RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 COL19A1Q14993 1142 aa10.05□□□□□ -0.8
SCN4A-201ENST00000435607 OR4S2Q8NH73 311 aa10.05□□□□□ -0.8
SCN4A-201ENST00000435607 OR2A5Q96R48 311 aa10.05□□□□□ -0.8
SCN4A-201ENST00000435607 HSD3B7Q9H2F3 369 aa10.05□□□□□ -0.8
SCN4A-201ENST00000435607 NWD2Q9ULI1 1742 aa10.05□□□□□ -0.8
SCN4A-201ENST00000435607 VDAC1P21796 283 aa10.05□□□□□ -0.8
SCN4A-201ENST00000435607 HRH1P35367 487 aa10.05□□□□□ -0.8
SCN4A-201ENST00000435607 FOXF1Q12946 379 aa10.05□□□□□ -0.8
SCN4A-201ENST00000435607 AGERQ15109 404 aa10.05□□□□□ -0.8
SCN4A-201ENST00000435607 FFAR4Q5NUL3 377 aa10.05□□□□□ -0.8
SCN4A-201ENST00000435607 DUSP18Q8NEJ0 188 aa10.05□□□□□ -0.8
SCN4A-201ENST00000435607 RTN4IP1Q8WWV3 396 aaPredicted RBP10.05□□□□□ -0.8
SCN4A-201ENST00000435607 PARP12Q9H0J9 701 aaKnown RBP10.05□□□□□ -0.8
SCN4A-201ENST00000435607 SH2D2AQ9NP31 389 aa10.05□□□□□ -0.8
SCN4A-201ENST00000435607 ACER3Q9NUN7 267 aa10.05□□□□□ -0.8
SCN4A-201ENST00000435607 SS18L1O75177 396 aaPredicted RBP10.05□□□□□ -0.8
SCN4A-201ENST00000435607 PTGFRP43088 359 aa10.05□□□□□ -0.8
SCN4A-201ENST00000435607 SCGB1D4Q6XE38 83 aa10.05□□□□□ -0.8
SCN4A-201ENST00000435607 OR1B1Q8NGR6 318 aa10.05□□□□□ -0.8
SCN4A-201ENST00000435607 INSIG2Q9Y5U4 225 aa10.05□□□□□ -0.8
SCN4A-201ENST00000435607 SLC2A10O95528 541 aa10.05□□□□□ -0.8
SCN4A-201ENST00000435607 ALDOCP09972 364 aaKnown RBP10.05□□□□□ -0.8
SCN4A-201ENST00000435607 NAAAQ02083 359 aa10.05□□□□□ -0.8
SCN4A-201ENST00000435607 GAMTQ14353 236 aa10.05□□□□□ -0.8
SCN4A-201ENST00000435607 A0A0B4J293 547 aa10.05□□□□□ -0.8
SCN4A-201ENST00000435607 C21orf140B9A014 251 aa10.05□□□□□ -0.8
SCN4A-201ENST00000435607 ICMTO60725 284 aa10.05□□□□□ -0.8
SCN4A-201ENST00000435607 ACTL6AO96019 429 aa10.05□□□□□ -0.8
SCN4A-201ENST00000435607 MMP11P24347 488 aa10.05□□□□□ -0.8
SCN4A-201ENST00000435607 TAS2R60P59551 318 aa10.05□□□□□ -0.8
SCN4A-201ENST00000435607 LAMTOR1Q6IAA8 161 aa10.05□□□□□ -0.8
SCN4A-201ENST00000435607 LKAAEAR1Q8TD35 194 aa10.05□□□□□ -0.8
SCN4A-201ENST00000435607 LINC00052Q96N35 136 aa10.05□□□□□ -0.8
SCN4A-201ENST00000435607 TGIF2Q9GZN2 237 aa10.05□□□□□ -0.8
SCN4A-201ENST00000435607 SPAG17Q6Q759 2223 aa10.04□□□□□ -0.8
SCN4A-201ENST00000435607 LYZL6O75951 148 aa10.04□□□□□ -0.8
SCN4A-201ENST00000435607 PDGFAP04085 211 aa10.04□□□□□ -0.8
SCN4A-201ENST00000435607 CST9Q5W186 159 aa10.04□□□□□ -0.8
SCN4A-201ENST00000435607 FBXL6Q8N531 539 aa10.04□□□□□ -0.8
SCN4A-201ENST00000435607 VSIG4Q9Y279 399 aa10.04□□□□□ -0.8
SCN4A-201ENST00000435607 OR5B21A6NL26 309 aa10.04□□□□□ -0.8
SCN4A-201ENST00000435607 MLF1P58340 268 aa10.04□□□□□ -0.8
SCN4A-201ENST00000435607 HTRA4P83105 476 aaPredicted RBP10.04□□□□□ -0.8
SCN4A-201ENST00000435607 RHOUQ7L0Q8 258 aa10.04□□□□□ -0.8
SCN4A-201ENST00000435607 PTPMT1Q8WUK0 201 aaPredicted RBP10.04□□□□□ -0.8
SCN4A-201ENST00000435607 PACRGQ96M98 296 aaPredicted RBP10.04□□□□□ -0.8
SCN4A-201ENST00000435607 GPR78Q96P69 363 aa10.04□□□□□ -0.8
SCN4A-201ENST00000435607 CA6P23280 308 aa10.04□□□□□ -0.8
SCN4A-201ENST00000435607 GUSBP11Q6P575 273 aa10.04□□□□□ -0.8
SCN4A-201ENST00000435607 SYS1Q8N2H4 156 aa10.04□□□□□ -0.8
SCN4A-201ENST00000435607 COPS9Q8WXC6 57 aa10.04□□□□□ -0.8
SCN4A-201ENST00000435607 LRRC61Q9BV99 259 aa10.04□□□□□ -0.8
SCN4A-201ENST00000435607 PIK3C2AO00443 1686 aa10.04□□□□□ -0.8
SCN4A-201ENST00000435607 CCSO14618 274 aa10.04□□□□□ -0.8
SCN4A-201ENST00000435607 ZNF658BQ4V348 819 aaPredicted RBP10.04□□□□□ -0.8
SCN4A-201ENST00000435607 LSMEM1Q8N8F7 131 aa10.04□□□□□ -0.8
SCN4A-201ENST00000435607 PSG11Q9UQ72 335 aa10.04□□□□□ -0.8
SCN4A-201ENST00000435607 MYO7AQ13402 2215 aa10.04□□□□□ -0.8
SCN4A-201ENST00000435607 IGLV3-10A0A075B6K4 115 aa10.04□□□□□ -0.8
SCN4A-201ENST00000435607 TAPBPO15533 448 aa10.04□□□□□ -0.8
SCN4A-201ENST00000435607 GYPAP02724 150 aa10.04□□□□□ -0.8
SCN4A-201ENST00000435607 AMMECR1LQ6DCA0 310 aa10.04□□□□□ -0.8
SCN4A-201ENST00000435607 PET117Q6UWS5 81 aa10.04□□□□□ -0.8
SCN4A-201ENST00000435607 SLC35B4Q969S0 331 aa10.04□□□□□ -0.8
SCN4A-201ENST00000435607 PRDM14Q9GZV8 571 aa10.04□□□□□ -0.8
SCN4A-201ENST00000435607 PHIPQ8WWQ0 1821 aa10.04□□□□□ -0.8
SCN4A-201ENST00000435607 SPTY2D1-AS1A0A0U1RR47 76 aa10.04□□□□□ -0.8
SCN4A-201ENST00000435607 PRRT4C9JH25 899 aa10.04□□□□□ -0.8
SCN4A-201ENST00000435607 C3orf80F5H4A9 247 aa10.04□□□□□ -0.8
SCN4A-201ENST00000435607 KLKB1P03952 638 aa10.04□□□□□ -0.8
SCN4A-201ENST00000435607 ORM2P19652 201 aa10.04□□□□□ -0.8
SCN4A-201ENST00000435607 BCL3P20749 454 aa10.04□□□□□ -0.8
SCN4A-201ENST00000435607 HSD17B13Q7Z5P4 300 aaPredicted RBP10.04□□□□□ -0.8
SCN4A-201ENST00000435607 SYT8Q8NBV8 401 aa10.04□□□□□ -0.8
SCN4A-201ENST00000435607 ZNF552Q9H707 407 aaPredicted RBP10.04□□□□□ -0.8
SCN4A-201ENST00000435607 RICTORQ6R327 1708 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 A0A1B0GTQ1 180 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 PF4V1P10720 104 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 CD1BP29016 333 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 CD226Q15762 336 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 GUCA2BQ16661 112 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 Q6ZPB1 254 aaPredicted RBP10.03□□□□□ -0.8
SCN4A-201ENST00000435607 NKAIN4Q8IVV8 208 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 NUDT8Q8WV74 236 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 HGDQ93099 445 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 IL22RA2Q969J5 263 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 NPIPB6E9PJ23 425 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 ATXN7O15265 892 aaPredicted RBP10.03□□□□□ -0.8
SCN4A-201ENST00000435607 PRSS1P07477 247 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 SOX8P57073 446 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 ZNF596Q8TC21 504 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 RXFP4Q8TDU9 374 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 SPACA5Q96QH8 159 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 RAB40CQ96S21 281 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 RGPD8O14715 1765 aaPredicted RBP10.03□□□□□ -0.8
SCN4A-201ENST00000435607 B3GALT4O96024 378 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 SCGB1A1P11684 91 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 OR2T2Q6IF00 324 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 OR8I2Q8N0Y5 310 aa10.03□□□□□ -0.8
SCN4A-201ENST00000435607 SLC26A10Q8NG04 563 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 171.4 ms