RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 C19orf18Q8NEA5 215 aa3.81□□□□□ -1.8
USP54-206ENST00000433394 OR10W1Q8NGF6 305 aa3.81□□□□□ -1.8
USP54-206ENST00000433394 OR9A2Q8NGT5 310 aa3.81□□□□□ -1.8
USP54-206ENST00000433394 OR10Z1Q8NGY1 313 aa3.81□□□□□ -1.8
USP54-206ENST00000433394 OR2T29Q8NH02 315 aa3.81□□□□□ -1.8
USP54-206ENST00000433394 SIKE1Q9BRV8 207 aa3.81□□□□□ -1.8
USP54-206ENST00000433394 TMEM175Q9BSA9 504 aa3.81□□□□□ -1.8
USP54-206ENST00000433394 OR2AG1Q9H205 316 aa3.81□□□□□ -1.8
USP54-206ENST00000433394 C1orf198Q9H425 327 aa3.81□□□□□ -1.8
USP54-206ENST00000433394 KIR3DX1Q9H7L2 352 aa3.81□□□□□ -1.8
USP54-206ENST00000433394 C6orf50Q9HD87 102 aa3.81□□□□□ -1.8
USP54-206ENST00000433394 VCX3AQ9NNX9 186 aa3.81□□□□□ -1.8
USP54-206ENST00000433394 ZNF355PQ9NSJ1 428 aa3.81□□□□□ -1.8
USP54-206ENST00000433394 SLC17A7Q9P2U7 560 aa3.81□□□□□ -1.8
USP54-206ENST00000433394 CES1P1Q9UKY3 287 aa3.81□□□□□ -1.8
USP54-206ENST00000433394 KDM3BQ7LBC6 1761 aa3.81□□□□□ -1.8
USP54-206ENST00000433394 DISP2A7MBM2 1401 aa3.8□□□□□ -1.8
USP54-206ENST00000433394 TNS2Q63HR2 1409 aa3.8□□□□□ -1.8
USP54-206ENST00000433394 IGLV4-60A0A075B6I1 120 aa3.8□□□□□ -1.8
USP54-206ENST00000433394 SMIM26A0A096LP01 95 aa3.8□□□□□ -1.8
USP54-206ENST00000433394 F8VZ95 297 aa3.8□□□□□ -1.8
USP54-206ENST00000433394 H7C2Y5 167 aa3.8□□□□□ -1.8
USP54-206ENST00000433394 NDUFS8O00217 210 aa3.8□□□□□ -1.8
USP54-206ENST00000433394 BPY2O14599 106 aa3.8□□□□□ -1.8
USP54-206ENST00000433394 MYL12BO14950 172 aa3.8□□□□□ -1.8
USP54-206ENST00000433394 FOXH1O75593 365 aa3.8□□□□□ -1.8
USP54-206ENST00000433394 REM1O75628 298 aa3.8□□□□□ -1.8
USP54-206ENST00000433394 S100A6P06703 90 aa3.8□□□□□ -1.8
USP54-206ENST00000433394 CISD3P0C7P0 127 aa3.8□□□□□ -1.8
USP54-206ENST00000433394 CFHR2P36980 270 aa3.8□□□□□ -1.8
USP54-206ENST00000433394 TAS2R60P59551 318 aa3.8□□□□□ -1.8
USP54-206ENST00000433394 CYP24A1Q07973 514 aa3.8□□□□□ -1.8
USP54-206ENST00000433394 C2orf54Q08AI8 447 aa3.8□□□□□ -1.8
USP54-206ENST00000433394 PIGHQ14442 188 aaPredicted RBP3.8□□□□□ -1.8
USP54-206ENST00000433394 RBMY1FQ15415 496 aaKnown RBP3.8□□□□□ -1.8
USP54-206ENST00000433394 STK11Q15831 433 aa3.8□□□□□ -1.8
USP54-206ENST00000433394 ATP6V1FQ16864 119 aa3.8□□□□□ -1.8
USP54-206ENST00000433394 CDKL3Q8IVW4 592 aaPredicted RBP3.8□□□□□ -1.8
USP54-206ENST00000433394 WDFY1Q8IWB7 410 aa3.8□□□□□ -1.8
USP54-206ENST00000433394 C15orf56Q8N910 161 aa3.8□□□□□ -1.8
USP54-206ENST00000433394 GPR26Q8NDV2 337 aa3.8□□□□□ -1.8
USP54-206ENST00000433394 OR10G2Q8NGC3 310 aa3.8□□□□□ -1.8
USP54-206ENST00000433394 OR1J4Q8NGS1 313 aa3.8□□□□□ -1.8
USP54-206ENST00000433394 OR1S1Q8NH92 325 aa3.8□□□□□ -1.8
USP54-206ENST00000433394 LILRB4Q8NHJ6 448 aa3.8□□□□□ -1.8
USP54-206ENST00000433394 NARS2Q96I59 477 aaKnown RBP3.8□□□□□ -1.8
USP54-206ENST00000433394 RNF170Q96K19 258 aa3.8□□□□□ -1.8
USP54-206ENST00000433394 EMC6Q9BV81 110 aa3.8□□□□□ -1.8
USP54-206ENST00000433394 API5Q9BZZ5 524 aaKnown RBP3.8□□□□□ -1.8
USP54-206ENST00000433394 HAUS4Q9H6D7 363 aa3.8□□□□□ -1.8
USP54-206ENST00000433394 C12orf10Q9HB07 376 aa3.8□□□□□ -1.8
USP54-206ENST00000433394 PRRC2AP48634 2157 aaKnown RBP3.8□□□□□ -1.8
USP54-206ENST00000433394 ZNF831Q5JPB2 1677 aa3.8□□□□□ -1.8
USP54-206ENST00000433394 RGS12O14924 1447 aa3.79□□□□□ -1.8
USP54-206ENST00000433394 N4BP2Q86UW6 1770 aaPredicted RBP3.79□□□□□ -1.8
USP54-206ENST00000433394 GSTTP1A0A1W2PQM5 241 aa3.79□□□□□ -1.8
USP54-206ENST00000433394 ZNF705GA8MUZ8 300 aaPredicted RBP3.79□□□□□ -1.8
USP54-206ENST00000433394 E7EWF7 191 aa3.79□□□□□ -1.8
USP54-206ENST00000433394 DFFAO00273 331 aa3.79□□□□□ -1.8
USP54-206ENST00000433394 RBFOX2O43251 390 aaKnown RBP eCLIP3.79□□□□□ -1.8
USP54-206ENST00000433394 GCGP01275 180 aa3.79□□□□□ -1.8
USP54-206ENST00000433394 IVDP26440 423 aa3.79□□□□□ -1.8
USP54-206ENST00000433394 APLNRP35414 380 aa3.79□□□□□ -1.8
USP54-206ENST00000433394 SLC35B1P78383 322 aa3.79□□□□□ -1.8
USP54-206ENST00000433394 CRADDP78560 199 aa3.79□□□□□ -1.8
USP54-206ENST00000433394 ST3GAL4Q11206 333 aa3.79□□□□□ -1.8
USP54-206ENST00000433394 TFDP3Q5H9I0 405 aa3.79□□□□□ -1.8
USP54-206ENST00000433394 BHLHA15Q7RTS1 189 aaPredicted RBP3.79□□□□□ -1.8
USP54-206ENST00000433394 UBALD2Q8IYN6 164 aa3.79□□□□□ -1.8
USP54-206ENST00000433394 ARRDC1Q8N5I2 433 aa3.79□□□□□ -1.8
USP54-206ENST00000433394 WDR31Q8NA23 367 aa3.79□□□□□ -1.8
USP54-206ENST00000433394 GATSQ8NAP1 163 aa3.79□□□□□ -1.8
USP54-206ENST00000433394 OR5AR1Q8NGP9 310 aa3.79□□□□□ -1.8
USP54-206ENST00000433394 ING5Q8WYH8 240 aa3.79□□□□□ -1.8
USP54-206ENST00000433394 LRRC45Q96CN5 670 aa3.79□□□□□ -1.8
USP54-206ENST00000433394 TBL1YQ9BQ87 522 aa3.79□□□□□ -1.8
USP54-206ENST00000433394 PRSS16Q9NQE7 514 aa3.79□□□□□ -1.8
USP54-206ENST00000433394 IL20Q9NYY1 176 aa3.79□□□□□ -1.8
USP54-206ENST00000433394 CICQ96RK0 1608 aaPredicted RBP3.79□□□□□ -1.8
USP54-206ENST00000433394 PXDNLA1KZ92 1463 aa3.79□□□□□ -1.8
USP54-206ENST00000433394 UBR2Q8IWV8 1755 aa3.79□□□□□ -1.8
USP54-206ENST00000433394 NDUFC2-KCTD14E9PQ53 114 aa3.78□□□□□ -1.8
USP54-206ENST00000433394 TNFRSF11BO00300 401 aa3.78□□□□□ -1.8
USP54-206ENST00000433394 PLEKHA8P1O95397 391 aa3.78□□□□□ -1.8
USP54-206ENST00000433394 TTC4O95801 387 aa3.78□□□□□ -1.8
USP54-206ENST00000433394 HLA-DQA1P01909 254 aa3.78□□□□□ -1.8
USP54-206ENST00000433394 RHOCP08134 193 aa3.78□□□□□ -1.8
USP54-206ENST00000433394 HSPD1P10809 573 aaKnown RBP3.78□□□□□ -1.8
USP54-206ENST00000433394 IL1RNP18510 177 aa3.78□□□□□ -1.8
USP54-206ENST00000433394 GGT2P36268 569 aa3.78□□□□□ -1.8
USP54-206ENST00000433394 LOXL1Q08397 574 aaPredicted RBP3.78□□□□□ -1.8
USP54-206ENST00000433394 SYCNQ0VAF6 134 aa3.78□□□□□ -1.8
USP54-206ENST00000433394 AADACL4Q5VUY2 407 aa3.78□□□□□ -1.8
USP54-206ENST00000433394 LGI3Q8N145 548 aa3.78□□□□□ -1.8
USP54-206ENST00000433394 OR4K5Q8NGD3 323 aa3.78□□□□□ -1.8
USP54-206ENST00000433394 UBALD1Q8TB05 177 aa3.78□□□□□ -1.8
USP54-206ENST00000433394 RXFP4Q8TDU9 374 aa3.78□□□□□ -1.8
USP54-206ENST00000433394 ZNF488Q96MN9 340 aa3.78□□□□□ -1.8
USP54-206ENST00000433394 ZNF285Q96NJ3 590 aa3.78□□□□□ -1.8
USP54-206ENST00000433394 VCX3BQ9H321 246 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms