RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 IGHV3OR16-9A0A0B4J2B5 98 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 IGHV2OR16-5A0A0B4J2B6 119 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 IGHV5-10-1A0A0J9YXX1 117 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 ANKRD20A5PA0PJZ0 165 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 TOR1AO14656 332 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 CALUO43852 315 aaPredicted RBP1.68□□□□□ -2.14
PTPN4-205ENST00000433888 GCM2O75603 506 aaPredicted RBP1.68□□□□□ -2.14
PTPN4-205ENST00000433888 REM1O75628 298 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 SEMA3DO95025 777 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 TTC4O95801 387 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 ADRA2AP08913 450 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 OR56A5P0C7T3 313 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 ZNF286BP0CG31 522 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 SLC35E2BP0CK96 405 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 OMGP23515 440 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 TEAD1P28347 426 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 PSMD7P51665 324 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 MNAT1P51948 309 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 GFERP55789 205 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 CMC4P56277 68 aaPredicted RBP1.68□□□□□ -2.14
PTPN4-205ENST00000433888 OR10A3P58181 314 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 OR12D2P58182 307 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 MTPNP58546 118 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 TAS2R31P59538 309 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 TAS2R60P59551 318 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 TPM4P67936 248 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 RPL18AQ02543 176 aaKnown RBP1.68□□□□□ -2.14
PTPN4-205ENST00000433888 PRKCDQ05655 676 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 DMC1Q14565 340 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 PMVKQ15126 192 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 PSG3Q16557 428 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 DEFB116Q30KQ4 102 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 LINC00483Q53H64 154 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 OR10J3Q5JRS4 329 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 HHATQ5VTY9 493 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 STEAP4Q687X5 459 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 Q6ZSR6 202 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 PCP2Q8IVA1 136 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 PGAM4Q8N0Y7 254 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 RNF10Q8N5U6 811 aaKnown RBP1.68□□□□□ -2.14
PTPN4-205ENST00000433888 DRAM1Q8N682 238 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 OR8G5Q8NG78 346 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 OR10G2Q8NGC3 310 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 OR10G4Q8NGN3 311 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 OR6K2Q8NGY2 324 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 COQ8AQ8NI60 647 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 ANGPTL6Q8NI99 470 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 RNASEH2CQ8TDP1 164 aaKnown RBP1.68□□□□□ -2.14
PTPN4-205ENST00000433888 C15orf40Q8WUR7 153 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 TMEM239Q8WW34 195 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 C22orf15Q8WYQ4 148 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 CPNE4Q96A23 557 aaPredicted RBP1.68□□□□□ -2.14
PTPN4-205ENST00000433888 ZNF382Q96SR6 550 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 TSNAXQ99598 290 aaKnown RBP1.68□□□□□ -2.14
PTPN4-205ENST00000433888 PDCD1LG2Q9BQ51 273 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 TIMM29Q9BSF4 260 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 MED10Q9BTT4 135 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 COA1Q9GZY4 146 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 CHMP4BQ9H444 224 aaKnown RBP1.68□□□□□ -2.14
PTPN4-205ENST00000433888 C6orf50Q9HD87 102 aa1.68□□□□□ -2.14
PTPN4-205ENST00000433888 NUP214P35658 2090 aaPredicted RBP1.68□□□□□ -2.14
PTPN4-205ENST00000433888 MAP3K19Q56UN5 1328 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 TNS2Q63HR2 1409 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 DOCK8Q8NF50 2099 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 CCL15-CCL14A0A0B4J2E2 113 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 SLC5A10A0PJK1 596 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 RBFOX3A6NFN3 312 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 E7EWF7 191 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 SGCEO43556 437 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 NDUFS5O43920 106 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 RAD1O60671 282 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 PSIP1O75475 530 aaKnown RBP1.67□□□□□ -2.14
PTPN4-205ENST00000433888 SLC22A5O76082 557 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 IGLV3-25P01717 112 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 TPM3P06753 285 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 SLC35G6P0C7Q6 338 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 GFAPP14136 432 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 APLNRP35414 380 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 P2RY2P41231 377 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 VSNL1P62760 191 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 LAMTOR4Q0VGL1 99 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 RAB31Q13636 194 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 COTL1Q14019 142 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 TRAM1Q15629 374 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 VAMP3Q15836 100 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 CCL15Q16663 113 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 NTM-AS1Q6ZSK4 140 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 Q6ZT83 130 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 SSX6Q7RTT6 188 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 CALHM1Q8IU99 346 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 ZNF695Q8IW36 515 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 SLC7A5P1Q8MH63 180 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 CA13Q8N1Q1 262 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 CCNYL1Q8N7R7 359 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 UBAC2Q8NBM4 344 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 C19orf18Q8NEA5 215 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 CIRBP-AS1Q8TBR5 109 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 DCAKDQ8WVC6 231 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 IFT81Q8WYA0 676 aa1.67□□□□□ -2.14
PTPN4-205ENST00000433888 S100PBPQ96BU1 408 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms