RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 CCL13Q99616 98 aa4.82□□□□□ -1.64
HMGB3P24-201ENST00000433260 FGF23Q9GZV9 251 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P24-201ENST00000433260 ERVK13-1Q9NX77 482 aa4.82□□□□□ -1.64
HMGB3P24-201ENST00000433260 ERVK-18Q9QC07 812 aa4.82□□□□□ -1.64
HMGB3P24-201ENST00000433260 MIOXQ9UGB7 285 aa4.82□□□□□ -1.64
HMGB3P24-201ENST00000433260 ZNF391Q9UJN7 358 aa4.82□□□□□ -1.64
HMGB3P24-201ENST00000433260 V9GYS6 101 aa4.82□□□□□ -1.64
HMGB3P24-201ENST00000433260 LOC105371242A0A075B767 164 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 TRAV38-1A0A0B4J264 116 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 TRAV20A0A0B4J274 112 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 A0A1B0GW55 424 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 ANKRD61A6NGH8 418 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 OOEPA6NGQ2 149 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 PTGES3LE9PB15 166 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 H0YAE9 185 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 LGALS8O00214 317 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 CASQ2O14958 399 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 ADAM20O43506 726 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 FOXH1O75593 365 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 PTBP3O95758 552 aaKnown RBP4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 PLATP00750 562 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 SERPINA3P01011 423 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 DUX4L2P0CJ85 424 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 DUX4L3P0CJ86 424 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 DUX4L4P0CJ87 422 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 DUX4L5P0CJ88 424 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 DUX4L6P0CJ89 424 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 DUX4L7P0CJ90 424 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 LIMS3P0CW19 117 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 LIMS4P0CW20 117 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 CALCBP10092 127 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 SRD5A1P18405 259 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 HNF1AP20823 631 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 GLRA1P23415 457 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 HAAOP46952 286 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 GBX2P52951 348 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 RAB40BQ12829 278 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 IKZF1Q13422 519 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 ALKBH1Q13686 389 aaKnown RBP4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 GALEQ14376 348 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 UBE2V2Q15819 145 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 CLVS2Q5SYC1 327 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 OR2G6Q5TZ20 316 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 HAGHLQ6PII5 290 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 DUX4L9Q6RFH8 374 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 DCDC5Q6ZRR9 648 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 FAM90A1Q86YD7 464 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 C8orf59Q8N0T1 100 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 FGFRL1Q8N441 504 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 ZNF676Q8N7Q3 588 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 SETD9Q8NE22 299 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 OR8B3Q8NGG8 313 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 OR5A2Q8NGI9 324 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 OR2G2Q8NGZ5 317 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 OR10AC1Q8NH08 325 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 PELI1Q96FA3 418 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 MISP3Q96FF7 219 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 NEIL1Q96FI4 390 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 TMEM80Q96HE8 168 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 TECTBQ96PL2 329 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 OR8B2Q96RD0 313 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 SSBP3Q9BWW4 388 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 WDR13Q9H1Z4 485 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 VCXQ9H320 206 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 OR51I2Q9H344 312 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 MOB1AQ9H8S9 216 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 RNPEPL1Q9HAU8 725 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 PLEKHA1Q9HB21 404 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 C8orf4Q9NR00 106 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 TMEM160Q9NX00 188 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 CTSZQ9UBR2 303 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 DNAJB11Q9UBS4 358 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 DUX4Q9UBX2 424 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 LPAR3Q9UBY5 353 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 CLN8Q9UBY8 286 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 CLEC2DQ9UHP7 191 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 CDC42EP3Q9UKI2 254 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 SLC7A11Q9UPY5 501 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 HIVEP1P15822 2718 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 ACANP16112 2415 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 DOCK11Q5JSL3 2073 aa4.81□□□□□ -1.64
HMGB3P24-201ENST00000433260 ABCA1O95477 2261 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 IGHV3OR16-10A0A075B7F0 116 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 A0A0G2JMP0 313 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 TRBV2A0A0J9YWF9 115 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 A0A0X1KG70 313 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 LOC107986453A0A1B0GWG9 222 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 TMEM210A6NLX4 147 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 F5H0A9 414 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 DVL1O14640 695 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 TNFRSF13BO14836 293 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 NDUFB3O43676 98 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 SYNGR1O43759 233 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 XPNPEP2O43895 674 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 IFNA2P01563 188 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 OCM2P0CE71 109 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 OCMP0CE72 109 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 FAM157CP0CG43 387 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 ATP6V1B1P15313 513 aa4.8□□□□□ -1.64
HMGB3P24-201ENST00000433260 ZNF20P17024 532 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms