RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 THAP5Q7Z6K1 395 aa12.09□□□□□ -0.47
PRKDC-203ENST00000432581 MKXQ8IYA7 352 aa12.09□□□□□ -0.47
PRKDC-203ENST00000432581 DEFB107AQ8IZN7 70 aa12.09□□□□□ -0.47
PRKDC-203ENST00000432581 OR8B12Q8NGG6 310 aa12.09□□□□□ -0.47
PRKDC-203ENST00000432581 OR2T29Q8NH02 315 aa12.09□□□□□ -0.47
PRKDC-203ENST00000432581 OR51V1Q9H2C8 321 aa12.09□□□□□ -0.47
PRKDC-203ENST00000432581 YY1AP1Q9H869 796 aa12.09□□□□□ -0.47
PRKDC-203ENST00000432581 C19orf12Q9NSK7 152 aa12.09□□□□□ -0.47
PRKDC-203ENST00000432581 TAGLN3Q9UI15 199 aa12.09□□□□□ -0.47
PRKDC-203ENST00000432581 U3KQV3 271 aa12.09□□□□□ -0.47
PRKDC-203ENST00000432581 OR5B21A6NL26 309 aa12.08□□□□□ -0.48
PRKDC-203ENST00000432581 H3BN98 237 aa12.08□□□□□ -0.48
PRKDC-203ENST00000432581 SNX3O60493 162 aa12.08□□□□□ -0.48
PRKDC-203ENST00000432581 ATP6V1B2P21281 511 aa12.08□□□□□ -0.48
PRKDC-203ENST00000432581 LGALS4P56470 323 aa12.08□□□□□ -0.48
PRKDC-203ENST00000432581 RPL31P62899 125 aaKnown RBP12.08□□□□□ -0.48
PRKDC-203ENST00000432581 EMX1Q04741 257 aaPredicted RBP12.08□□□□□ -0.48
PRKDC-203ENST00000432581 GK3PQ14409 553 aa12.08□□□□□ -0.48
PRKDC-203ENST00000432581 SMIM21Q3B7S5 101 aa12.08□□□□□ -0.48
PRKDC-203ENST00000432581 HIST2H2BDQ6DRA6 164 aa12.08□□□□□ -0.48
PRKDC-203ENST00000432581 IQCF1Q8N6M8 205 aa12.08□□□□□ -0.48
PRKDC-203ENST00000432581 OR5A2Q8NGI9 324 aa12.08□□□□□ -0.48
PRKDC-203ENST00000432581 MRAPQ8TCY5 172 aa12.08□□□□□ -0.48
PRKDC-203ENST00000432581 AQP3Q92482 292 aa12.08□□□□□ -0.48
PRKDC-203ENST00000432581 CDCA4Q9BXL8 241 aa12.08□□□□□ -0.48
PRKDC-203ENST00000432581 FAM107BQ9H098 131 aa12.08□□□□□ -0.48
PRKDC-203ENST00000432581 VNN3Q9NY84 501 aa12.08□□□□□ -0.48
PRKDC-203ENST00000432581 A0A0U1RQV5 110 aa12.07□□□□□ -0.48
PRKDC-203ENST00000432581 ACOD1A6NK06 481 aa12.07□□□□□ -0.48
PRKDC-203ENST00000432581 VGLL3A8MV65 326 aa12.07□□□□□ -0.48
PRKDC-203ENST00000432581 PRR23D1E9PI22 279 aaPredicted RBP12.07□□□□□ -0.48
PRKDC-203ENST00000432581 SLC1A7O00341 560 aa12.07□□□□□ -0.48
PRKDC-203ENST00000432581 PRODHO43272 600 aa12.07□□□□□ -0.48
PRKDC-203ENST00000432581 CHST1O43916 411 aa12.07□□□□□ -0.48
PRKDC-203ENST00000432581 SELENOFO60613 162 aa12.07□□□□□ -0.48
PRKDC-203ENST00000432581 FBXO24O75426 580 aa12.07□□□□□ -0.48
PRKDC-203ENST00000432581 MTRF1O75570 445 aaKnown RBP12.07□□□□□ -0.48
PRKDC-203ENST00000432581 PRR23D2P0DMB1 279 aaPredicted RBP12.07□□□□□ -0.48
PRKDC-203ENST00000432581 ATP6V1B1P15313 513 aa12.07□□□□□ -0.48
PRKDC-203ENST00000432581 BMXP51813 675 aa12.07□□□□□ -0.48
PRKDC-203ENST00000432581 CEP78Q5JTW2 689 aa12.07□□□□□ -0.48
PRKDC-203ENST00000432581 Q8N2B8 174 aa12.07□□□□□ -0.48
PRKDC-203ENST00000432581 ZNF561Q8N587 486 aa12.07□□□□□ -0.48
PRKDC-203ENST00000432581 OR10G2Q8NGC3 310 aa12.07□□□□□ -0.48
PRKDC-203ENST00000432581 NKX3-1Q99801 234 aaPredicted RBP12.07□□□□□ -0.48
PRKDC-203ENST00000432581 NIPSNAP1Q9BPW8 284 aa12.07□□□□□ -0.48
PRKDC-203ENST00000432581 MUC13Q9H3R2 512 aa12.07□□□□□ -0.48
PRKDC-203ENST00000432581 NECAP2Q9NVZ3 263 aa12.07□□□□□ -0.48
PRKDC-203ENST00000432581 USE1Q9NZ43 259 aa12.07□□□□□ -0.48
PRKDC-203ENST00000432581 TCRBV5S2A0A599 114 aa12.06□□□□□ -0.48
PRKDC-203ENST00000432581 ARRDC5A6NEK1 342 aa12.06□□□□□ -0.48
PRKDC-203ENST00000432581 RFPL4AA6NLU0 287 aa12.06□□□□□ -0.48
PRKDC-203ENST00000432581 RFPL4AL1F8VTS6 287 aa12.06□□□□□ -0.48
PRKDC-203ENST00000432581 LOXL3P58215 753 aa12.06□□□□□ -0.48
PRKDC-203ENST00000432581 ERVFRD-1P60508 538 aa12.06□□□□□ -0.48
PRKDC-203ENST00000432581 RIPPLY1Q0D2K3 151 aa12.06□□□□□ -0.48
PRKDC-203ENST00000432581 NSUN5P1Q3KNT7 163 aa12.06□□□□□ -0.48
PRKDC-203ENST00000432581 FAM98BQ52LJ0 330 aaKnown RBP12.06□□□□□ -0.48
PRKDC-203ENST00000432581 ZBTB37Q5TC79 503 aa12.06□□□□□ -0.48
PRKDC-203ENST00000432581 TMEM200BQ69YZ2 307 aa12.06□□□□□ -0.48
PRKDC-203ENST00000432581 PLBD1Q6P4A8 553 aa12.06□□□□□ -0.48
PRKDC-203ENST00000432581 HAGHLQ6PII5 290 aaPredicted RBP12.06□□□□□ -0.48
PRKDC-203ENST00000432581 ACP7Q6ZNF0 438 aa12.06□□□□□ -0.48
PRKDC-203ENST00000432581 KRT77Q7Z794 578 aa12.06□□□□□ -0.48
PRKDC-203ENST00000432581 NDUFA11Q86Y39 141 aa12.06□□□□□ -0.48
PRKDC-203ENST00000432581 C11orf42Q8N5U0 333 aa12.06□□□□□ -0.48
PRKDC-203ENST00000432581 POC1AQ8NBT0 407 aa12.06□□□□□ -0.48
PRKDC-203ENST00000432581 OR4F17Q8NGA8 305 aa12.06□□□□□ -0.48
PRKDC-203ENST00000432581 PIFOQ8TCI5 191 aa12.06□□□□□ -0.48
PRKDC-203ENST00000432581 OR4F4Q96R69 305 aa12.06□□□□□ -0.48
PRKDC-203ENST00000432581 C1orf21Q9H246 121 aa12.06□□□□□ -0.48
PRKDC-203ENST00000432581 ZNF702PQ9H963 129 aa12.06□□□□□ -0.48
PRKDC-203ENST00000432581 ARL8BQ9NVJ2 186 aa12.06□□□□□ -0.48
PRKDC-203ENST00000432581 LAMP5Q9UJQ1 280 aa12.06□□□□□ -0.48
PRKDC-203ENST00000432581 FAM90A8PA6NJQ4 464 aa12.05□□□□□ -0.48
PRKDC-203ENST00000432581 GSC2O15499 205 aa12.05□□□□□ -0.48
PRKDC-203ENST00000432581 ALOX5APP20292 161 aa12.05□□□□□ -0.48
PRKDC-203ENST00000432581 COX7A1P24310 79 aa12.05□□□□□ -0.48
PRKDC-203ENST00000432581 PAX6P26367 422 aa12.05□□□□□ -0.48
PRKDC-203ENST00000432581 PRDX2P32119 198 aa12.05□□□□□ -0.48
PRKDC-203ENST00000432581 MNAT1P51948 309 aa12.05□□□□□ -0.48
PRKDC-203ENST00000432581 OXLD1Q5BKU9 147 aa12.05□□□□□ -0.48
PRKDC-203ENST00000432581 SLC35D3Q5M8T2 416 aa12.05□□□□□ -0.48
PRKDC-203ENST00000432581 PLCXD3Q63HM9 321 aa12.05□□□□□ -0.48
PRKDC-203ENST00000432581 LCN8Q6JVE9 175 aa12.05□□□□□ -0.48
PRKDC-203ENST00000432581 KCTD18Q6PI47 426 aaPredicted RBP12.05□□□□□ -0.48
PRKDC-203ENST00000432581 DEGS2Q6QHC5 323 aa12.05□□□□□ -0.48
PRKDC-203ENST00000432581 COMMD2Q86X83 199 aa12.05□□□□□ -0.48
PRKDC-203ENST00000432581 DHFR2Q86XF0 187 aa12.05□□□□□ -0.48
PRKDC-203ENST00000432581 CALHM1Q8IU99 346 aa12.05□□□□□ -0.48
PRKDC-203ENST00000432581 LYG1Q8N1E2 194 aa12.05□□□□□ -0.48
PRKDC-203ENST00000432581 ARHGAP24Q8N264 748 aa12.05□□□□□ -0.48
PRKDC-203ENST00000432581 GIPC3Q8TF64 312 aa12.05□□□□□ -0.48
PRKDC-203ENST00000432581 SGCDQ92629 289 aa12.05□□□□□ -0.48
PRKDC-203ENST00000432581 FOXRED1Q96CU9 486 aaPredicted RBP12.05□□□□□ -0.48
PRKDC-203ENST00000432581 R3HDM4Q96D70 268 aa12.05□□□□□ -0.48
PRKDC-203ENST00000432581 FEVQ99581 238 aa12.05□□□□□ -0.48
PRKDC-203ENST00000432581 SERTAD4Q9NUC0 356 aa12.05□□□□□ -0.48
PRKDC-203ENST00000432581 FAM206AQ9NX38 181 aa12.05□□□□□ -0.48
PRKDC-203ENST00000432581 PITPNC1Q9UKF7 332 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 181.7 ms