8WWM9 190 aa19.88■□□□□ 0.77
CPNE1-217ENST00000439669 MED30Q96HR3 178 aa19.88■□□□□ 0.77
CPNE1-217ENST00000439669 ZNF488Q96MN9 340 aa19.88■□□□□ 0.77
CPNE1-217ENST00000439669 GAFA1Q96PS6 74 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms