RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 APOC4P55056 127 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 OR2B8PP59922 312 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 ESRRGP62508 458 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 APOFQ13790 326 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 TAL2Q16559 108 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 TPRG1LQ5T0D9 272 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 LPCAT4Q643R3 524 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 PVRIGQ6DKI7 326 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 ZFP1Q6P2D0 407 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 DHRS4L2Q6PKH6 230 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 SSX7Q7RTT5 188 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 SSX6Q7RTT6 188 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 SLC35F2Q8IXU6 374 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 KIR3DL3Q8N743 410 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 OR51D1Q8NGF3 324 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 OR51F2Q8NH61 342 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 ACER1Q8TDN7 264 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 OR8D1Q8WZ84 308 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 NDRG1Q92597 394 aaKnown RBP1.98□□□□□ -2.09
CLK1-204ENST00000432425 CCDC126Q96EE4 140 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 TMEM56Q96MV1 263 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 PFDN5Q99471 154 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 GPR22Q99680 433 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 DOK1Q99704 481 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 TMEM208Q9BTX3 173 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 DDA1Q9BW61 102 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 MRPS26Q9BYN8 205 aaKnown RBP1.98□□□□□ -2.09
CLK1-204ENST00000432425 YIPF3Q9GZM5 350 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 TLNRD1Q9H1K6 362 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 SPNS1Q9H2V7 528 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 MFSD1Q9H3U5 465 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 UBE2ZQ9H832 354 aaPredicted RBP1.98□□□□□ -2.09
CLK1-204ENST00000432425 RDH14Q9HBH5 336 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 CLN6Q9NWW5 311 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 LSM7Q9UK45 103 aaKnown RBP1.98□□□□□ -2.09
CLK1-204ENST00000432425 C14orf166Q9Y224 244 aaKnown RBP1.98□□□□□ -2.09
CLK1-204ENST00000432425 SNX24Q9Y343 169 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 NUBP2Q9Y5Y2 271 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 ALG5Q9Y673 324 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 ARL5AQ9Y689 179 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 MTCH2Q9Y6C9 303 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 TMEM56-RWDD3S4R434 201 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 ZNF532Q9HCE3 1301 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 WDR97A6NE52 1622 aa1.98□□□□□ -2.09
CLK1-204ENST00000432425 BICRAQ9NZM4 1560 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 GLYATL1P3A0A0U1RQE8 302 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 A0A1B0GW55 424 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 A6NDX4 124 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 SMIM9A6NGZ8 99 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 EFCAB9A8MZ26 197 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 HSD17B6O14756 317 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 NPIPB7O75200 414 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 ZNF324O75467 553 aaPredicted RBP1.97□□□□□ -2.09
CLK1-204ENST00000432425 FOXH1O75593 365 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 TTC4O95801 387 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 TYMSP04818 313 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 IFNA16P05015 189 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 CTSLP07711 333 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 H2BFMP0C1H6 154 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 ZDHHC11BP0C7U3 371 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 DUX4L2P0CJ85 424 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 DUX4L3P0CJ86 424 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 DUX4L5P0CJ88 424 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 DUX4L6P0CJ89 424 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 DUX4L7P0CJ90 424 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 LIPCP11150 499 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 AP2S1P53680 142 aaPredicted RBP1.97□□□□□ -2.09
CLK1-204ENST00000432425 VSX2P58304 361 aaPredicted RBP1.97□□□□□ -2.09
CLK1-204ENST00000432425 ZNF121P58317 390 aaPredicted RBP1.97□□□□□ -2.09
CLK1-204ENST00000432425 TAS2R41P59536 307 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 SNAP25P60880 206 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 OSTNP61366 133 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 HERVK_113P61574 105 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 PAFAH1B2P68402 229 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 RGS1Q08116 209 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 PRPSAP1Q14558 356 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 ATP6AP1Q15904 470 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 PGGHGQ32M88 737 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 TMEM176BQ3YBM2 270 aaPredicted RBP1.97□□□□□ -2.09
CLK1-204ENST00000432425 OR10J3Q5JRS4 329 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 RBM48Q5RL73 367 aaKnown RBP1.97□□□□□ -2.09
CLK1-204ENST00000432425 RPL13AP3Q6NVV1 102 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 MED27Q6P2C8 311 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 WDR74Q6RFH5 385 aaPredicted RBP1.97□□□□□ -2.09
CLK1-204ENST00000432425 DUX4L9Q6RFH8 374 aaPredicted RBP1.97□□□□□ -2.09
CLK1-204ENST00000432425 RNF165Q6ZSG1 346 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 TMEM179Q6ZVK1 233 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 TMED4Q7Z7H5 227 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 RIMKLAQ8IXN7 391 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 LGI3Q8N145 548 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 FAM71E2Q8N5Q1 922 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 CLDN22Q8N7P3 220 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 Q8N9W7 124 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 ZNF740Q8NDX6 193 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 OR1M1Q8NGA1 313 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 OR52H1Q8NGJ2 320 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 OR1S2Q8NGQ3 325 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 OR13D1Q8NGV5 346 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 OR6K2Q8NGY2 324 aa1.97□□□□□ -2.09
CLK1-204ENST00000432425 OR5AK3PQ8NH89 298 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms