RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 IFNA7P01567 189 aa12.73□□□□□ -0.37
RFTN1-203ENST00000432519 IL2RAP01589 272 aa12.73□□□□□ -0.37
RFTN1-203ENST00000432519 ZNF806P0C7X5 589 aa12.73□□□□□ -0.37
RFTN1-203ENST00000432519 ZNF708P17019 499 aa12.73□□□□□ -0.37
RFTN1-203ENST00000432519 SPINK2P20155 84 aa12.73□□□□□ -0.37
RFTN1-203ENST00000432519 SNU13P55769 128 aaKnown RBP12.73□□□□□ -0.37
RFTN1-203ENST00000432519 GK2Q14410 553 aaPredicted RBP12.73□□□□□ -0.37
RFTN1-203ENST00000432519 AADACL3Q5VUY0 350 aa12.73□□□□□ -0.37
RFTN1-203ENST00000432519 C3P1Q6ZMU1 363 aa12.73□□□□□ -0.37
RFTN1-203ENST00000432519 ZDHHC22Q8N966 263 aa12.73□□□□□ -0.37
RFTN1-203ENST00000432519 PRRG4Q9BZD6 226 aa12.73□□□□□ -0.37
RFTN1-203ENST00000432519 WDR13Q9H1Z4 485 aa12.73□□□□□ -0.37
RFTN1-203ENST00000432519 SHANK1Q9Y566 2161 aa12.72□□□□□ -0.37
RFTN1-203ENST00000432519 OR5H14A6NHG9 310 aa12.72□□□□□ -0.37
RFTN1-203ENST00000432519 FAM25EA8MYX2 175 aa12.72□□□□□ -0.37
RFTN1-203ENST00000432519 APOC1P02654 83 aa12.72□□□□□ -0.37
RFTN1-203ENST00000432519 AMY2BP19961 511 aa12.72□□□□□ -0.37
RFTN1-203ENST00000432519 CCNOP22674 350 aa12.72□□□□□ -0.37
RFTN1-203ENST00000432519 RIPPLY1Q0D2K3 151 aa12.72□□□□□ -0.37
RFTN1-203ENST00000432519 ATXN7L3Q14CW9 347 aaPredicted RBP12.72□□□□□ -0.37
RFTN1-203ENST00000432519 BEX5Q5H9J7 111 aa12.72□□□□□ -0.37
RFTN1-203ENST00000432519 NHLRC3Q5JS37 347 aa12.72□□□□□ -0.37
RFTN1-203ENST00000432519 RNFT1Q5M7Z0 435 aa12.72□□□□□ -0.37
RFTN1-203ENST00000432519 RIF1Q5UIP0 2472 aaKnown RBP12.72□□□□□ -0.37
RFTN1-203ENST00000432519 JMJD6Q6NYC1 403 aaPredicted RBP12.72□□□□□ -0.37
RFTN1-203ENST00000432519 FAM109AQ8N4B1 249 aa12.72□□□□□ -0.37
RFTN1-203ENST00000432519 MITD1Q8WV92 249 aa12.72□□□□□ -0.37
RFTN1-203ENST00000432519 TM2D1Q9BX74 207 aa12.72□□□□□ -0.37
RFTN1-203ENST00000432519 MAB21L2Q9Y586 359 aa12.72□□□□□ -0.37
RFTN1-203ENST00000432519 IGKV3D-15A0A087WSY6 115 aa12.72□□□□□ -0.37
RFTN1-203ENST00000432519 hCG_38984A0A1B0GV85 526 aa12.72□□□□□ -0.37
RFTN1-203ENST00000432519 FIGNL2A6NMB9 653 aa12.72□□□□□ -0.37
RFTN1-203ENST00000432519 DHRS7CA6NNS2 312 aa12.72□□□□□ -0.37
RFTN1-203ENST00000432519 TEX46H3BTG2 121 aa12.72□□□□□ -0.37
RFTN1-203ENST00000432519 ATP1B3P54709 279 aa12.72□□□□□ -0.37
RFTN1-203ENST00000432519 RRADP55042 308 aa12.72□□□□□ -0.37
RFTN1-203ENST00000432519 PIGYQ3MUY2 71 aa12.72□□□□□ -0.37
RFTN1-203ENST00000432519 TMPRSS7Q7RTY8 843 aa12.72□□□□□ -0.37
RFTN1-203ENST00000432519 Q96M66 194 aa12.72□□□□□ -0.37
RFTN1-203ENST00000432519 S100A13Q99584 98 aa12.72□□□□□ -0.37
RFTN1-203ENST00000432519 FAAP24Q9BTP7 215 aa12.72□□□□□ -0.37
RFTN1-203ENST00000432519 ZNF292O60281 2723 aa12.72□□□□□ -0.37
RFTN1-203ENST00000432519 OR6C65A6NJZ3 312 aa12.71□□□□□ -0.37
RFTN1-203ENST00000432519 RFPL4AA6NLU0 287 aa12.71□□□□□ -0.37
RFTN1-203ENST00000432519 MPTX1A8MV57 137 aa12.71□□□□□ -0.37
RFTN1-203ENST00000432519 RFPL4AL1F8VTS6 287 aa12.71□□□□□ -0.37
RFTN1-203ENST00000432519 WISP2O76076 250 aa12.71□□□□□ -0.37
RFTN1-203ENST00000432519 SFTPBP07988 381 aa12.71□□□□□ -0.37
RFTN1-203ENST00000432519 MEOX1P50221 254 aa12.71□□□□□ -0.37
RFTN1-203ENST00000432519 PLGLB1Q02325 96 aa12.71□□□□□ -0.37
RFTN1-203ENST00000432519 AIMP2Q13155 320 aaKnown RBP12.71□□□□□ -0.37
RFTN1-203ENST00000432519 IKZF1Q13422 519 aa12.71□□□□□ -0.37
RFTN1-203ENST00000432519 PNLIPRP3Q17RR3 467 aa12.71□□□□□ -0.37
RFTN1-203ENST00000432519 ESCO2Q56NI9 601 aa12.71□□□□□ -0.37
RFTN1-203ENST00000432519 CLLU1Q5K131 121 aa12.71□□□□□ -0.37
RFTN1-203ENST00000432519 VAX1Q5SQQ9 334 aa12.71□□□□□ -0.37
RFTN1-203ENST00000432519 CLVS2Q5SYC1 327 aa12.71□□□□□ -0.37
RFTN1-203ENST00000432519 PPP1R1CQ8WVI7 109 aa12.71□□□□□ -0.37
RFTN1-203ENST00000432519 GSX2Q9BZM3 304 aa12.71□□□□□ -0.37
RFTN1-203ENST00000432519 MFFQ9GZY8 342 aa12.71□□□□□ -0.37
RFTN1-203ENST00000432519 ZNF701Q9NV72 531 aaPredicted RBP12.71□□□□□ -0.37
RFTN1-203ENST00000432519 ZNF629Q9UEG4 869 aaPredicted RBP12.71□□□□□ -0.37
RFTN1-203ENST00000432519 GPR132Q9UNW8 380 aa12.71□□□□□ -0.37
RFTN1-203ENST00000432519 ZNF250P15622 560 aa12.71□□□□□ -0.38
RFTN1-203ENST00000432519 P2RX3P56373 397 aa12.71□□□□□ -0.38
RFTN1-203ENST00000432519 SUPT4H1P63272 117 aaKnown RBP12.71□□□□□ -0.38
RFTN1-203ENST00000432519 TMEM42Q69YG0 159 aa12.71□□□□□ -0.38
RFTN1-203ENST00000432519 NUFIP2Q7Z417 695 aaKnown RBP12.71□□□□□ -0.38
RFTN1-203ENST00000432519 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.71□□□□□ -0.38
RFTN1-203ENST00000432519 CSNK2A3Q8NEV1 391 aa12.71□□□□□ -0.38
RFTN1-203ENST00000432519 RTBDNQ9BSG5 229 aaPredicted RBP12.71□□□□□ -0.38
RFTN1-203ENST00000432519 PDCD10Q9BUL8 212 aa12.71□□□□□ -0.38
RFTN1-203ENST00000432519 GHRLQ9UBU3 117 aa12.71□□□□□ -0.38
RFTN1-203ENST00000432519 AUP1Q9Y679 476 aa12.71□□□□□ -0.38
RFTN1-203ENST00000432519 PRR14LQ5THK1 2151 aa12.7□□□□□ -0.38
RFTN1-203ENST00000432519 FAM221AA4D161 298 aa12.7□□□□□ -0.38
RFTN1-203ENST00000432519 ARGFXA6NJG6 315 aa12.7□□□□□ -0.38
RFTN1-203ENST00000432519 EEF1E1-BLOC1S5C9J1V9 151 aa12.7□□□□□ -0.38
RFTN1-203ENST00000432519 NRASP01111 189 aa12.7□□□□□ -0.38
RFTN1-203ENST00000432519 CD8AP01732 235 aa12.7□□□□□ -0.38
RFTN1-203ENST00000432519 SP1P08047 785 aa12.7□□□□□ -0.38
RFTN1-203ENST00000432519 TBPP20226 339 aa12.7□□□□□ -0.38
RFTN1-203ENST00000432519 GLRA1P23415 457 aa12.7□□□□□ -0.38
RFTN1-203ENST00000432519 EIF3IQ13347 325 aaKnown RBP12.7□□□□□ -0.38
RFTN1-203ENST00000432519 CAMK2BQ13554 666 aa12.7□□□□□ -0.38
RFTN1-203ENST00000432519 SLC9A3R2Q15599 337 aa12.7□□□□□ -0.38
RFTN1-203ENST00000432519 TRIP6Q15654 476 aaKnown RBP12.7□□□□□ -0.38
RFTN1-203ENST00000432519 THOC7Q6I9Y2 204 aaKnown RBP12.7□□□□□ -0.38
RFTN1-203ENST00000432519 CALHM1Q8IU99 346 aa12.7□□□□□ -0.38
RFTN1-203ENST00000432519 MDS2Q8NDY4 140 aa12.7□□□□□ -0.38
RFTN1-203ENST00000432519 OR5H2Q8NGV7 314 aa12.7□□□□□ -0.38
RFTN1-203ENST00000432519 PIGCQ92535 297 aa12.7□□□□□ -0.38
RFTN1-203ENST00000432519 TMEM45BQ96B21 275 aa12.7□□□□□ -0.38
RFTN1-203ENST00000432519 DEFB127Q9H1M4 99 aa12.7□□□□□ -0.38
RFTN1-203ENST00000432519 LIME1Q9H400 295 aa12.7□□□□□ -0.38
RFTN1-203ENST00000432519 CPT2P23786 658 aa12.7□□□□□ -0.38
RFTN1-203ENST00000432519 DAZAP2Q15038 168 aaPredicted RBP12.7□□□□□ -0.38
RFTN1-203ENST00000432519 TOR2AQ5JU69 321 aa12.7□□□□□ -0.38
RFTN1-203ENST00000432519 ZNF546Q86UE3 836 aa12.7□□□□□ -0.38
RFTN1-203ENST00000432519 BHLHE23Q8NDY6 225 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms